RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
SMCO4-202ENST00000525141 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
SMCO4-202ENST00000525141 SHROOM2Q13796 1616 aa21.72■■□□□ 1.07
SMCO4-202ENST00000525141 PRG4Q92954 1404 aaPredicted RBP21.67■■□□□ 1.06
SMCO4-202ENST00000525141 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
SMCO4-202ENST00000525141 RUSC2Q8N2Y8 1516 aa21.59■■□□□ 1.05
SMCO4-202ENST00000525141 KIAA0586Q9BVV6 1533 aa21.58■■□□□ 1.04
SMCO4-202ENST00000525141 CUL7Q14999 1698 aa21.56■■□□□ 1.04
SMCO4-202ENST00000525141 RAPGEF2Q9Y4G8 1499 aa21.4■■□□□ 1.02
SMCO4-202ENST00000525141 PTPRGP23470 1445 aa21.37■■□□□ 1.01
SMCO4-202ENST00000525141 TTBK1Q5TCY1 1321 aaPredicted RBP21.35■■□□□ 1.01
SMCO4-202ENST00000525141 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
SMCO4-202ENST00000525141 ADCY10Q96PN6 1610 aa21.35■■□□□ 1.01
SMCO4-202ENST00000525141 TNIKQ9UKE5 1360 aa21.33■■□□□ 1
SMCO4-202ENST00000525141 IQGAP2Q13576 1575 aa21.32■■□□□ 1
SMCO4-202ENST00000525141 DISP1Q96F81 1524 aa21.31■■□□□ 1
SMCO4-202ENST00000525141 CARMIL2Q6F5E8 1435 aa21.3■■□□□ 1
SMCO4-202ENST00000525141 KIF13AQ9H1H9 1805 aa21.29■■□□□ 1
SMCO4-202ENST00000525141 FAM69CQ0P6D2 419 aa21.29■■□□□ 1
SMCO4-202ENST00000525141 PRXQ9BXM0 1461 aa21.27■■□□□ 1
SMCO4-202ENST00000525141 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
SMCO4-202ENST00000525141 UGGT2Q9NYU1 1516 aa21.25■□□□□ 0.99
SMCO4-202ENST00000525141 MAPKBP1O60336 1514 aa21.24■□□□□ 0.99
SMCO4-202ENST00000525141 CSRNP3Q8WYN3 585 aa21.23■□□□□ 0.99
SMCO4-202ENST00000525141 FOXD1Q16676 465 aa21.22■□□□□ 0.99
SMCO4-202ENST00000525141 UACAQ9BZF9 1416 aa21.19■□□□□ 0.98
SMCO4-202ENST00000525141 UHRF1BP1LA0JNW5 1464 aa21.18■□□□□ 0.98
SMCO4-202ENST00000525141 ABCC2Q92887 1545 aa21.17■□□□□ 0.98
SMCO4-202ENST00000525141 DIP2BQ9P265 1576 aa21.15■□□□□ 0.98
SMCO4-202ENST00000525141 KIAA0556O60303 1618 aa21.14■□□□□ 0.97
SMCO4-202ENST00000525141 CTTNBP2Q8WZ74 1663 aa21.11■□□□□ 0.97
SMCO4-202ENST00000525141 ASXL2Q76L83 1435 aa21.11■□□□□ 0.97
SMCO4-202ENST00000525141 FAM9AQ8IZU1 332 aaPredicted RBP21.09■□□□□ 0.97
SMCO4-202ENST00000525141 KDM5BQ9UGL1 1544 aa21.09■□□□□ 0.97
SMCO4-202ENST00000525141 P3H3Q8IVL6 736 aa21.07■□□□□ 0.96
SMCO4-202ENST00000525141 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
SMCO4-202ENST00000525141 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
SMCO4-202ENST00000525141 TSPOAP1O95153 1857 aa21.03■□□□□ 0.96
SMCO4-202ENST00000525141 EEA1Q15075 1411 aa21.02■□□□□ 0.96
SMCO4-202ENST00000525141 GLI2P10070 1586 aa21■□□□□ 0.95
SMCO4-202ENST00000525141 ABCA8O94911 1581 aa20.99■□□□□ 0.95
SMCO4-202ENST00000525141 ZCCHC11Q5TAX3 1644 aaKnown RBP20.99■□□□□ 0.95
SMCO4-202ENST00000525141 EPRSP07814 1512 aaKnown RBP20.98■□□□□ 0.95
SMCO4-202ENST00000525141 PPRC1Q5VV67 1664 aaKnown RBP20.94■□□□□ 0.94
SMCO4-202ENST00000525141 RANGAP1P46060 587 aaPredicted RBP20.93■□□□□ 0.94
SMCO4-202ENST00000525141 KCNH8Q96L42 1107 aa20.92■□□□□ 0.94
SMCO4-202ENST00000525141 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
SMCO4-202ENST00000525141 SAMD9Q5K651 1589 aa20.89■□□□□ 0.94
SMCO4-202ENST00000525141 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.94
SMCO4-202ENST00000525141 ATP10BO94823 1461 aa20.88■□□□□ 0.93
SMCO4-202ENST00000525141 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
SMCO4-202ENST00000525141 KDM6BO15054 1643 aa20.88■□□□□ 0.93
SMCO4-202ENST00000525141 MAP3K4Q9Y6R4 1608 aa20.87■□□□□ 0.93
SMCO4-202ENST00000525141 EHMT2Q96KQ7 1210 aa20.85■□□□□ 0.93
SMCO4-202ENST00000525141 KIF21BO75037 1637 aa20.83■□□□□ 0.93
SMCO4-202ENST00000525141 KDM4FA0A1W2PPD8 638 aa20.81■□□□□ 0.92
SMCO4-202ENST00000525141 FHOD3Q2V2M9 1422 aa20.8■□□□□ 0.92
SMCO4-202ENST00000525141 CD109Q6YHK3 1445 aa20.79■□□□□ 0.92
SMCO4-202ENST00000525141 UBTFP17480 764 aaKnown RBP20.78■□□□□ 0.92
SMCO4-202ENST00000525141 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
SMCO4-202ENST00000525141 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
SMCO4-202ENST00000525141 RAPGEF6Q8TEU7 1601 aa20.75■□□□□ 0.91
SMCO4-202ENST00000525141 MAGI3Q5TCQ9 1506 aa20.74■□□□□ 0.91
SMCO4-202ENST00000525141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
SMCO4-202ENST00000525141 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
SMCO4-202ENST00000525141 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.91
SMCO4-202ENST00000525141 PLEKHD1A6NEE1 506 aa20.66■□□□□ 0.9
SMCO4-202ENST00000525141 EFCAB5A4FU69 1503 aa20.66■□□□□ 0.9
SMCO4-202ENST00000525141 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
SMCO4-202ENST00000525141 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
SMCO4-202ENST00000525141 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
SMCO4-202ENST00000525141 RAPGEF3O95398 923 aa20.57■□□□□ 0.88
SMCO4-202ENST00000525141 ATP1B4Q9UN42 357 aaPredicted RBP20.56■□□□□ 0.88
SMCO4-202ENST00000525141 PHLDB1Q86UU1 1377 aa20.55■□□□□ 0.88
SMCO4-202ENST00000525141 CDK13Q14004 1512 aaKnown RBP20.54■□□□□ 0.88
SMCO4-202ENST00000525141 FMN1Q68DA7 1419 aa20.53■□□□□ 0.88
SMCO4-202ENST00000525141 ADGRL1O94910 1474 aa20.52■□□□□ 0.88
SMCO4-202ENST00000525141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.51■□□□□ 0.87
SMCO4-202ENST00000525141 NEO1Q92859 1461 aa20.5■□□□□ 0.87
SMCO4-202ENST00000525141 AKNAQ7Z591 1439 aa20.45■□□□□ 0.86
SMCO4-202ENST00000525141 TTC37Q6PGP7 1564 aa20.43■□□□□ 0.86
SMCO4-202ENST00000525141 PLCH2O75038 1416 aa20.42■□□□□ 0.86
SMCO4-202ENST00000525141 LRRIQ1Q96JM4 1722 aa20.41■□□□□ 0.86
SMCO4-202ENST00000525141 CDK11AQ9UQ88 783 aaPredicted RBP20.41■□□□□ 0.86
SMCO4-202ENST00000525141 FANCAO15360 1455 aa20.41■□□□□ 0.86
SMCO4-202ENST00000525141 FRMPD1Q5SYB0 1578 aa20.41■□□□□ 0.86
SMCO4-202ENST00000525141 HECW1Q76N89 1606 aa20.41■□□□□ 0.86
SMCO4-202ENST00000525141 CASKIN1Q8WXD9 1431 aa20.38■□□□□ 0.85
SMCO4-202ENST00000525141 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
SMCO4-202ENST00000525141 TROQ12816 1431 aaPredicted RBP20.36■□□□□ 0.85
SMCO4-202ENST00000525141 CLIP1P30622 1438 aa20.35■□□□□ 0.85
SMCO4-202ENST00000525141 EFCAB2Q5VUJ9 269 aa20.34■□□□□ 0.85
SMCO4-202ENST00000525141 KIF14Q15058 1648 aa20.34■□□□□ 0.85
SMCO4-202ENST00000525141 RICTORQ6R327 1708 aa20.33■□□□□ 0.85
SMCO4-202ENST00000525141 SCAPERQ9BY12 1400 aa20.33■□□□□ 0.84
SMCO4-202ENST00000525141 PCF11O94913 1555 aaKnown RBP20.3■□□□□ 0.84
SMCO4-202ENST00000525141 LOC105371045A0A1W2PR82 267 aa20.28■□□□□ 0.84
SMCO4-202ENST00000525141 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.84
SMCO4-202ENST00000525141 CFAP74Q9C0B2 1584 aa20.27■□□□□ 0.84
SMCO4-202ENST00000525141 AFAP1Q8N556 730 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms