RNA–Protein interactions for RNA: ENST00000526772.5

CTNND1-214, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-214ENST00000526772 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
CTNND1-214ENST00000526772 BECN1Q14457 450 aa8.66□□□□□ -1.02
CTNND1-214ENST00000526772 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
CTNND1-214ENST00000526772 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
CTNND1-214ENST00000526772 ITGAEP38570 1179 aa8.65□□□□□ -1.02
CTNND1-214ENST00000526772 ARXQ96QS3 562 aa8.65□□□□□ -1.02
CTNND1-214ENST00000526772 TAF7LQ5H9L4 462 aa8.64□□□□□ -1.03
CTNND1-214ENST00000526772 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-214ENST00000526772 HNRNPUQ00839 825 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTNND1-214ENST00000526772 MSNP26038 577 aaKnown RBP8.62□□□□□ -1.03
CTNND1-214ENST00000526772 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
CTNND1-214ENST00000526772 GOLGA6L22H0YM25 854 aa8.61□□□□□ -1.03
CTNND1-214ENST00000526772 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
CTNND1-214ENST00000526772 C14orf37Q86TY3 774 aa8.6□□□□□ -1.03
CTNND1-214ENST00000526772 CHAF1AQ13111 956 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-214ENST00000526772 GOLGA6L3A6NEY3 463 aa8.58□□□□□ -1.04
CTNND1-214ENST00000526772 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-214ENST00000526772 SALL2Q9Y467 1007 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-214ENST00000526772 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
CTNND1-214ENST00000526772 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
CTNND1-214ENST00000526772 MTERF4Q7Z6M4 381 aaKnown RBP8.58□□□□□ -1.04
CTNND1-214ENST00000526772 ZCCHC6Q5VYS8 1495 aaKnown RBP8.57□□□□□ -1.04
CTNND1-214ENST00000526772 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
CTNND1-214ENST00000526772 RRP9O43818 475 aaKnown RBP8.56□□□□□ -1.04
CTNND1-214ENST00000526772 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
CTNND1-214ENST00000526772 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
CTNND1-214ENST00000526772 GOLGA6L6A8MZA4 724 aa8.54□□□□□ -1.04
CTNND1-214ENST00000526772 DDX10Q13206 875 aaKnown RBP8.54□□□□□ -1.04
CTNND1-214ENST00000526772 TONSLQ96HA7 1378 aa8.54□□□□□ -1.04
CTNND1-214ENST00000526772 EEA1Q15075 1411 aa8.54□□□□□ -1.04
CTNND1-214ENST00000526772 FAM50AQ14320 339 aaKnown RBP8.53□□□□□ -1.04
CTNND1-214ENST00000526772 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
CTNND1-214ENST00000526772 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-214ENST00000526772 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
CTNND1-214ENST00000526772 GOLGA6L1Q8N7Z2 621 aa8.51□□□□□ -1.05
CTNND1-214ENST00000526772 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-214ENST00000526772 HSP90B1P14625 803 aaKnown RBP8.49□□□□□ -1.05
CTNND1-214ENST00000526772 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
CTNND1-214ENST00000526772 TPM2P07951 284 aa8.49□□□□□ -1.05
CTNND1-214ENST00000526772 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
CTNND1-214ENST00000526772 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
CTNND1-214ENST00000526772 ZMYND15Q9H091 742 aa8.47□□□□□ -1.05
CTNND1-214ENST00000526772 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
CTNND1-214ENST00000526772 GSE1Q14687 1217 aa8.47□□□□□ -1.05
CTNND1-214ENST00000526772 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-214ENST00000526772 ZNF771Q7L3S4 317 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-214ENST00000526772 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
CTNND1-214ENST00000526772 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
CTNND1-214ENST00000526772 MRS2Q9HD23 443 aa8.44□□□□□ -1.06
CTNND1-214ENST00000526772 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
CTNND1-214ENST00000526772 TNIKQ9UKE5 1360 aa8.43□□□□□ -1.06
CTNND1-214ENST00000526772 CEP162Q5TB80 1403 aa8.43□□□□□ -1.06
CTNND1-214ENST00000526772 KIAA2012Q0VF49 1180 aa8.43□□□□□ -1.06
CTNND1-214ENST00000526772 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
CTNND1-214ENST00000526772 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
CTNND1-214ENST00000526772 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
CTNND1-214ENST00000526772 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
CTNND1-214ENST00000526772 NRDCO43847 1150 aa8.41□□□□□ -1.06
CTNND1-214ENST00000526772 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-214ENST00000526772 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
CTNND1-214ENST00000526772 IRX6P78412 446 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-214ENST00000526772 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-214ENST00000526772 MYH16Q9H6N6 1097 aa8.4□□□□□ -1.06
CTNND1-214ENST00000526772 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
CTNND1-214ENST00000526772 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
CTNND1-214ENST00000526772 CLIP1P30622 1438 aa8.38□□□□□ -1.07
CTNND1-214ENST00000526772 RBM10P98175 930 aaKnown RBP8.38□□□□□ -1.07
CTNND1-214ENST00000526772 ARID3AQ99856 593 aa8.38□□□□□ -1.07
CTNND1-214ENST00000526772 EIF4G2P78344 907 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTNND1-214ENST00000526772 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
CTNND1-214ENST00000526772 IRX3P78415 501 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-214ENST00000526772 FAM13BQ9NYF5 915 aa8.35□□□□□ -1.07
CTNND1-214ENST00000526772 TEX35Q5T0J7 233 aa8.35□□□□□ -1.07
CTNND1-214ENST00000526772 AXDND1Q5T1B0 1012 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-214ENST00000526772 NEFHP12036 1026 aa8.33□□□□□ -1.08
CTNND1-214ENST00000526772 GPS2Q13227 327 aa8.33□□□□□ -1.08
CTNND1-214ENST00000526772 CWC15Q9P013 229 aaKnown RBP8.33□□□□□ -1.08
CTNND1-214ENST00000526772 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
CTNND1-214ENST00000526772 CLGNO14967 610 aa8.33□□□□□ -1.08
CTNND1-214ENST00000526772 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-214ENST00000526772 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
CTNND1-214ENST00000526772 HTATSF1O43719 755 aaKnown RBP8.32□□□□□ -1.08
CTNND1-214ENST00000526772 PDCL3Q9H2J4 239 aa8.32□□□□□ -1.08
CTNND1-214ENST00000526772 B4GALNT3Q6L9W6 998 aa8.32□□□□□ -1.08
CTNND1-214ENST00000526772 GBP4Q96PP9 640 aa8.32□□□□□ -1.08
CTNND1-214ENST00000526772 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-214ENST00000526772 WRNQ14191 1432 aaPredicted RBP eCLIP8.32□□□□□ -1.08
CTNND1-214ENST00000526772 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
CTNND1-214ENST00000526772 NAP1L2Q9ULW6 460 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-214ENST00000526772 CEP164Q9UPV0 1460 aa8.31□□□□□ -1.08
CTNND1-214ENST00000526772 RB1CC1Q8TDY2 1594 aa8.3□□□□□ -1.08
CTNND1-214ENST00000526772 FGD1P98174 961 aa8.29□□□□□ -1.08
CTNND1-214ENST00000526772 ZNF526Q8TF50 670 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-214ENST00000526772 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.081e-6■■■■□ 21.2
CTNND1-214ENST00000526772 WDR43Q15061 677 aaKnown RBP eCLIP8.27□□□□□ -1.093e-9■■■□□ 15.6
CTNND1-214ENST00000526772 MS4A1P11836 297 aa8.27□□□□□ -1.09
CTNND1-214ENST00000526772 DEF6Q9H4E7 631 aa8.26□□□□□ -1.09
CTNND1-214ENST00000526772 ZRSR1Q15695 479 aaKnown RBP8.26□□□□□ -1.09
CTNND1-214ENST00000526772 HSCBQ8IWL3 235 aa8.26□□□□□ -1.09
CTNND1-214ENST00000526772 CFAP44Q96MT7 982 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms