RNA–Protein interactions for RNA: ENST00000524447.6

PSMC3-202, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 3

Gene PSMC3, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-202ENST00000524447 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
PSMC3-202ENST00000524447 NUP160Q12769 1436 aa25.03■■□□□ 1.6
PSMC3-202ENST00000524447 CEP170Q5SW79 1584 aa25.01■■□□□ 1.59
PSMC3-202ENST00000524447 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
PSMC3-202ENST00000524447 TRHP20396 242 aaPredicted RBP24.91■■□□□ 1.58
PSMC3-202ENST00000524447 EHMT2Q96KQ7 1210 aa24.89■■□□□ 1.58
PSMC3-202ENST00000524447 KIAA0586Q9BVV6 1533 aa24.88■■□□□ 1.57
PSMC3-202ENST00000524447 JPH4Q96JJ6 628 aa24.86■■□□□ 1.57
PSMC3-202ENST00000524447 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
PSMC3-202ENST00000524447 KIF21BO75037 1637 aa24.76■■□□□ 1.55
PSMC3-202ENST00000524447 UBTFP17480 764 aaKnown RBP24.76■■□□□ 1.55
PSMC3-202ENST00000524447 IQGAP2Q13576 1575 aa24.76■■□□□ 1.55
PSMC3-202ENST00000524447 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
PSMC3-202ENST00000524447 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
PSMC3-202ENST00000524447 ERCC6L2Q5T890 1561 aa24.69■■□□□ 1.54
PSMC3-202ENST00000524447 RANGAP1P46060 587 aaPredicted RBP24.68■■□□□ 1.54
PSMC3-202ENST00000524447 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
PSMC3-202ENST00000524447 CTTNBP2Q8WZ74 1663 aa24.66■■□□□ 1.54
PSMC3-202ENST00000524447 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.54
PSMC3-202ENST00000524447 UGGT2Q9NYU1 1516 aa24.61■■□□□ 1.53
PSMC3-202ENST00000524447 DISP1Q96F81 1524 aa24.56■■□□□ 1.52
PSMC3-202ENST00000524447 TNIKQ9UKE5 1360 aa24.55■■□□□ 1.52
PSMC3-202ENST00000524447 P3H3Q8IVL6 736 aa24.54■■□□□ 1.52
PSMC3-202ENST00000524447 PTPRGP23470 1445 aa24.53■■□□□ 1.52
PSMC3-202ENST00000524447 KIAA0556O60303 1618 aa24.5■■□□□ 1.51
PSMC3-202ENST00000524447 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
PSMC3-202ENST00000524447 SAMD9Q5K651 1589 aa24.39■■□□□ 1.5
PSMC3-202ENST00000524447 FHOD3Q2V2M9 1422 aa24.39■■□□□ 1.5
PSMC3-202ENST00000524447 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.49
PSMC3-202ENST00000524447 EFCAB5A4FU69 1503 aa24.39■■□□□ 1.49
PSMC3-202ENST00000524447 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
PSMC3-202ENST00000524447 CLIP1P30622 1438 aa24.32■■□□□ 1.48
PSMC3-202ENST00000524447 ARHGAP35Q9NRY4 1499 aa24.31■■□□□ 1.48
PSMC3-202ENST00000524447 PLB1Q6P1J6 1458 aa24.3■■□□□ 1.48
PSMC3-202ENST00000524447 ADCY10Q96PN6 1610 aa24.28■■□□□ 1.48
PSMC3-202ENST00000524447 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
PSMC3-202ENST00000524447 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
PSMC3-202ENST00000524447 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
PSMC3-202ENST00000524447 ARID3CA6NKF2 412 aa24.23■■□□□ 1.47
PSMC3-202ENST00000524447 FAM69CQ0P6D2 419 aa24.22■■□□□ 1.47
PSMC3-202ENST00000524447 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
PSMC3-202ENST00000524447 ABCA8O94911 1581 aa24.21■■□□□ 1.47
PSMC3-202ENST00000524447 MAPKBP1O60336 1514 aa24.21■■□□□ 1.47
PSMC3-202ENST00000524447 FMN1Q68DA7 1419 aa24.21■■□□□ 1.47
PSMC3-202ENST00000524447 ABCC10Q5T3U5 1492 aa24.19■■□□□ 1.46
PSMC3-202ENST00000524447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.16■■□□□ 1.46
PSMC3-202ENST00000524447 HNRNPUL2Q1KMD3 747 aaKnown RBP24.16■■□□□ 1.46
PSMC3-202ENST00000524447 RAPGEF6Q8TEU7 1601 aa24.14■■□□□ 1.46
PSMC3-202ENST00000524447 KDM5BQ9UGL1 1544 aa24.14■■□□□ 1.45
PSMC3-202ENST00000524447 AEBP2Q6ZN18 517 aaPredicted RBP24.13■■□□□ 1.45
PSMC3-202ENST00000524447 KIF13AQ9H1H9 1805 aa24.12■■□□□ 1.45
PSMC3-202ENST00000524447 NUP153P49790 1475 aaKnown RBP24.08■■□□□ 1.45
PSMC3-202ENST00000524447 ASXL2Q76L83 1435 aa24.08■■□□□ 1.44
PSMC3-202ENST00000524447 DIP2BQ9P265 1576 aa24.07■■□□□ 1.44
PSMC3-202ENST00000524447 ATP10BO94823 1461 aa24.07■■□□□ 1.44
PSMC3-202ENST00000524447 ZCCHC11Q5TAX3 1644 aaKnown RBP24.06■■□□□ 1.44
PSMC3-202ENST00000524447 HECW1Q76N89 1606 aa24.02■■□□□ 1.44
PSMC3-202ENST00000524447 CASKIN1Q8WXD9 1431 aa24.02■■□□□ 1.44
PSMC3-202ENST00000524447 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
PSMC3-202ENST00000524447 KCNH8Q96L42 1107 aa23.99■■□□□ 1.43
PSMC3-202ENST00000524447 FYCO1Q9BQS8 1478 aa23.98■■□□□ 1.43
PSMC3-202ENST00000524447 WDR7Q9Y4E6 1490 aa23.98■■□□□ 1.43
PSMC3-202ENST00000524447 PLEKHD1A6NEE1 506 aa23.97■■□□□ 1.43
PSMC3-202ENST00000524447 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
PSMC3-202ENST00000524447 EPRSP07814 1512 aaKnown RBP23.96■■□□□ 1.43
PSMC3-202ENST00000524447 CDK11AQ9UQ88 783 aaPredicted RBP23.95■■□□□ 1.42
PSMC3-202ENST00000524447 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
PSMC3-202ENST00000524447 CCDC18Q5T9S5 1454 aa23.91■■□□□ 1.42
PSMC3-202ENST00000524447 GLI2P10070 1586 aa23.86■■□□□ 1.41
PSMC3-202ENST00000524447 KDM6BO15054 1643 aa23.85■■□□□ 1.41
PSMC3-202ENST00000524447 TSPOAP1O95153 1857 aa23.81■■□□□ 1.4
PSMC3-202ENST00000524447 APLP2Q06481 763 aa23.8■■□□□ 1.4
PSMC3-202ENST00000524447 TROQ12816 1431 aaPredicted RBP23.79■■□□□ 1.4
PSMC3-202ENST00000524447 CD109Q6YHK3 1445 aa23.77■■□□□ 1.4
PSMC3-202ENST00000524447 LRRIQ1Q96JM4 1722 aa23.77■■□□□ 1.4
PSMC3-202ENST00000524447 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
PSMC3-202ENST00000524447 TEX14Q8IWB6 1497 aa23.74■■□□□ 1.39
PSMC3-202ENST00000524447 KIF14Q15058 1648 aa23.7■■□□□ 1.38
PSMC3-202ENST00000524447 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
PSMC3-202ENST00000524447 MAP3K4Q9Y6R4 1608 aa23.69■■□□□ 1.38
PSMC3-202ENST00000524447 CFAP43Q8NDM7 1665 aa23.67■■□□□ 1.38
PSMC3-202ENST00000524447 ABCA9Q8IUA7 1624 aa23.67■■□□□ 1.38
PSMC3-202ENST00000524447 TIAM1Q13009 1591 aa23.67■■□□□ 1.38
PSMC3-202ENST00000524447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.67■■□□□ 1.383e-6■■□□□ 14
PSMC3-202ENST00000524447 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
PSMC3-202ENST00000524447 TTC37Q6PGP7 1564 aa23.64■■□□□ 1.37
PSMC3-202ENST00000524447 EHBP1L1Q8N3D4 1523 aa23.64■■□□□ 1.37
PSMC3-202ENST00000524447 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
PSMC3-202ENST00000524447 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
PSMC3-202ENST00000524447 KANK4Q5T7N3 995 aaPredicted RBP23.61■■□□□ 1.37
PSMC3-202ENST00000524447 LRRC9Q6ZRR7 1453 aa23.6■■□□□ 1.37
PSMC3-202ENST00000524447 COL17A1Q9UMD9 1497 aaPredicted RBP23.59■■□□□ 1.37
PSMC3-202ENST00000524447 CCNB3Q8WWL7 1395 aa23.58■■□□□ 1.37
PSMC3-202ENST00000524447 PLCH2O75038 1416 aa23.57■■□□□ 1.36
PSMC3-202ENST00000524447 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
PSMC3-202ENST00000524447 FANCAO15360 1455 aa23.55■■□□□ 1.36
PSMC3-202ENST00000524447 ARHGAP5Q13017 1502 aa23.53■■□□□ 1.36
PSMC3-202ENST00000524447 NCOA2Q15596 1464 aa23.52■■□□□ 1.36
PSMC3-202ENST00000524447 NEO1Q92859 1461 aa23.52■■□□□ 1.36
PSMC3-202ENST00000524447 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms