RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
NR1H3-228ENST00000525441 PRG4Q92954 1404 aaPredicted RBP29.71■■■□□ 2.35
NR1H3-228ENST00000525441 KIAA0586Q9BVV6 1533 aa29.71■■■□□ 2.35
NR1H3-228ENST00000525441 RAPGEF2Q9Y4G8 1499 aa29.61■■■□□ 2.33
NR1H3-228ENST00000525441 TRHP20396 242 aaPredicted RBP29.54■■■□□ 2.32
NR1H3-228ENST00000525441 IQGAP2Q13576 1575 aa29.49■■■□□ 2.31
NR1H3-228ENST00000525441 CARMIL2Q6F5E8 1435 aa29.45■■■□□ 2.3
NR1H3-228ENST00000525441 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
NR1H3-228ENST00000525441 EEA1Q15075 1411 aa29.39■■■□□ 2.3
NR1H3-228ENST00000525441 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
NR1H3-228ENST00000525441 PTPRGP23470 1445 aa29.35■■■□□ 2.29
NR1H3-228ENST00000525441 TNIKQ9UKE5 1360 aa29.34■■■□□ 2.29
NR1H3-228ENST00000525441 UGGT2Q9NYU1 1516 aa29.32■■■□□ 2.28
NR1H3-228ENST00000525441 NPM1P06748 294 aaKnown RBP eCLIP29.31■■■□□ 2.28
NR1H3-228ENST00000525441 CHIC1Q5VXU3 224 aa29.3■■■□□ 2.28
NR1H3-228ENST00000525441 CTTNBP2Q8WZ74 1663 aa29.28■■■□□ 2.28
NR1H3-228ENST00000525441 DISP1Q96F81 1524 aa29.28■■■□□ 2.28
NR1H3-228ENST00000525441 TTBK1Q5TCY1 1321 aaPredicted RBP29.26■■■□□ 2.27
NR1H3-228ENST00000525441 ADCY10Q96PN6 1610 aa29.24■■■□□ 2.27
NR1H3-228ENST00000525441 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.26
NR1H3-228ENST00000525441 KIAA0556O60303 1618 aa29.2■■■□□ 2.26
NR1H3-228ENST00000525441 GOLGA3Q08378 1498 aa29.19■■■□□ 2.26
NR1H3-228ENST00000525441 MAPKBP1O60336 1514 aa29.15■■■□□ 2.26
NR1H3-228ENST00000525441 UACAQ9BZF9 1416 aa29.13■■■□□ 2.25
NR1H3-228ENST00000525441 UHRF1BP1LA0JNW5 1464 aa29.11■■■□□ 2.25
NR1H3-228ENST00000525441 ABCC2Q92887 1545 aa29.1■■■□□ 2.25
NR1H3-228ENST00000525441 ABCC10Q5T3U5 1492 aa29.05■■■□□ 2.24
NR1H3-228ENST00000525441 KIF21BO75037 1637 aa29.05■■■□□ 2.24
NR1H3-228ENST00000525441 FAM69CQ0P6D2 419 aa29.02■■■□□ 2.24
NR1H3-228ENST00000525441 KIF13AQ9H1H9 1805 aa29■■■□□ 2.23
NR1H3-228ENST00000525441 KDM5BQ9UGL1 1544 aa28.96■■■□□ 2.23
NR1H3-228ENST00000525441 DIP2BQ9P265 1576 aa28.96■■■□□ 2.23
NR1H3-228ENST00000525441 PLB1Q6P1J6 1458 aa28.95■■■□□ 2.22
NR1H3-228ENST00000525441 P3H3Q8IVL6 736 aa28.93■■■□□ 2.22
NR1H3-228ENST00000525441 ASXL2Q76L83 1435 aa28.93■■■□□ 2.22
NR1H3-228ENST00000525441 SAMD9Q5K651 1589 aa28.91■■■□□ 2.22
NR1H3-228ENST00000525441 ABCA8O94911 1581 aa28.89■■■□□ 2.22
NR1H3-228ENST00000525441 RANGAP1P46060 587 aaPredicted RBP28.87■■■□□ 2.21
NR1H3-228ENST00000525441 ZCCHC11Q5TAX3 1644 aaKnown RBP28.87■■■□□ 2.21
NR1H3-228ENST00000525441 UBTFP17480 764 aaKnown RBP28.86■■■□□ 2.21
NR1H3-228ENST00000525441 EHMT2Q96KQ7 1210 aa28.82■■■□□ 2.2
NR1H3-228ENST00000525441 EFCAB5A4FU69 1503 aa28.79■■■□□ 2.2
NR1H3-228ENST00000525441 GLI2P10070 1586 aa28.79■■■□□ 2.2
NR1H3-228ENST00000525441 FHOD3Q2V2M9 1422 aa28.76■■■□□ 2.19
NR1H3-228ENST00000525441 EPRSP07814 1512 aaKnown RBP28.75■■■□□ 2.19
NR1H3-228ENST00000525441 WDR7Q9Y4E6 1490 aa28.75■■■□□ 2.19
NR1H3-228ENST00000525441 TSPOAP1O95153 1857 aa28.7■■■□□ 2.19
NR1H3-228ENST00000525441 RAPGEF6Q8TEU7 1601 aa28.7■■■□□ 2.19
NR1H3-228ENST00000525441 ARID3CA6NKF2 412 aa28.67■■■□□ 2.18
NR1H3-228ENST00000525441 ATP10BO94823 1461 aa28.66■■■□□ 2.18
NR1H3-228ENST00000525441 KCNH8Q96L42 1107 aa28.62■■■□□ 2.17
NR1H3-228ENST00000525441 MAP3K4Q9Y6R4 1608 aa28.61■■■□□ 2.17
NR1H3-228ENST00000525441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
NR1H3-228ENST00000525441 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
NR1H3-228ENST00000525441 NUP153P49790 1475 aaKnown RBP28.59■■■□□ 2.17
NR1H3-228ENST00000525441 KDM6BO15054 1643 aa28.58■■■□□ 2.17
NR1H3-228ENST00000525441 TEX14Q8IWB6 1497 aa28.58■■■□□ 2.17
NR1H3-228ENST00000525441 ARHGAP35Q9NRY4 1499 aa28.57■■■□□ 2.16
NR1H3-228ENST00000525441 PPRC1Q5VV67 1664 aaKnown RBP28.57■■■□□ 2.16
NR1H3-228ENST00000525441 FMN1Q68DA7 1419 aa28.55■■■□□ 2.16
NR1H3-228ENST00000525441 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
NR1H3-228ENST00000525441 CFAP43Q8NDM7 1665 aa28.51■■■□□ 2.15
NR1H3-228ENST00000525441 MAGI3Q5TCQ9 1506 aa28.47■■■□□ 2.15
NR1H3-228ENST00000525441 PLEKHD1A6NEE1 506 aa28.46■■■□□ 2.15
NR1H3-228ENST00000525441 ATP1B4Q9UN42 357 aaPredicted RBP28.42■■■□□ 2.14
NR1H3-228ENST00000525441 HECW1Q76N89 1606 aa28.4■■■□□ 2.14
NR1H3-228ENST00000525441 ABCA9Q8IUA7 1624 aa28.4■■■□□ 2.14
NR1H3-228ENST00000525441 CLIP1P30622 1438 aa28.36■■■□□ 2.13
NR1H3-228ENST00000525441 CDK13Q14004 1512 aaKnown RBP28.36■■■□□ 2.13
NR1H3-228ENST00000525441 COL17A1Q9UMD9 1497 aaPredicted RBP28.35■■■□□ 2.13
NR1H3-228ENST00000525441 CDK11AQ9UQ88 783 aaPredicted RBP28.32■■■□□ 2.12
NR1H3-228ENST00000525441 PHLDB1Q86UU1 1377 aa28.3■■■□□ 2.12
NR1H3-228ENST00000525441 CASKIN1Q8WXD9 1431 aa28.27■■■□□ 2.12
NR1H3-228ENST00000525441 AEBP2Q6ZN18 517 aaPredicted RBP28.26■■■□□ 2.11
NR1H3-228ENST00000525441 NEO1Q92859 1461 aa28.24■■■□□ 2.11
NR1H3-228ENST00000525441 ARAP3Q8WWN8 1544 aa28.23■■■□□ 2.11
NR1H3-228ENST00000525441 PCF11O94913 1555 aaKnown RBP28.22■■■□□ 2.11
NR1H3-228ENST00000525441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.22■■■□□ 2.11
NR1H3-228ENST00000525441 CCDC18Q5T9S5 1454 aa28.21■■■□□ 2.11
NR1H3-228ENST00000525441 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
NR1H3-228ENST00000525441 TROQ12816 1431 aaPredicted RBP28.18■■■□□ 2.1
NR1H3-228ENST00000525441 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
NR1H3-228ENST00000525441 CEP162Q5TB80 1403 aa28.16■■■□□ 2.1
NR1H3-228ENST00000525441 LRRIQ1Q96JM4 1722 aa28.13■■■□□ 2.09
NR1H3-228ENST00000525441 FANCAO15360 1455 aa28.13■■■□□ 2.09
NR1H3-228ENST00000525441 CFAP74Q9C0B2 1584 aa28.12■■■□□ 2.09
NR1H3-228ENST00000525441 KIF14Q15058 1648 aa28.11■■■□□ 2.09
NR1H3-228ENST00000525441 PLCH2O75038 1416 aa28.09■■■□□ 2.09
NR1H3-228ENST00000525441 AKNAQ7Z591 1439 aa28.09■■■□□ 2.09
NR1H3-228ENST00000525441 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
NR1H3-228ENST00000525441 RAPGEF3O95398 923 aa28.07■■■□□ 2.08
NR1H3-228ENST00000525441 DENND4BO75064 1496 aaPredicted RBP28.04■■■□□ 2.08
NR1H3-228ENST00000525441 KDM4FA0A1W2PPD8 638 aa28.03■■■□□ 2.08
NR1H3-228ENST00000525441 MYO5CQ9NQX4 1742 aa28.02■■■□□ 2.08
NR1H3-228ENST00000525441 EFCAB2Q5VUJ9 269 aa28.02■■■□□ 2.08
NR1H3-228ENST00000525441 ADGRL1O94910 1474 aa27.97■■■□□ 2.07
NR1H3-228ENST00000525441 FRMPD1Q5SYB0 1578 aa27.97■■■□□ 2.07
NR1H3-228ENST00000525441 ARHGAP5Q13017 1502 aa27.95■■■□□ 2.06
NR1H3-228ENST00000525441 SCAPERQ9BY12 1400 aa27.93■■■□□ 2.06
NR1H3-228ENST00000525441 RICTORQ6R327 1708 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms