RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RUSC2Q8N2Y8 1516 aa31.81■■■□□ 2.68
CAPN1-203ENST00000525013 PRG4Q92954 1404 aaPredicted RBP31.81■■■□□ 2.68
CAPN1-203ENST00000525013 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
CAPN1-203ENST00000525013 KIAA0586Q9BVV6 1533 aa31.7■■■□□ 2.67
CAPN1-203ENST00000525013 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
CAPN1-203ENST00000525013 IQGAP2Q13576 1575 aa31.48■■■□□ 2.63
CAPN1-203ENST00000525013 TTBK1Q5TCY1 1321 aaPredicted RBP31.42■■■□□ 2.62
CAPN1-203ENST00000525013 CARMIL2Q6F5E8 1435 aa31.41■■■□□ 2.62
CAPN1-203ENST00000525013 NPM1P06748 294 aaKnown RBP eCLIP31.41■■■□□ 2.62
CAPN1-203ENST00000525013 PTPRGP23470 1445 aa31.38■■■□□ 2.61
CAPN1-203ENST00000525013 ADCY10Q96PN6 1610 aa31.37■■■□□ 2.61
CAPN1-203ENST00000525013 TNIKQ9UKE5 1360 aa31.32■■■□□ 2.6
CAPN1-203ENST00000525013 CTTNBP2Q8WZ74 1663 aa31.27■■■□□ 2.6
CAPN1-203ENST00000525013 DISP1Q96F81 1524 aa31.27■■■□□ 2.6
CAPN1-203ENST00000525013 UGGT2Q9NYU1 1516 aa31.27■■■□□ 2.6
CAPN1-203ENST00000525013 PRXQ9BXM0 1461 aa31.27■■■□□ 2.6
CAPN1-203ENST00000525013 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.6
CAPN1-203ENST00000525013 MAPKBP1O60336 1514 aa31.23■■■□□ 2.59
CAPN1-203ENST00000525013 CSRNP3Q8WYN3 585 aa31.19■■■□□ 2.58
CAPN1-203ENST00000525013 FAM69CQ0P6D2 419 aa31.18■■■□□ 2.58
CAPN1-203ENST00000525013 KIAA0556O60303 1618 aa31.17■■■□□ 2.58
CAPN1-203ENST00000525013 ABCC10Q5T3U5 1492 aa31.15■■■□□ 2.58
CAPN1-203ENST00000525013 UACAQ9BZF9 1416 aa31.12■■■□□ 2.57
CAPN1-203ENST00000525013 ABCC2Q92887 1545 aa31.12■■■□□ 2.57
CAPN1-203ENST00000525013 DIP2BQ9P265 1576 aa31.09■■■□□ 2.57
CAPN1-203ENST00000525013 UHRF1BP1LA0JNW5 1464 aa31.09■■■□□ 2.57
CAPN1-203ENST00000525013 EEA1Q15075 1411 aa31.09■■■□□ 2.57
CAPN1-203ENST00000525013 GOLGA3Q08378 1498 aa31.08■■■□□ 2.57
CAPN1-203ENST00000525013 FAM9AQ8IZU1 332 aaPredicted RBP31.08■■■□□ 2.57
CAPN1-203ENST00000525013 ASXL2Q76L83 1435 aa30.99■■■□□ 2.55
CAPN1-203ENST00000525013 TSPOAP1O95153 1857 aa30.98■■■□□ 2.55
CAPN1-203ENST00000525013 CHIC1Q5VXU3 224 aa30.98■■■□□ 2.55
CAPN1-203ENST00000525013 PLB1Q6P1J6 1458 aa30.96■■■□□ 2.55
CAPN1-203ENST00000525013 KDM5BQ9UGL1 1544 aa30.95■■■□□ 2.55
CAPN1-203ENST00000525013 P3H3Q8IVL6 736 aa30.93■■■□□ 2.54
CAPN1-203ENST00000525013 ZCCHC11Q5TAX3 1644 aaKnown RBP30.92■■■□□ 2.54
CAPN1-203ENST00000525013 ABCA8O94911 1581 aa30.85■■■□□ 2.53
CAPN1-203ENST00000525013 RANGAP1P46060 587 aaPredicted RBP30.85■■■□□ 2.53
CAPN1-203ENST00000525013 KIF21BO75037 1637 aa30.82■■■□□ 2.52
CAPN1-203ENST00000525013 GLI2P10070 1586 aa30.82■■■□□ 2.52
CAPN1-203ENST00000525013 SAMD9Q5K651 1589 aa30.79■■■□□ 2.52
CAPN1-203ENST00000525013 EPRSP07814 1512 aaKnown RBP30.78■■■□□ 2.52
CAPN1-203ENST00000525013 EHMT2Q96KQ7 1210 aa30.76■■■□□ 2.51
CAPN1-203ENST00000525013 KDM6BO15054 1643 aa30.76■■■□□ 2.51
CAPN1-203ENST00000525013 WDR7Q9Y4E6 1490 aa30.75■■■□□ 2.51
CAPN1-203ENST00000525013 ARID3CA6NKF2 412 aa30.73■■■□□ 2.51
CAPN1-203ENST00000525013 PPRC1Q5VV67 1664 aaKnown RBP30.71■■■□□ 2.51
CAPN1-203ENST00000525013 KCNH8Q96L42 1107 aa30.69■■■□□ 2.5
CAPN1-203ENST00000525013 MAP3K4Q9Y6R4 1608 aa30.69■■■□□ 2.5
CAPN1-203ENST00000525013 UBTFP17480 764 aaKnown RBP30.68■■■□□ 2.5
CAPN1-203ENST00000525013 AEBP2Q6ZN18 517 aaPredicted RBP30.65■■■□□ 2.5
CAPN1-203ENST00000525013 FHOD3Q2V2M9 1422 aa30.64■■■□□ 2.5
CAPN1-203ENST00000525013 RAPGEF6Q8TEU7 1601 aa30.63■■■□□ 2.49
CAPN1-203ENST00000525013 ATP10BO94823 1461 aa30.62■■■□□ 2.49
CAPN1-203ENST00000525013 TEX14Q8IWB6 1497 aa30.59■■■□□ 2.49
CAPN1-203ENST00000525013 EFCAB5A4FU69 1503 aa30.58■■■□□ 2.49
CAPN1-203ENST00000525013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.57■■■□□ 2.48
CAPN1-203ENST00000525013 HNRNPUL2Q1KMD3 747 aaKnown RBP30.57■■■□□ 2.48
CAPN1-203ENST00000525013 CFAP43Q8NDM7 1665 aa30.54■■■□□ 2.48
CAPN1-203ENST00000525013 CD109Q6YHK3 1445 aa30.54■■■□□ 2.48
CAPN1-203ENST00000525013 NUP153P49790 1475 aaKnown RBP30.5■■■□□ 2.47
CAPN1-203ENST00000525013 COL17A1Q9UMD9 1497 aaPredicted RBP30.46■■■□□ 2.47
CAPN1-203ENST00000525013 MAGI3Q5TCQ9 1506 aa30.45■■■□□ 2.47
CAPN1-203ENST00000525013 ARHGAP35Q9NRY4 1499 aa30.38■■■□□ 2.45
CAPN1-203ENST00000525013 ABCA9Q8IUA7 1624 aa30.36■■■□□ 2.45
CAPN1-203ENST00000525013 PLEKHD1A6NEE1 506 aa30.36■■■□□ 2.45
CAPN1-203ENST00000525013 ATP1B4Q9UN42 357 aaPredicted RBP30.34■■■□□ 2.45
CAPN1-203ENST00000525013 FMN1Q68DA7 1419 aa30.33■■■□□ 2.45
CAPN1-203ENST00000525013 CDK13Q14004 1512 aaKnown RBP30.27■■■□□ 2.44
CAPN1-203ENST00000525013 KDM4FA0A1W2PPD8 638 aa30.26■■■□□ 2.43
CAPN1-203ENST00000525013 HECW1Q76N89 1606 aa30.24■■■□□ 2.43
CAPN1-203ENST00000525013 ARAP3Q8WWN8 1544 aa30.21■■■□□ 2.43
CAPN1-203ENST00000525013 PHLDB1Q86UU1 1377 aa30.19■■■□□ 2.42
CAPN1-203ENST00000525013 NEO1Q92859 1461 aa30.17■■■□□ 2.42
CAPN1-203ENST00000525013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.15■■■□□ 2.42
CAPN1-203ENST00000525013 CDK11AQ9UQ88 783 aaPredicted RBP30.13■■■□□ 2.41
CAPN1-203ENST00000525013 ADGRL1O94910 1474 aa30.12■■■□□ 2.41
CAPN1-203ENST00000525013 TTC37Q6PGP7 1564 aa30.12■■■□□ 2.41
CAPN1-203ENST00000525013 RAPGEF3O95398 923 aa30.11■■■□□ 2.41
CAPN1-203ENST00000525013 CLIP1P30622 1438 aa30.08■■■□□ 2.41
CAPN1-203ENST00000525013 LRRIQ1Q96JM4 1722 aa30.07■■■□□ 2.4
CAPN1-203ENST00000525013 FANCAO15360 1455 aa30.06■■■□□ 2.4
CAPN1-203ENST00000525013 PCF11O94913 1555 aaKnown RBP30.04■■■□□ 2.4
CAPN1-203ENST00000525013 CFAP74Q9C0B2 1584 aa30.04■■■□□ 2.4
CAPN1-203ENST00000525013 CASKIN1Q8WXD9 1431 aa30.04■■■□□ 2.4
CAPN1-203ENST00000525013 AKNAQ7Z591 1439 aa30.03■■■□□ 2.4
CAPN1-203ENST00000525013 TROQ12816 1431 aaPredicted RBP29.99■■■□□ 2.39
CAPN1-203ENST00000525013 KIF14Q15058 1648 aa29.98■■■□□ 2.39
CAPN1-203ENST00000525013 DENND4BO75064 1496 aaPredicted RBP29.98■■■□□ 2.39
CAPN1-203ENST00000525013 FRMPD1Q5SYB0 1578 aa29.98■■■□□ 2.39
CAPN1-203ENST00000525013 CCDC18Q5T9S5 1454 aa29.97■■■□□ 2.39
CAPN1-203ENST00000525013 PLCH2O75038 1416 aa29.96■■■□□ 2.39
CAPN1-203ENST00000525013 MYO5CQ9NQX4 1742 aa29.96■■■□□ 2.39
CAPN1-203ENST00000525013 FYCO1Q9BQS8 1478 aa29.93■■■□□ 2.38
CAPN1-203ENST00000525013 RICTORQ6R327 1708 aa29.93■■■□□ 2.38
CAPN1-203ENST00000525013 EFCAB2Q5VUJ9 269 aa29.9■■■□□ 2.38
CAPN1-203ENST00000525013 SCAPERQ9BY12 1400 aa29.86■■■□□ 2.37
CAPN1-203ENST00000525013 ARID4BQ4LE39 1312 aaPredicted RBP29.84■■■□□ 2.37
CAPN1-203ENST00000525013 ARHGAP5Q13017 1502 aa29.84■■■□□ 2.37
CAPN1-203ENST00000525013 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms