RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 ATP1B4Q9UN42 357 aaPredicted RBP8.67□□□□□ -1.02
CTNND1-212ENST00000525902 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
CTNND1-212ENST00000525902 BECN1Q14457 450 aa8.66□□□□□ -1.02
CTNND1-212ENST00000525902 AEBP2Q6ZN18 517 aaPredicted RBP8.66□□□□□ -1.02
CTNND1-212ENST00000525902 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
CTNND1-212ENST00000525902 USP35Q9P2H5 1018 aa8.66□□□□□ -1.02
CTNND1-212ENST00000525902 ITGAEP38570 1179 aa8.65□□□□□ -1.02
CTNND1-212ENST00000525902 ARXQ96QS3 562 aa8.65□□□□□ -1.02
CTNND1-212ENST00000525902 TAF7LQ5H9L4 462 aa8.64□□□□□ -1.03
CTNND1-212ENST00000525902 ARID4BQ4LE39 1312 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-212ENST00000525902 HNRNPUQ00839 825 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTNND1-212ENST00000525902 MSNP26038 577 aaKnown RBP8.62□□□□□ -1.03
CTNND1-212ENST00000525902 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
CTNND1-212ENST00000525902 GOLGA6L22H0YM25 854 aa8.61□□□□□ -1.03
CTNND1-212ENST00000525902 MAP7D2Q96T17 732 aa8.61□□□□□ -1.03
CTNND1-212ENST00000525902 C14orf37Q86TY3 774 aa8.6□□□□□ -1.03
CTNND1-212ENST00000525902 CHAF1AQ13111 956 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-212ENST00000525902 GOLGA6L3A6NEY3 463 aa8.58□□□□□ -1.04
CTNND1-212ENST00000525902 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-212ENST00000525902 SALL2Q9Y467 1007 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-212ENST00000525902 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
CTNND1-212ENST00000525902 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
CTNND1-212ENST00000525902 MTERF4Q7Z6M4 381 aaKnown RBP8.58□□□□□ -1.04
CTNND1-212ENST00000525902 FANCIQ9NVI1 1328 aa8.56□□□□□ -1.04
CTNND1-212ENST00000525902 RRP9O43818 475 aaKnown RBP8.56□□□□□ -1.04
CTNND1-212ENST00000525902 TIMELESSQ9UNS1 1208 aa8.55□□□□□ -1.04
CTNND1-212ENST00000525902 CCER2I3L3R5 266 aa8.55□□□□□ -1.04
CTNND1-212ENST00000525902 GOLGA6L6A8MZA4 724 aa8.54□□□□□ -1.04
CTNND1-212ENST00000525902 DDX10Q13206 875 aaKnown RBP8.54□□□□□ -1.04
CTNND1-212ENST00000525902 TONSLQ96HA7 1378 aa8.54□□□□□ -1.04
CTNND1-212ENST00000525902 EEA1Q15075 1411 aa8.54□□□□□ -1.04
CTNND1-212ENST00000525902 FAM50AQ14320 339 aaKnown RBP8.53□□□□□ -1.04
CTNND1-212ENST00000525902 TAF3Q5VWG9 929 aa8.53□□□□□ -1.04
CTNND1-212ENST00000525902 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-212ENST00000525902 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
CTNND1-212ENST00000525902 GOLGA6L1Q8N7Z2 621 aa8.51□□□□□ -1.05
CTNND1-212ENST00000525902 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-212ENST00000525902 HSP90B1P14625 803 aaKnown RBP8.49□□□□□ -1.05
CTNND1-212ENST00000525902 SCRIBQ14160 1630 aa8.49□□□□□ -1.05
CTNND1-212ENST00000525902 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
CTNND1-212ENST00000525902 TPM2P07951 284 aa8.49□□□□□ -1.05
CTNND1-212ENST00000525902 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
CTNND1-212ENST00000525902 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
CTNND1-212ENST00000525902 ZMYND15Q9H091 742 aa8.47□□□□□ -1.05
CTNND1-212ENST00000525902 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
CTNND1-212ENST00000525902 GSE1Q14687 1217 aa8.47□□□□□ -1.05
CTNND1-212ENST00000525902 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-212ENST00000525902 RSF1Q96T23 1441 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-212ENST00000525902 ZNF771Q7L3S4 317 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-212ENST00000525902 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
CTNND1-212ENST00000525902 ABCC9O60706 1549 aa8.46□□□□□ -1.06
CTNND1-212ENST00000525902 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
CTNND1-212ENST00000525902 MRS2Q9HD23 443 aa8.44□□□□□ -1.06
CTNND1-212ENST00000525902 FAM9BQ8IZU0 186 aa8.44□□□□□ -1.06
CTNND1-212ENST00000525902 TNIKQ9UKE5 1360 aa8.43□□□□□ -1.06
CTNND1-212ENST00000525902 CEP162Q5TB80 1403 aa8.43□□□□□ -1.06
CTNND1-212ENST00000525902 KIAA2012Q0VF49 1180 aa8.43□□□□□ -1.06
CTNND1-212ENST00000525902 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
CTNND1-212ENST00000525902 RB1CC1Q8TDY2 1594 aa8.42□□□□□ -1.06
CTNND1-212ENST00000525902 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
CTNND1-212ENST00000525902 GOLGA3Q08378 1498 aa8.42□□□□□ -1.06
CTNND1-212ENST00000525902 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
CTNND1-212ENST00000525902 NRDCO43847 1150 aa8.41□□□□□ -1.06
CTNND1-212ENST00000525902 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-212ENST00000525902 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
CTNND1-212ENST00000525902 IRX6P78412 446 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-212ENST00000525902 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-212ENST00000525902 MYH16Q9H6N6 1097 aa8.4□□□□□ -1.06
CTNND1-212ENST00000525902 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
CTNND1-212ENST00000525902 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
CTNND1-212ENST00000525902 CLIP1P30622 1438 aa8.38□□□□□ -1.07
CTNND1-212ENST00000525902 RBM10P98175 930 aaKnown RBP8.38□□□□□ -1.07
CTNND1-212ENST00000525902 ARID3AQ99856 593 aa8.38□□□□□ -1.07
CTNND1-212ENST00000525902 EIF4G2P78344 907 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTNND1-212ENST00000525902 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
CTNND1-212ENST00000525902 IRX3P78415 501 aaPredicted RBP8.36□□□□□ -1.07
CTNND1-212ENST00000525902 FAM13BQ9NYF5 915 aa8.35□□□□□ -1.07
CTNND1-212ENST00000525902 TEX35Q5T0J7 233 aa8.35□□□□□ -1.07
CTNND1-212ENST00000525902 NACADO15069 1562 aa8.34□□□□□ -1.07
CTNND1-212ENST00000525902 AXDND1Q5T1B0 1012 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-212ENST00000525902 NEFHP12036 1026 aa8.33□□□□□ -1.08
CTNND1-212ENST00000525902 GPS2Q13227 327 aa8.33□□□□□ -1.08
CTNND1-212ENST00000525902 CWC15Q9P013 229 aaKnown RBP8.33□□□□□ -1.08
CTNND1-212ENST00000525902 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
CTNND1-212ENST00000525902 CLGNO14967 610 aa8.33□□□□□ -1.08
CTNND1-212ENST00000525902 PAXIP1Q6ZW49 1069 aaPredicted RBP8.33□□□□□ -1.08
CTNND1-212ENST00000525902 IL27Q8NEV9 243 aa8.33□□□□□ -1.08
CTNND1-212ENST00000525902 HTATSF1O43719 755 aaKnown RBP8.32□□□□□ -1.08
CTNND1-212ENST00000525902 PDCL3Q9H2J4 239 aa8.32□□□□□ -1.08
CTNND1-212ENST00000525902 B4GALNT3Q6L9W6 998 aa8.32□□□□□ -1.08
CTNND1-212ENST00000525902 GBP4Q96PP9 640 aa8.32□□□□□ -1.08
CTNND1-212ENST00000525902 BCL11BQ9C0K0 894 aaPredicted RBP8.32□□□□□ -1.08
CTNND1-212ENST00000525902 WRNQ14191 1432 aaPredicted RBP eCLIP8.32□□□□□ -1.08
CTNND1-212ENST00000525902 SSR1P43307 286 aaKnown RBP8.32□□□□□ -1.08
CTNND1-212ENST00000525902 NAP1L2Q9ULW6 460 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-212ENST00000525902 CEP164Q9UPV0 1460 aa8.31□□□□□ -1.08
CTNND1-212ENST00000525902 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.084e-7■□□□□ 8.4
CTNND1-212ENST00000525902 FGD1P98174 961 aa8.29□□□□□ -1.08
CTNND1-212ENST00000525902 ZNF526Q8TF50 670 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-212ENST00000525902 BCCIPQ9P287 314 aaKnown RBP eCLIP8.28□□□□□ -1.081e-6■■■■□ 21.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms