RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
SSH3-204ENST00000525913 KDM6BO15054 1643 aa13.06□□□□□ -0.32
SSH3-204ENST00000525913 TSPOAP1O95153 1857 aa13.05□□□□□ -0.32
SSH3-204ENST00000525913 NPM1P06748 294 aaKnown RBP eCLIP13.02□□□□□ -0.33
SSH3-204ENST00000525913 ADCY10Q96PN6 1610 aa13.01□□□□□ -0.33
SSH3-204ENST00000525913 WRNQ14191 1432 aaPredicted RBP eCLIP13□□□□□ -0.33
SSH3-204ENST00000525913 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
SSH3-204ENST00000525913 BIVM-ERCC5R4GMW8 1640 aa12.94□□□□□ -0.34
SSH3-204ENST00000525913 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
SSH3-204ENST00000525913 ADGRL1O94910 1474 aa12.93□□□□□ -0.34
SSH3-204ENST00000525913 TOP2BQ02880 1626 aa12.93□□□□□ -0.34
SSH3-204ENST00000525913 PPRC1Q5VV67 1664 aaKnown RBP12.92□□□□□ -0.34
SSH3-204ENST00000525913 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
SSH3-204ENST00000525913 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
SSH3-204ENST00000525913 GLI2P10070 1586 aa12.86□□□□□ -0.35
SSH3-204ENST00000525913 KIAA0586Q9BVV6 1533 aa12.84□□□□□ -0.35
SSH3-204ENST00000525913 PTPRGP23470 1445 aa12.81□□□□□ -0.36
SSH3-204ENST00000525913 ASXL2Q76L83 1435 aa12.81□□□□□ -0.36
SSH3-204ENST00000525913 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
SSH3-204ENST00000525913 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
SSH3-204ENST00000525913 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
SSH3-204ENST00000525913 IGF1RP08069 1367 aa12.78□□□□□ -0.36
SSH3-204ENST00000525913 CUL7Q14999 1698 aa12.77□□□□□ -0.36
SSH3-204ENST00000525913 MAP3K4Q9Y6R4 1608 aa12.77□□□□□ -0.37
SSH3-204ENST00000525913 EPRSP07814 1512 aaKnown RBP12.74□□□□□ -0.37
SSH3-204ENST00000525913 UHRF1BP1LA0JNW5 1464 aa12.74□□□□□ -0.37
SSH3-204ENST00000525913 TNIKQ9UKE5 1360 aa12.74□□□□□ -0.37
SSH3-204ENST00000525913 TTBK1Q5TCY1 1321 aaPredicted RBP12.74□□□□□ -0.37
SSH3-204ENST00000525913 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
SSH3-204ENST00000525913 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
SSH3-204ENST00000525913 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
SSH3-204ENST00000525913 CARMIL2Q6F5E8 1435 aa12.69□□□□□ -0.38
SSH3-204ENST00000525913 SUPT5HO00267 1087 aaKnown RBP12.67□□□□□ -0.38
SSH3-204ENST00000525913 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
SSH3-204ENST00000525913 ZCCHC11Q5TAX3 1644 aaKnown RBP12.66□□□□□ -0.38
SSH3-204ENST00000525913 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
SSH3-204ENST00000525913 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
SSH3-204ENST00000525913 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
SSH3-204ENST00000525913 KIF21BO75037 1637 aa12.62□□□□□ -0.39
SSH3-204ENST00000525913 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
SSH3-204ENST00000525913 WDR7Q9Y4E6 1490 aa12.59□□□□□ -0.39
SSH3-204ENST00000525913 ADAMTSL3P82987 1691 aa12.58□□□□□ -0.4
SSH3-204ENST00000525913 CD109Q6YHK3 1445 aa12.58□□□□□ -0.4
SSH3-204ENST00000525913 PTPRMP28827 1452 aa12.58□□□□□ -0.4
SSH3-204ENST00000525913 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
SSH3-204ENST00000525913 LMTK3Q96Q04 1460 aa12.57□□□□□ -0.4
SSH3-204ENST00000525913 UGGT2Q9NYU1 1516 aa12.56□□□□□ -0.4
SSH3-204ENST00000525913 KCNH8Q96L42 1107 aa12.55□□□□□ -0.4
SSH3-204ENST00000525913 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
SSH3-204ENST00000525913 ARAP3Q8WWN8 1544 aa12.53□□□□□ -0.4
SSH3-204ENST00000525913 KIAA0556O60303 1618 aa12.53□□□□□ -0.4
SSH3-204ENST00000525913 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
SSH3-204ENST00000525913 SOCS7O14512 581 aa12.49□□□□□ -0.41
SSH3-204ENST00000525913 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
SSH3-204ENST00000525913 ABCA8O94911 1581 aa12.47□□□□□ -0.41
SSH3-204ENST00000525913 CERKQ8TCT0 537 aa12.47□□□□□ -0.41
SSH3-204ENST00000525913 MADDQ8WXG6 1647 aa12.46□□□□□ -0.41
SSH3-204ENST00000525913 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
SSH3-204ENST00000525913 HSPA2P54652 639 aa12.45□□□□□ -0.42
SSH3-204ENST00000525913 RAPGEF2Q9Y4G8 1499 aa12.45□□□□□ -0.42
SSH3-204ENST00000525913 PHLDB1Q86UU1 1377 aa12.43□□□□□ -0.42
SSH3-204ENST00000525913 DISP3Q9P2K9 1392 aa12.41□□□□□ -0.42
SSH3-204ENST00000525913 RIMS1Q86UR5 1692 aaKnown RBP12.4□□□□□ -0.42
SSH3-204ENST00000525913 ABCA9Q8IUA7 1624 aa12.4□□□□□ -0.42
SSH3-204ENST00000525913 ATP10BO94823 1461 aa12.4□□□□□ -0.43
SSH3-204ENST00000525913 FRMPD1Q5SYB0 1578 aa12.39□□□□□ -0.43
SSH3-204ENST00000525913 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
SSH3-204ENST00000525913 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
SSH3-204ENST00000525913 NEO1Q92859 1461 aa12.36□□□□□ -0.43
SSH3-204ENST00000525913 GOLGA3Q08378 1498 aa12.35□□□□□ -0.43
SSH3-204ENST00000525913 SIGLEC1Q9BZZ2 1709 aa12.34□□□□□ -0.43
SSH3-204ENST00000525913 ARID3CA6NKF2 412 aa12.34□□□□□ -0.43
SSH3-204ENST00000525913 RICTORQ6R327 1708 aa12.32□□□□□ -0.44
SSH3-204ENST00000525913 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
SSH3-204ENST00000525913 STRCQ7RTU9 1775 aa12.3□□□□□ -0.44
SSH3-204ENST00000525913 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
SSH3-204ENST00000525913 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
SSH3-204ENST00000525913 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
SSH3-204ENST00000525913 DENND4BO75064 1496 aaPredicted RBP12.27□□□□□ -0.45
SSH3-204ENST00000525913 SPATA31D1Q6ZQQ2 1576 aa12.26□□□□□ -0.45
SSH3-204ENST00000525913 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
SSH3-204ENST00000525913 AKNAQ7Z591 1439 aa12.25□□□□□ -0.45
SSH3-204ENST00000525913 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
SSH3-204ENST00000525913 TTC37Q6PGP7 1564 aa12.25□□□□□ -0.45
SSH3-204ENST00000525913 FER1L4A9Z1Z3 1794 aa12.25□□□□□ -0.45
SSH3-204ENST00000525913 FANCAO15360 1455 aa12.24□□□□□ -0.45
SSH3-204ENST00000525913 SETD1BQ9UPS6 1966 aaKnown RBP12.24□□□□□ -0.45
SSH3-204ENST00000525913 ZMYM4Q5VZL5 1548 aa12.23□□□□□ -0.45
SSH3-204ENST00000525913 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
SSH3-204ENST00000525913 MLECQ14165 292 aa12.23□□□□□ -0.45
SSH3-204ENST00000525913 PREX1Q8TCU6 1659 aa12.22□□□□□ -0.45
SSH3-204ENST00000525913 CEBPAP49715 358 aaPredicted RBP12.22□□□□□ -0.45
SSH3-204ENST00000525913 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
SSH3-204ENST00000525913 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
SSH3-204ENST00000525913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
SSH3-204ENST00000525913 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
SSH3-204ENST00000525913 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
SSH3-204ENST00000525913 ZFYVE16Q7Z3T8 1539 aa12.2□□□□□ -0.46
SSH3-204ENST00000525913 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
SSH3-204ENST00000525913 MAGI2Q86UL8 1455 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms