RNA–Protein interactions for RNA: ENST00000525460.5

VAV3-209, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene VAV3, Length 1,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-209ENST00000525460 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
VAV3-209ENST00000525460 PRG4Q92954 1404 aaPredicted RBP13.51□□□□□ -0.25
VAV3-209ENST00000525460 MSH5O43196 834 aa13.5□□□□□ -0.25
VAV3-209ENST00000525460 JPH4Q96JJ6 628 aa13.5□□□□□ -0.25
VAV3-209ENST00000525460 TTBK1Q5TCY1 1321 aaPredicted RBP13.47□□□□□ -0.25
VAV3-209ENST00000525460 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
VAV3-209ENST00000525460 NPM1P06748 294 aaKnown RBP eCLIP13.43□□□□□ -0.26
VAV3-209ENST00000525460 KIF27Q86VH2 1401 aa13.43□□□□□ -0.26
VAV3-209ENST00000525460 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
VAV3-209ENST00000525460 IGF1RP08069 1367 aa13.41□□□□□ -0.26
VAV3-209ENST00000525460 FAM69CQ0P6D2 419 aa13.38□□□□□ -0.27
VAV3-209ENST00000525460 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
VAV3-209ENST00000525460 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
VAV3-209ENST00000525460 CUL7Q14999 1698 aa13.34□□□□□ -0.27
VAV3-209ENST00000525460 PTPRGP23470 1445 aa13.3□□□□□ -0.28
VAV3-209ENST00000525460 ADCY10Q96PN6 1610 aa13.3□□□□□ -0.28
VAV3-209ENST00000525460 KIF13AQ9H1H9 1805 aa13.29□□□□□ -0.28
VAV3-209ENST00000525460 CARMIL2Q6F5E8 1435 aa13.27□□□□□ -0.28
VAV3-209ENST00000525460 ABCC10Q5T3U5 1492 aa13.27□□□□□ -0.28
VAV3-209ENST00000525460 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
VAV3-209ENST00000525460 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
VAV3-209ENST00000525460 DIP2BQ9P265 1576 aa13.24□□□□□ -0.29
VAV3-209ENST00000525460 IQGAP2Q13576 1575 aa13.23□□□□□ -0.29
VAV3-209ENST00000525460 RAPGEF2Q9Y4G8 1499 aa13.21□□□□□ -0.29
VAV3-209ENST00000525460 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
VAV3-209ENST00000525460 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
VAV3-209ENST00000525460 KDM6BO15054 1643 aa13.17□□□□□ -0.3
VAV3-209ENST00000525460 ASXL2Q76L83 1435 aa13.17□□□□□ -0.3
VAV3-209ENST00000525460 UACAQ9BZF9 1416 aa13.17□□□□□ -0.3
VAV3-209ENST00000525460 DISP1Q96F81 1524 aa13.16□□□□□ -0.3
VAV3-209ENST00000525460 PLB1Q6P1J6 1458 aa13.12□□□□□ -0.31
VAV3-209ENST00000525460 KIAA0556O60303 1618 aa13.11□□□□□ -0.31
VAV3-209ENST00000525460 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
VAV3-209ENST00000525460 UHRF1BP1LA0JNW5 1464 aa13.1□□□□□ -0.31
VAV3-209ENST00000525460 ARID3CA6NKF2 412 aa13.1□□□□□ -0.31
VAV3-209ENST00000525460 P3H3Q8IVL6 736 aa13.1□□□□□ -0.31
VAV3-209ENST00000525460 RANGAP1P46060 587 aaPredicted RBP13.09□□□□□ -0.31
VAV3-209ENST00000525460 KCNH8Q96L42 1107 aa13.09□□□□□ -0.31
VAV3-209ENST00000525460 KDM4FA0A1W2PPD8 638 aa13.07□□□□□ -0.32
VAV3-209ENST00000525460 ZCCHC11Q5TAX3 1644 aaKnown RBP13.07□□□□□ -0.32
VAV3-209ENST00000525460 EPRSP07814 1512 aaKnown RBP13.07□□□□□ -0.32
VAV3-209ENST00000525460 KDM5BQ9UGL1 1544 aa13.06□□□□□ -0.32
VAV3-209ENST00000525460 CTTNBP2Q8WZ74 1663 aa13.06□□□□□ -0.32
VAV3-209ENST00000525460 FAM9AQ8IZU1 332 aaPredicted RBP13.05□□□□□ -0.32
VAV3-209ENST00000525460 GOLGA3Q08378 1498 aa13.05□□□□□ -0.32
VAV3-209ENST00000525460 GLI2P10070 1586 aa13.04□□□□□ -0.32
VAV3-209ENST00000525460 PRXQ9BXM0 1461 aa13.02□□□□□ -0.33
VAV3-209ENST00000525460 WDR7Q9Y4E6 1490 aa13.02□□□□□ -0.33
VAV3-209ENST00000525460 PPRC1Q5VV67 1664 aaKnown RBP13.02□□□□□ -0.33
VAV3-209ENST00000525460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
VAV3-209ENST00000525460 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
VAV3-209ENST00000525460 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
VAV3-209ENST00000525460 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
VAV3-209ENST00000525460 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
VAV3-209ENST00000525460 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
VAV3-209ENST00000525460 COL17A1Q9UMD9 1497 aaPredicted RBP12.99□□□□□ -0.33
VAV3-209ENST00000525460 CD109Q6YHK3 1445 aa12.98□□□□□ -0.33
VAV3-209ENST00000525460 ABCA8O94911 1581 aa12.97□□□□□ -0.33
VAV3-209ENST00000525460 ADGRL1O94910 1474 aa12.95□□□□□ -0.34
VAV3-209ENST00000525460 ATP10BO94823 1461 aa12.89□□□□□ -0.35
VAV3-209ENST00000525460 CFAP43Q8NDM7 1665 aa12.89□□□□□ -0.35
VAV3-209ENST00000525460 MAGI3Q5TCQ9 1506 aa12.89□□□□□ -0.35
VAV3-209ENST00000525460 FHOD3Q2V2M9 1422 aa12.88□□□□□ -0.35
VAV3-209ENST00000525460 ATP1B4Q9UN42 357 aaPredicted RBP12.87□□□□□ -0.35
VAV3-209ENST00000525460 EEA1Q15075 1411 aa12.86□□□□□ -0.35
VAV3-209ENST00000525460 RAPGEF6Q8TEU7 1601 aa12.86□□□□□ -0.35
VAV3-209ENST00000525460 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
VAV3-209ENST00000525460 SAMD9Q5K651 1589 aa12.86□□□□□ -0.35
VAV3-209ENST00000525460 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
VAV3-209ENST00000525460 UBTFP17480 764 aaKnown RBP12.84□□□□□ -0.35
VAV3-209ENST00000525460 PLEKHD1A6NEE1 506 aa12.82□□□□□ -0.36
VAV3-209ENST00000525460 ARID4BQ4LE39 1312 aaPredicted RBP12.82□□□□□ -0.36
VAV3-209ENST00000525460 NUP153P49790 1475 aaKnown RBP12.81□□□□□ -0.36
VAV3-209ENST00000525460 KIF21BO75037 1637 aa12.8□□□□□ -0.36
VAV3-209ENST00000525460 ABCA9Q8IUA7 1624 aa12.79□□□□□ -0.36
VAV3-209ENST00000525460 PLPPR3Q6T4P5 718 aa12.79□□□□□ -0.36
VAV3-209ENST00000525460 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
VAV3-209ENST00000525460 HECW2Q9P2P5 1572 aa12.78□□□□□ -0.36
VAV3-209ENST00000525460 PHLDB1Q86UU1 1377 aa12.75□□□□□ -0.37
VAV3-209ENST00000525460 ILDR1Q86SU0 546 aaPredicted RBP12.75□□□□□ -0.37
VAV3-209ENST00000525460 NEO1Q92859 1461 aa12.75□□□□□ -0.37
VAV3-209ENST00000525460 EFCAB5A4FU69 1503 aa12.74□□□□□ -0.37
VAV3-209ENST00000525460 CDK13Q14004 1512 aaKnown RBP12.74□□□□□ -0.37
VAV3-209ENST00000525460 FANCAO15360 1455 aa12.72□□□□□ -0.37
VAV3-209ENST00000525460 AKNAQ7Z591 1439 aa12.71□□□□□ -0.37
VAV3-209ENST00000525460 DENND4BO75064 1496 aaPredicted RBP12.71□□□□□ -0.38
VAV3-209ENST00000525460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.7□□□□□ -0.38
VAV3-209ENST00000525460 MLECQ14165 292 aa12.7□□□□□ -0.38
VAV3-209ENST00000525460 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
VAV3-209ENST00000525460 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
VAV3-209ENST00000525460 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
VAV3-209ENST00000525460 PTPRMP28827 1452 aa12.68□□□□□ -0.38
VAV3-209ENST00000525460 CDK11AQ9UQ88 783 aaPredicted RBP12.67□□□□□ -0.38
VAV3-209ENST00000525460 FMN1Q68DA7 1419 aa12.66□□□□□ -0.38
VAV3-209ENST00000525460 ARHGAP35Q9NRY4 1499 aa12.66□□□□□ -0.38
VAV3-209ENST00000525460 CFAP74Q9C0B2 1584 aa12.65□□□□□ -0.38
VAV3-209ENST00000525460 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
VAV3-209ENST00000525460 SCAPERQ9BY12 1400 aa12.64□□□□□ -0.39
VAV3-209ENST00000525460 MADDQ8WXG6 1647 aa12.64□□□□□ -0.39
VAV3-209ENST00000525460 ARHGEF40Q8TER5 1519 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms