RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
CDC27-202ENST00000525495 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
CDC27-202ENST00000525495 SHROOM2Q13796 1616 aa20.25■□□□□ 0.83
CDC27-202ENST00000525495 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
CDC27-202ENST00000525495 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
CDC27-202ENST00000525495 KIAA0586Q9BVV6 1533 aa20.14■□□□□ 0.81
CDC27-202ENST00000525495 JPH4Q96JJ6 628 aa20.14■□□□□ 0.81
CDC27-202ENST00000525495 PRG4Q92954 1404 aaPredicted RBP20.13■□□□□ 0.81
CDC27-202ENST00000525495 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
CDC27-202ENST00000525495 MSH5O43196 834 aa20.09■□□□□ 0.81
CDC27-202ENST00000525495 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
CDC27-202ENST00000525495 IQGAP2Q13576 1575 aa20.03■□□□□ 0.8
CDC27-202ENST00000525495 PRXQ9BXM0 1461 aa20.02■□□□□ 0.8
CDC27-202ENST00000525495 CTTNBP2Q8WZ74 1663 aa19.96■□□□□ 0.79
CDC27-202ENST00000525495 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
CDC27-202ENST00000525495 CSRNP3Q8WYN3 585 aa19.94■□□□□ 0.78
CDC27-202ENST00000525495 EEA1Q15075 1411 aa19.93■□□□□ 0.78
CDC27-202ENST00000525495 DISP1Q96F81 1524 aa19.91■□□□□ 0.78
CDC27-202ENST00000525495 UGGT2Q9NYU1 1516 aa19.91■□□□□ 0.78
CDC27-202ENST00000525495 CARMIL2Q6F5E8 1435 aa19.9■□□□□ 0.78
CDC27-202ENST00000525495 TRHP20396 242 aaPredicted RBP19.89■□□□□ 0.77
CDC27-202ENST00000525495 FAM9AQ8IZU1 332 aaPredicted RBP19.89■□□□□ 0.77
CDC27-202ENST00000525495 ADCY10Q96PN6 1610 aa19.88■□□□□ 0.77
CDC27-202ENST00000525495 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
CDC27-202ENST00000525495 PTPRGP23470 1445 aa19.85■□□□□ 0.77
CDC27-202ENST00000525495 KIAA0556O60303 1618 aa19.85■□□□□ 0.77
CDC27-202ENST00000525495 TTBK1Q5TCY1 1321 aaPredicted RBP19.84■□□□□ 0.77
CDC27-202ENST00000525495 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
CDC27-202ENST00000525495 KIF21BO75037 1637 aa19.79■□□□□ 0.76
CDC27-202ENST00000525495 GOLGA3Q08378 1498 aa19.75■□□□□ 0.75
CDC27-202ENST00000525495 MAPKBP1O60336 1514 aa19.74■□□□□ 0.75
CDC27-202ENST00000525495 UACAQ9BZF9 1416 aa19.73■□□□□ 0.75
CDC27-202ENST00000525495 KIF13AQ9H1H9 1805 aa19.73■□□□□ 0.75
CDC27-202ENST00000525495 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
CDC27-202ENST00000525495 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
CDC27-202ENST00000525495 ABCC2Q92887 1545 aa19.72■□□□□ 0.75
CDC27-202ENST00000525495 SAMD9Q5K651 1589 aa19.69■□□□□ 0.74
CDC27-202ENST00000525495 PPP6R1Q9UPN7 881 aa19.67■□□□□ 0.74
CDC27-202ENST00000525495 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
CDC27-202ENST00000525495 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
CDC27-202ENST00000525495 P3H3Q8IVL6 736 aa19.66■□□□□ 0.74
CDC27-202ENST00000525495 ABCC10Q5T3U5 1492 aa19.65■□□□□ 0.74
CDC27-202ENST00000525495 DIP2BQ9P265 1576 aa19.65■□□□□ 0.74
CDC27-202ENST00000525495 KDM5BQ9UGL1 1544 aa19.64■□□□□ 0.74
CDC27-202ENST00000525495 ABCA8O94911 1581 aa19.64■□□□□ 0.73
CDC27-202ENST00000525495 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
CDC27-202ENST00000525495 ZCCHC11Q5TAX3 1644 aaKnown RBP19.63■□□□□ 0.73
CDC27-202ENST00000525495 FAM69CQ0P6D2 419 aa19.6■□□□□ 0.73
CDC27-202ENST00000525495 ASXL2Q76L83 1435 aa19.6■□□□□ 0.73
CDC27-202ENST00000525495 ADRA2BP18089 450 aa19.59■□□□□ 0.73
CDC27-202ENST00000525495 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.72
CDC27-202ENST00000525495 FHOD3Q2V2M9 1422 aa19.56■□□□□ 0.72
CDC27-202ENST00000525495 EFCAB5A4FU69 1503 aa19.54■□□□□ 0.72
CDC27-202ENST00000525495 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
CDC27-202ENST00000525495 TSPOAP1O95153 1857 aa19.51■□□□□ 0.71
CDC27-202ENST00000525495 GLI2P10070 1586 aa19.5■□□□□ 0.71
CDC27-202ENST00000525495 EPRSP07814 1512 aaKnown RBP19.48■□□□□ 0.71
CDC27-202ENST00000525495 ARID3CA6NKF2 412 aa19.48■□□□□ 0.71
CDC27-202ENST00000525495 WDR7Q9Y4E6 1490 aa19.48■□□□□ 0.71
CDC27-202ENST00000525495 ATP10BO94823 1461 aa19.47■□□□□ 0.71
CDC27-202ENST00000525495 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
CDC27-202ENST00000525495 NUP153P49790 1475 aaKnown RBP19.45■□□□□ 0.7
CDC27-202ENST00000525495 PPRC1Q5VV67 1664 aaKnown RBP19.44■□□□□ 0.7
CDC27-202ENST00000525495 MAP3K4Q9Y6R4 1608 aa19.43■□□□□ 0.7
CDC27-202ENST00000525495 KCNH8Q96L42 1107 aa19.38■□□□□ 0.69
CDC27-202ENST00000525495 FMN1Q68DA7 1419 aa19.35■□□□□ 0.69
CDC27-202ENST00000525495 KDM6BO15054 1643 aa19.35■□□□□ 0.69
CDC27-202ENST00000525495 CFAP43Q8NDM7 1665 aa19.34■□□□□ 0.69
CDC27-202ENST00000525495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
CDC27-202ENST00000525495 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
CDC27-202ENST00000525495 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
CDC27-202ENST00000525495 CD109Q6YHK3 1445 aa19.3■□□□□ 0.68
CDC27-202ENST00000525495 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
CDC27-202ENST00000525495 ABCA9Q8IUA7 1624 aa19.29■□□□□ 0.68
CDC27-202ENST00000525495 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
CDC27-202ENST00000525495 CLIP1P30622 1438 aa19.28■□□□□ 0.68
CDC27-202ENST00000525495 LRRIQ1Q96JM4 1722 aa19.28■□□□□ 0.68
CDC27-202ENST00000525495 MAGI3Q5TCQ9 1506 aa19.27■□□□□ 0.68
CDC27-202ENST00000525495 COL17A1Q9UMD9 1497 aaPredicted RBP19.26■□□□□ 0.67
CDC27-202ENST00000525495 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
CDC27-202ENST00000525495 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
CDC27-202ENST00000525495 PLEKHD1A6NEE1 506 aa19.23■□□□□ 0.67
CDC27-202ENST00000525495 LOC105371045A0A1W2PR82 267 aa19.21■□□□□ 0.67
CDC27-202ENST00000525495 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
CDC27-202ENST00000525495 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
CDC27-202ENST00000525495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.19■□□□□ 0.66
CDC27-202ENST00000525495 TTC37Q6PGP7 1564 aa19.18■□□□□ 0.66
CDC27-202ENST00000525495 FYCO1Q9BQS8 1478 aa19.16■□□□□ 0.66
CDC27-202ENST00000525495 KIF14Q15058 1648 aa19.13■□□□□ 0.65
CDC27-202ENST00000525495 CCDC18Q5T9S5 1454 aa19.13■□□□□ 0.65
CDC27-202ENST00000525495 ARAP3Q8WWN8 1544 aa19.12■□□□□ 0.65
CDC27-202ENST00000525495 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
CDC27-202ENST00000525495 TROQ12816 1431 aaPredicted RBP19.11■□□□□ 0.65
CDC27-202ENST00000525495 NEO1Q92859 1461 aa19.11■□□□□ 0.65
CDC27-202ENST00000525495 PHLDB1Q86UU1 1377 aa19.07■□□□□ 0.64
CDC27-202ENST00000525495 FANCAO15360 1455 aa19.06■□□□□ 0.64
CDC27-202ENST00000525495 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
CDC27-202ENST00000525495 PLCH2O75038 1416 aa19.04■□□□□ 0.64
CDC27-202ENST00000525495 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
CDC27-202ENST00000525495 FRMPD1Q5SYB0 1578 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms