RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-206ENST00000525303 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
TRAPPC4-206ENST00000525303 CUL7Q14999 1698 aa16.94■□□□□ 0.3
TRAPPC4-206ENST00000525303 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
TRAPPC4-206ENST00000525303 MAPKBP1O60336 1514 aa16.89■□□□□ 0.29
TRAPPC4-206ENST00000525303 DIP2BQ9P265 1576 aa16.89■□□□□ 0.29
TRAPPC4-206ENST00000525303 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
TRAPPC4-206ENST00000525303 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
TRAPPC4-206ENST00000525303 ABCC10Q5T3U5 1492 aa16.87■□□□□ 0.29
TRAPPC4-206ENST00000525303 KIAA0586Q9BVV6 1533 aa16.87■□□□□ 0.29
TRAPPC4-206ENST00000525303 IGF1RP08069 1367 aa16.86■□□□□ 0.29
TRAPPC4-206ENST00000525303 NPM1P06748 294 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAPPC4-206ENST00000525303 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
TRAPPC4-206ENST00000525303 KDM6BO15054 1643 aa16.78■□□□□ 0.28
TRAPPC4-206ENST00000525303 CARMIL1Q5VZK9 1371 aa16.76■□□□□ 0.27
TRAPPC4-206ENST00000525303 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
TRAPPC4-206ENST00000525303 PTPRGP23470 1445 aa16.73■□□□□ 0.27
TRAPPC4-206ENST00000525303 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC4-206ENST00000525303 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
TRAPPC4-206ENST00000525303 TNIKQ9UKE5 1360 aa16.69■□□□□ 0.26
TRAPPC4-206ENST00000525303 ABCC2Q92887 1545 aa16.69■□□□□ 0.26
TRAPPC4-206ENST00000525303 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
TRAPPC4-206ENST00000525303 DISP1Q96F81 1524 aa16.65■□□□□ 0.26
TRAPPC4-206ENST00000525303 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
TRAPPC4-206ENST00000525303 GLI2P10070 1586 aa16.64■□□□□ 0.25
TRAPPC4-206ENST00000525303 UHRF1BP1LA0JNW5 1464 aa16.63■□□□□ 0.25
TRAPPC4-206ENST00000525303 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
TRAPPC4-206ENST00000525303 PLB1Q6P1J6 1458 aa16.62■□□□□ 0.25
TRAPPC4-206ENST00000525303 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
TRAPPC4-206ENST00000525303 ZCCHC11Q5TAX3 1644 aaKnown RBP16.61■□□□□ 0.25
TRAPPC4-206ENST00000525303 RAPGEF2Q9Y4G8 1499 aa16.61■□□□□ 0.25
TRAPPC4-206ENST00000525303 UGGT2Q9NYU1 1516 aa16.6■□□□□ 0.25
TRAPPC4-206ENST00000525303 KIAA0556O60303 1618 aa16.6■□□□□ 0.25
TRAPPC4-206ENST00000525303 KDM4FA0A1W2PPD8 638 aa16.6■□□□□ 0.25
TRAPPC4-206ENST00000525303 MAP3K4Q9Y6R4 1608 aa16.59■□□□□ 0.25
TRAPPC4-206ENST00000525303 KDM5BQ9UGL1 1544 aa16.57■□□□□ 0.24
TRAPPC4-206ENST00000525303 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
TRAPPC4-206ENST00000525303 COL17A1Q9UMD9 1497 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC4-206ENST00000525303 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
TRAPPC4-206ENST00000525303 ADGRL1O94910 1474 aa16.48■□□□□ 0.23
TRAPPC4-206ENST00000525303 WDR7Q9Y4E6 1490 aa16.47■□□□□ 0.23
TRAPPC4-206ENST00000525303 CFAP43Q8NDM7 1665 aa16.46■□□□□ 0.23
TRAPPC4-206ENST00000525303 ABCA8O94911 1581 aa16.44■□□□□ 0.22
TRAPPC4-206ENST00000525303 GOLGA3Q08378 1498 aa16.44■□□□□ 0.22
TRAPPC4-206ENST00000525303 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
TRAPPC4-206ENST00000525303 CD109Q6YHK3 1445 aa16.36■□□□□ 0.21
TRAPPC4-206ENST00000525303 MAGI3Q5TCQ9 1506 aa16.36■□□□□ 0.21
TRAPPC4-206ENST00000525303 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
TRAPPC4-206ENST00000525303 KIF21BO75037 1637 aa16.32■□□□□ 0.2
TRAPPC4-206ENST00000525303 HECW2Q9P2P5 1572 aa16.32■□□□□ 0.2
TRAPPC4-206ENST00000525303 SAMD9Q5K651 1589 aa16.3■□□□□ 0.2
TRAPPC4-206ENST00000525303 ARID3CA6NKF2 412 aa16.28■□□□□ 0.2
TRAPPC4-206ENST00000525303 P3H3Q8IVL6 736 aa16.28■□□□□ 0.2
TRAPPC4-206ENST00000525303 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.2
TRAPPC4-206ENST00000525303 ATP10BO94823 1461 aa16.27■□□□□ 0.19
TRAPPC4-206ENST00000525303 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.19
TRAPPC4-206ENST00000525303 FAM9AQ8IZU1 332 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-206ENST00000525303 ARAP3Q8WWN8 1544 aa16.24■□□□□ 0.19
TRAPPC4-206ENST00000525303 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC4-206ENST00000525303 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
TRAPPC4-206ENST00000525303 ADAMTSL3P82987 1691 aa16.17■□□□□ 0.18
TRAPPC4-206ENST00000525303 PHLDB1Q86UU1 1377 aa16.16■□□□□ 0.18
TRAPPC4-206ENST00000525303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-206ENST00000525303 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-206ENST00000525303 FRMPD1Q5SYB0 1578 aa16.16■□□□□ 0.18
TRAPPC4-206ENST00000525303 NUP153P49790 1475 aaKnown RBP16.16■□□□□ 0.18
TRAPPC4-206ENST00000525303 NEO1Q92859 1461 aa16.16■□□□□ 0.18
TRAPPC4-206ENST00000525303 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC4-206ENST00000525303 BCORL1Q5H9F3 1711 aa16.14■□□□□ 0.17
TRAPPC4-206ENST00000525303 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
TRAPPC4-206ENST00000525303 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
TRAPPC4-206ENST00000525303 RICTORQ6R327 1708 aa16.13■□□□□ 0.17
TRAPPC4-206ENST00000525303 EEA1Q15075 1411 aa16.12■□□□□ 0.17
TRAPPC4-206ENST00000525303 MADDQ8WXG6 1647 aa16.1■□□□□ 0.17
TRAPPC4-206ENST00000525303 PTPRMP28827 1452 aa16.1■□□□□ 0.17
TRAPPC4-206ENST00000525303 CFAP74Q9C0B2 1584 aa16.09■□□□□ 0.17
TRAPPC4-206ENST00000525303 EFCAB5A4FU69 1503 aa16.07■□□□□ 0.16
TRAPPC4-206ENST00000525303 ARHGEF40Q8TER5 1519 aa16.07■□□□□ 0.16
TRAPPC4-206ENST00000525303 TTC37Q6PGP7 1564 aa16.07■□□□□ 0.16
TRAPPC4-206ENST00000525303 RIMS1Q86UR5 1692 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-206ENST00000525303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.06■□□□□ 0.16
TRAPPC4-206ENST00000525303 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
TRAPPC4-206ENST00000525303 ARID4BQ4LE39 1312 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC4-206ENST00000525303 FANCAO15360 1455 aa16.03■□□□□ 0.16
TRAPPC4-206ENST00000525303 DENND4BO75064 1496 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-206ENST00000525303 AKNAQ7Z591 1439 aa16.02■□□□□ 0.16
TRAPPC4-206ENST00000525303 SIGLEC1Q9BZZ2 1709 aa16.02■□□□□ 0.16
TRAPPC4-206ENST00000525303 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
TRAPPC4-206ENST00000525303 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
TRAPPC4-206ENST00000525303 MYO5CQ9NQX4 1742 aa15.99■□□□□ 0.15
TRAPPC4-206ENST00000525303 ZMYM4Q5VZL5 1548 aa15.99■□□□□ 0.15
TRAPPC4-206ENST00000525303 FER1L4A9Z1Z3 1794 aa15.98■□□□□ 0.15
TRAPPC4-206ENST00000525303 ZFYVE16Q7Z3T8 1539 aa15.97■□□□□ 0.15
TRAPPC4-206ENST00000525303 LMTK3Q96Q04 1460 aa15.97■□□□□ 0.15
TRAPPC4-206ENST00000525303 HECW1Q76N89 1606 aa15.96■□□□□ 0.15
TRAPPC4-206ENST00000525303 LRRIQ1Q96JM4 1722 aa15.94■□□□□ 0.14
TRAPPC4-206ENST00000525303 YEATS2Q9ULM3 1422 aa15.94■□□□□ 0.14
TRAPPC4-206ENST00000525303 POGZQ7Z3K3 1410 aa15.93■□□□□ 0.14
TRAPPC4-206ENST00000525303 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
TRAPPC4-206ENST00000525303 EHMT2Q96KQ7 1210 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms