RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 RAPGEF2Q9Y4G8 1499 aa20.09■□□□□ 0.81
GPATCH4-212ENST00000525375 PRXQ9BXM0 1461 aa20.08■□□□□ 0.81
GPATCH4-212ENST00000525375 FAM9AQ8IZU1 332 aaPredicted RBP20.04■□□□□ 0.8
GPATCH4-212ENST00000525375 KIAA0586Q9BVV6 1533 aa20.03■□□□□ 0.8
GPATCH4-212ENST00000525375 EEA1Q15075 1411 aa20■□□□□ 0.79
GPATCH4-212ENST00000525375 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
GPATCH4-212ENST00000525375 PRG4Q92954 1404 aaPredicted RBP19.98■□□□□ 0.79
GPATCH4-212ENST00000525375 IQGAP2Q13576 1575 aa19.97■□□□□ 0.79
GPATCH4-212ENST00000525375 JPH4Q96JJ6 628 aa19.96■□□□□ 0.79
GPATCH4-212ENST00000525375 CTTNBP2Q8WZ74 1663 aa19.96■□□□□ 0.79
GPATCH4-212ENST00000525375 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
GPATCH4-212ENST00000525375 KIF21BO75037 1637 aa19.91■□□□□ 0.78
GPATCH4-212ENST00000525375 DISP1Q96F81 1524 aa19.87■□□□□ 0.77
GPATCH4-212ENST00000525375 UGGT2Q9NYU1 1516 aa19.86■□□□□ 0.77
GPATCH4-212ENST00000525375 EHMT2Q96KQ7 1210 aa19.83■□□□□ 0.77
GPATCH4-212ENST00000525375 KIAA0556O60303 1618 aa19.83■□□□□ 0.76
GPATCH4-212ENST00000525375 GOLGA3Q08378 1498 aa19.76■□□□□ 0.75
GPATCH4-212ENST00000525375 CARMIL2Q6F5E8 1435 aa19.75■□□□□ 0.75
GPATCH4-212ENST00000525375 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
GPATCH4-212ENST00000525375 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
GPATCH4-212ENST00000525375 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
GPATCH4-212ENST00000525375 SAMD9Q5K651 1589 aa19.73■□□□□ 0.75
GPATCH4-212ENST00000525375 PTPRGP23470 1445 aa19.7■□□□□ 0.74
GPATCH4-212ENST00000525375 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
GPATCH4-212ENST00000525375 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
GPATCH4-212ENST00000525375 UBTFP17480 764 aaKnown RBP19.63■□□□□ 0.73
GPATCH4-212ENST00000525375 PLB1Q6P1J6 1458 aa19.62■□□□□ 0.73
GPATCH4-212ENST00000525375 FHOD3Q2V2M9 1422 aa19.61■□□□□ 0.73
GPATCH4-212ENST00000525375 ABCC2Q92887 1545 aa19.61■□□□□ 0.73
GPATCH4-212ENST00000525375 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
GPATCH4-212ENST00000525375 ABCA8O94911 1581 aa19.59■□□□□ 0.73
GPATCH4-212ENST00000525375 UHRF1BP1LA0JNW5 1464 aa19.58■□□□□ 0.72
GPATCH4-212ENST00000525375 EFCAB5A4FU69 1503 aa19.57■□□□□ 0.72
GPATCH4-212ENST00000525375 ARHGAP35Q9NRY4 1499 aa19.56■□□□□ 0.72
GPATCH4-212ENST00000525375 MAPKBP1O60336 1514 aa19.53■□□□□ 0.72
GPATCH4-212ENST00000525375 ZCCHC11Q5TAX3 1644 aaKnown RBP19.53■□□□□ 0.72
GPATCH4-212ENST00000525375 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
GPATCH4-212ENST00000525375 KDM5BQ9UGL1 1544 aa19.51■□□□□ 0.71
GPATCH4-212ENST00000525375 KIF13AQ9H1H9 1805 aa19.49■□□□□ 0.71
GPATCH4-212ENST00000525375 RAPGEF6Q8TEU7 1601 aa19.49■□□□□ 0.71
GPATCH4-212ENST00000525375 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
GPATCH4-212ENST00000525375 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
GPATCH4-212ENST00000525375 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
GPATCH4-212ENST00000525375 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
GPATCH4-212ENST00000525375 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
GPATCH4-212ENST00000525375 ASXL2Q76L83 1435 aa19.43■□□□□ 0.7
GPATCH4-212ENST00000525375 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
GPATCH4-212ENST00000525375 ABCC10Q5T3U5 1492 aa19.42■□□□□ 0.7
GPATCH4-212ENST00000525375 CLIP1P30622 1438 aa19.41■□□□□ 0.7
GPATCH4-212ENST00000525375 ATP10BO94823 1461 aa19.4■□□□□ 0.7
GPATCH4-212ENST00000525375 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
GPATCH4-212ENST00000525375 PCF11O94913 1555 aaKnown RBP19.36■□□□□ 0.69
GPATCH4-212ENST00000525375 LRRIQ1Q96JM4 1722 aa19.36■□□□□ 0.69
GPATCH4-212ENST00000525375 EPRSP07814 1512 aaKnown RBP19.35■□□□□ 0.69
GPATCH4-212ENST00000525375 CDK13Q14004 1512 aaKnown RBP19.35■□□□□ 0.69
GPATCH4-212ENST00000525375 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
GPATCH4-212ENST00000525375 FMN1Q68DA7 1419 aa19.34■□□□□ 0.69
GPATCH4-212ENST00000525375 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
GPATCH4-212ENST00000525375 HECW1Q76N89 1606 aa19.32■□□□□ 0.68
GPATCH4-212ENST00000525375 GLI2P10070 1586 aa19.31■□□□□ 0.68
GPATCH4-212ENST00000525375 PPRC1Q5VV67 1664 aaKnown RBP19.3■□□□□ 0.68
GPATCH4-212ENST00000525375 TSPOAP1O95153 1857 aa19.28■□□□□ 0.68
GPATCH4-212ENST00000525375 MAP3K4Q9Y6R4 1608 aa19.27■□□□□ 0.68
GPATCH4-212ENST00000525375 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
GPATCH4-212ENST00000525375 ATP1B4Q9UN42 357 aaPredicted RBP19.23■□□□□ 0.67
GPATCH4-212ENST00000525375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.22■□□□□ 0.67
GPATCH4-212ENST00000525375 HNRNPUL2Q1KMD3 747 aaKnown RBP19.22■□□□□ 0.67
GPATCH4-212ENST00000525375 FYCO1Q9BQS8 1478 aa19.22■□□□□ 0.67
GPATCH4-212ENST00000525375 KCNH8Q96L42 1107 aa19.21■□□□□ 0.67
GPATCH4-212ENST00000525375 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
GPATCH4-212ENST00000525375 ABCA9Q8IUA7 1624 aa19.18■□□□□ 0.66
GPATCH4-212ENST00000525375 CFAP43Q8NDM7 1665 aa19.18■□□□□ 0.66
GPATCH4-212ENST00000525375 TTC37Q6PGP7 1564 aa19.16■□□□□ 0.66
GPATCH4-212ENST00000525375 KIF14Q15058 1648 aa19.16■□□□□ 0.66
GPATCH4-212ENST00000525375 CCDC18Q5T9S5 1454 aa19.14■□□□□ 0.65
GPATCH4-212ENST00000525375 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.14■□□□□ 0.65
GPATCH4-212ENST00000525375 CD109Q6YHK3 1445 aa19.12■□□□□ 0.65
GPATCH4-212ENST00000525375 VPS8Q8N3P4 1428 aa19.11■□□□□ 0.65
GPATCH4-212ENST00000525375 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
GPATCH4-212ENST00000525375 TROQ12816 1431 aaPredicted RBP19.09■□□□□ 0.65
GPATCH4-212ENST00000525375 COL17A1Q9UMD9 1497 aaPredicted RBP19.09■□□□□ 0.65
GPATCH4-212ENST00000525375 KDM6BO15054 1643 aa19.08■□□□□ 0.65
GPATCH4-212ENST00000525375 TEX14Q8IWB6 1497 aa19.05■□□□□ 0.64
GPATCH4-212ENST00000525375 TIAM1Q13009 1591 aa19.02■□□□□ 0.63
GPATCH4-212ENST00000525375 MYO5CQ9NQX4 1742 aa19■□□□□ 0.63
GPATCH4-212ENST00000525375 CDK11AQ9UQ88 783 aaPredicted RBP18.99■□□□□ 0.63
GPATCH4-212ENST00000525375 EHBP1L1Q8N3D4 1523 aa18.98■□□□□ 0.63
GPATCH4-212ENST00000525375 CDC42BPBQ9Y5S2 1711 aa18.96■□□□□ 0.63
GPATCH4-212ENST00000525375 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
GPATCH4-212ENST00000525375 CDC42BPAQ5VT25 1732 aa18.95■□□□□ 0.62
GPATCH4-212ENST00000525375 FRMPD1Q5SYB0 1578 aa18.95■□□□□ 0.62
GPATCH4-212ENST00000525375 PLCH2O75038 1416 aa18.95■□□□□ 0.62
GPATCH4-212ENST00000525375 FANCAO15360 1455 aa18.95■□□□□ 0.62
GPATCH4-212ENST00000525375 NEO1Q92859 1461 aa18.95■□□□□ 0.62
GPATCH4-212ENST00000525375 ARAP3Q8WWN8 1544 aa18.93■□□□□ 0.62
GPATCH4-212ENST00000525375 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
GPATCH4-212ENST00000525375 CFAP74Q9C0B2 1584 aa18.92■□□□□ 0.62
GPATCH4-212ENST00000525375 AKNAQ7Z591 1439 aa18.91■□□□□ 0.62
GPATCH4-212ENST00000525375 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
GPATCH4-212ENST00000525375 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms