RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
CTSB-207ENST00000524654 PRG4Q92954 1404 aaPredicted RBP18.77■□□□□ 0.6
CTSB-207ENST00000524654 KIAA0586Q9BVV6 1533 aa18.77■□□□□ 0.6
CTSB-207ENST00000524654 RAPGEF2Q9Y4G8 1499 aa18.67■□□□□ 0.58
CTSB-207ENST00000524654 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
CTSB-207ENST00000524654 IQGAP2Q13576 1575 aa18.59■□□□□ 0.57
CTSB-207ENST00000524654 PRXQ9BXM0 1461 aa18.58■□□□□ 0.57
CTSB-207ENST00000524654 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
CTSB-207ENST00000524654 PTPRGP23470 1445 aa18.53■□□□□ 0.56
CTSB-207ENST00000524654 DISP1Q96F81 1524 aa18.52■□□□□ 0.56
CTSB-207ENST00000524654 UGGT2Q9NYU1 1516 aa18.52■□□□□ 0.56
CTSB-207ENST00000524654 TNIKQ9UKE5 1360 aa18.52■□□□□ 0.55
CTSB-207ENST00000524654 CSRNP3Q8WYN3 585 aa18.51■□□□□ 0.55
CTSB-207ENST00000524654 ADCY10Q96PN6 1610 aa18.49■□□□□ 0.55
CTSB-207ENST00000524654 EEA1Q15075 1411 aa18.48■□□□□ 0.55
CTSB-207ENST00000524654 NPM1P06748 294 aaKnown RBP eCLIP18.47■□□□□ 0.55
CTSB-207ENST00000524654 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
CTSB-207ENST00000524654 TTBK1Q5TCY1 1321 aaPredicted RBP18.44■□□□□ 0.54
CTSB-207ENST00000524654 MAPKBP1O60336 1514 aa18.44■□□□□ 0.54
CTSB-207ENST00000524654 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
CTSB-207ENST00000524654 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
CTSB-207ENST00000524654 UHRF1BP1LA0JNW5 1464 aa18.4■□□□□ 0.54
CTSB-207ENST00000524654 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
CTSB-207ENST00000524654 ABCC10Q5T3U5 1492 aa18.39■□□□□ 0.53
CTSB-207ENST00000524654 ABCC2Q92887 1545 aa18.39■□□□□ 0.53
CTSB-207ENST00000524654 GOLGA3Q08378 1498 aa18.38■□□□□ 0.53
CTSB-207ENST00000524654 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
CTSB-207ENST00000524654 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
CTSB-207ENST00000524654 DIP2BQ9P265 1576 aa18.31■□□□□ 0.52
CTSB-207ENST00000524654 KDM5BQ9UGL1 1544 aa18.31■□□□□ 0.52
CTSB-207ENST00000524654 KIF13AQ9H1H9 1805 aa18.3■□□□□ 0.52
CTSB-207ENST00000524654 PLB1Q6P1J6 1458 aa18.29■□□□□ 0.52
CTSB-207ENST00000524654 ASXL2Q76L83 1435 aa18.29■□□□□ 0.52
CTSB-207ENST00000524654 KIF21BO75037 1637 aa18.27■□□□□ 0.52
CTSB-207ENST00000524654 ABCA8O94911 1581 aa18.25■□□□□ 0.51
CTSB-207ENST00000524654 P3H3Q8IVL6 736 aa18.24■□□□□ 0.51
CTSB-207ENST00000524654 SAMD9Q5K651 1589 aa18.24■□□□□ 0.51
CTSB-207ENST00000524654 ZCCHC11Q5TAX3 1644 aaKnown RBP18.21■□□□□ 0.51
CTSB-207ENST00000524654 GLI2P10070 1586 aa18.19■□□□□ 0.5
CTSB-207ENST00000524654 EPRSP07814 1512 aaKnown RBP18.18■□□□□ 0.5
CTSB-207ENST00000524654 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
CTSB-207ENST00000524654 WDR7Q9Y4E6 1490 aa18.16■□□□□ 0.5
CTSB-207ENST00000524654 UBTFP17480 764 aaKnown RBP18.14■□□□□ 0.49
CTSB-207ENST00000524654 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
CTSB-207ENST00000524654 ATP10BO94823 1461 aa18.13■□□□□ 0.49
CTSB-207ENST00000524654 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
CTSB-207ENST00000524654 EFCAB5A4FU69 1503 aa18.12■□□□□ 0.49
CTSB-207ENST00000524654 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
CTSB-207ENST00000524654 RAPGEF6Q8TEU7 1601 aa18.08■□□□□ 0.48
CTSB-207ENST00000524654 MAP3K4Q9Y6R4 1608 aa18.08■□□□□ 0.48
CTSB-207ENST00000524654 NUP153P49790 1475 aaKnown RBP18.07■□□□□ 0.48
CTSB-207ENST00000524654 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
CTSB-207ENST00000524654 KCNH8Q96L42 1107 aa18.06■□□□□ 0.48
CTSB-207ENST00000524654 KDM6BO15054 1643 aa18.05■□□□□ 0.48
CTSB-207ENST00000524654 TSPOAP1O95153 1857 aa18.04■□□□□ 0.48
CTSB-207ENST00000524654 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
CTSB-207ENST00000524654 TEX14Q8IWB6 1497 aa18.02■□□□□ 0.48
CTSB-207ENST00000524654 CD109Q6YHK3 1445 aa18.01■□□□□ 0.47
CTSB-207ENST00000524654 MAGI3Q5TCQ9 1506 aa18■□□□□ 0.47
CTSB-207ENST00000524654 COL17A1Q9UMD9 1497 aaPredicted RBP18■□□□□ 0.47
CTSB-207ENST00000524654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
CTSB-207ENST00000524654 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
CTSB-207ENST00000524654 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
CTSB-207ENST00000524654 CFAP43Q8NDM7 1665 aa17.96■□□□□ 0.47
CTSB-207ENST00000524654 PLEKHD1A6NEE1 506 aa17.93■□□□□ 0.46
CTSB-207ENST00000524654 ABCA9Q8IUA7 1624 aa17.93■□□□□ 0.46
CTSB-207ENST00000524654 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
CTSB-207ENST00000524654 HECW1Q76N89 1606 aa17.87■□□□□ 0.45
CTSB-207ENST00000524654 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
CTSB-207ENST00000524654 PHLDB1Q86UU1 1377 aa17.86■□□□□ 0.45
CTSB-207ENST00000524654 CLIP1P30622 1438 aa17.85■□□□□ 0.45
CTSB-207ENST00000524654 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
CTSB-207ENST00000524654 ARAP3Q8WWN8 1544 aa17.85■□□□□ 0.45
CTSB-207ENST00000524654 NEO1Q92859 1461 aa17.83■□□□□ 0.45
CTSB-207ENST00000524654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTSB-207ENST00000524654 CASKIN1Q8WXD9 1431 aa17.82■□□□□ 0.44
CTSB-207ENST00000524654 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
CTSB-207ENST00000524654 KDM4FA0A1W2PPD8 638 aa17.8■□□□□ 0.44
CTSB-207ENST00000524654 PCF11O94913 1555 aaKnown RBP17.78■□□□□ 0.44
CTSB-207ENST00000524654 TTC37Q6PGP7 1564 aa17.78■□□□□ 0.44
CTSB-207ENST00000524654 TROQ12816 1431 aaPredicted RBP17.76■□□□□ 0.43
CTSB-207ENST00000524654 FANCAO15360 1455 aa17.75■□□□□ 0.43
CTSB-207ENST00000524654 FYCO1Q9BQS8 1478 aa17.75■□□□□ 0.43
CTSB-207ENST00000524654 PLCH2O75038 1416 aa17.75■□□□□ 0.43
CTSB-207ENST00000524654 RAPGEF3O95398 923 aa17.75■□□□□ 0.43
CTSB-207ENST00000524654 CCDC18Q5T9S5 1454 aa17.75■□□□□ 0.43
CTSB-207ENST00000524654 AKNAQ7Z591 1439 aa17.73■□□□□ 0.43
CTSB-207ENST00000524654 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
CTSB-207ENST00000524654 CEP162Q5TB80 1403 aa17.72■□□□□ 0.43
CTSB-207ENST00000524654 ADGRL1O94910 1474 aa17.7■□□□□ 0.42
CTSB-207ENST00000524654 KIF14Q15058 1648 aa17.7■□□□□ 0.42
CTSB-207ENST00000524654 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
CTSB-207ENST00000524654 DENND4BO75064 1496 aaPredicted RBP17.69■□□□□ 0.42
CTSB-207ENST00000524654 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
CTSB-207ENST00000524654 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
CTSB-207ENST00000524654 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
CTSB-207ENST00000524654 SCAPERQ9BY12 1400 aa17.64■□□□□ 0.41
CTSB-207ENST00000524654 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
CTSB-207ENST00000524654 RICTORQ6R327 1708 aa17.61■□□□□ 0.41
CTSB-207ENST00000524654 MYO5CQ9NQX4 1742 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms