RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
LDLRAD3-202ENST00000524419 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
LDLRAD3-202ENST00000524419 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
LDLRAD3-202ENST00000524419 FHAD1B1AJZ9 1412 aa20.74■□□□□ 0.91
LDLRAD3-202ENST00000524419 TDRD9Q8NDG6 1382 aaKnown RBP20.74■□□□□ 0.91
LDLRAD3-202ENST00000524419 CFAP43Q8NDM7 1665 aa20.7■□□□□ 0.9
LDLRAD3-202ENST00000524419 PCF11O94913 1555 aaKnown RBP20.7■□□□□ 0.9
LDLRAD3-202ENST00000524419 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
LDLRAD3-202ENST00000524419 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
LDLRAD3-202ENST00000524419 FHOD3Q2V2M9 1422 aa20.64■□□□□ 0.9
LDLRAD3-202ENST00000524419 FYCO1Q9BQS8 1478 aa20.64■□□□□ 0.89
LDLRAD3-202ENST00000524419 AQRO60306 1485 aaKnown RBP eCLIP20.62■□□□□ 0.89
LDLRAD3-202ENST00000524419 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
LDLRAD3-202ENST00000524419 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
LDLRAD3-202ENST00000524419 SAMD9Q5K651 1589 aa20.61■□□□□ 0.89
LDLRAD3-202ENST00000524419 WDR62O43379 1518 aa20.6■□□□□ 0.89
LDLRAD3-202ENST00000524419 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
LDLRAD3-202ENST00000524419 CCNB3Q8WWL7 1395 aa20.59■□□□□ 0.89
LDLRAD3-202ENST00000524419 CASKIN1Q8WXD9 1431 aa20.59■□□□□ 0.89
LDLRAD3-202ENST00000524419 ADAMTS12P58397 1594 aa20.57■□□□□ 0.88
LDLRAD3-202ENST00000524419 FMN1Q68DA7 1419 aa20.56■□□□□ 0.88
LDLRAD3-202ENST00000524419 IFT140Q96RY7 1462 aa20.56■□□□□ 0.88
LDLRAD3-202ENST00000524419 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
LDLRAD3-202ENST00000524419 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
LDLRAD3-202ENST00000524419 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
LDLRAD3-202ENST00000524419 IQGAP2Q13576 1575 aa20.47■□□□□ 0.87
LDLRAD3-202ENST00000524419 PHLDB1Q86UU1 1377 aa20.45■□□□□ 0.86
LDLRAD3-202ENST00000524419 ZNF608Q9ULD9 1512 aaPredicted RBP20.44■□□□□ 0.86
LDLRAD3-202ENST00000524419 LRRIQ1Q96JM4 1722 aa20.43■□□□□ 0.86
LDLRAD3-202ENST00000524419 EIF4G3O43432 1585 aaKnown RBP20.42■□□□□ 0.86
LDLRAD3-202ENST00000524419 CLSPNQ9HAW4 1339 aa20.42■□□□□ 0.86
LDLRAD3-202ENST00000524419 DHX57Q6P158 1386 aaKnown RBP20.41■□□□□ 0.86
LDLRAD3-202ENST00000524419 ITGAEP38570 1179 aa20.36■□□□□ 0.85
LDLRAD3-202ENST00000524419 HECW1Q76N89 1606 aa20.35■□□□□ 0.85
LDLRAD3-202ENST00000524419 UGGT2Q9NYU1 1516 aa20.34■□□□□ 0.85
LDLRAD3-202ENST00000524419 DIEXFQ68CQ4 756 aaKnown RBP20.34■□□□□ 0.85
LDLRAD3-202ENST00000524419 MTUS2Q5JR59 1369 aa20.34■□□□□ 0.85
LDLRAD3-202ENST00000524419 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.84
LDLRAD3-202ENST00000524419 EHBP1L1Q8N3D4 1523 aa20.33■□□□□ 0.84
LDLRAD3-202ENST00000524419 SUPT6HQ7KZ85 1726 aaKnown RBP20.32■□□□□ 0.84
LDLRAD3-202ENST00000524419 FAM50AQ14320 339 aaKnown RBP20.32■□□□□ 0.84
LDLRAD3-202ENST00000524419 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.31■□□□□ 0.84
LDLRAD3-202ENST00000524419 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
LDLRAD3-202ENST00000524419 GRIN2AQ12879 1464 aa20.3■□□□□ 0.84
LDLRAD3-202ENST00000524419 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
LDLRAD3-202ENST00000524419 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
LDLRAD3-202ENST00000524419 SETD5Q9C0A6 1442 aa20.29■□□□□ 0.84
LDLRAD3-202ENST00000524419 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
LDLRAD3-202ENST00000524419 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
LDLRAD3-202ENST00000524419 KIAA0556O60303 1618 aa20.25■□□□□ 0.83
LDLRAD3-202ENST00000524419 NCOA2Q15596 1464 aa20.25■□□□□ 0.83
LDLRAD3-202ENST00000524419 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
LDLRAD3-202ENST00000524419 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
LDLRAD3-202ENST00000524419 EPRSP07814 1512 aaKnown RBP20.21■□□□□ 0.83
LDLRAD3-202ENST00000524419 MAGI3Q5TCQ9 1506 aa20.2■□□□□ 0.82
LDLRAD3-202ENST00000524419 ARHGEF11O15085 1522 aa20.2■□□□□ 0.82
LDLRAD3-202ENST00000524419 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
LDLRAD3-202ENST00000524419 DISP1Q96F81 1524 aa20.19■□□□□ 0.82
LDLRAD3-202ENST00000524419 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
LDLRAD3-202ENST00000524419 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
LDLRAD3-202ENST00000524419 PTPN23Q9H3S7 1636 aa20.16■□□□□ 0.82
LDLRAD3-202ENST00000524419 CDK13Q14004 1512 aaKnown RBP20.15■□□□□ 0.82
LDLRAD3-202ENST00000524419 RAPGEF6Q8TEU7 1601 aa20.13■□□□□ 0.81
LDLRAD3-202ENST00000524419 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
LDLRAD3-202ENST00000524419 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
LDLRAD3-202ENST00000524419 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.81
LDLRAD3-202ENST00000524419 NUP160Q12769 1436 aa20.08■□□□□ 0.81
LDLRAD3-202ENST00000524419 TCOF1Q13428 1488 aaKnown RBP20.08■□□□□ 0.81
LDLRAD3-202ENST00000524419 HFM1A2PYH4 1435 aa20.07■□□□□ 0.8
LDLRAD3-202ENST00000524419 NUP153P49790 1475 aaKnown RBP20.06■□□□□ 0.8
LDLRAD3-202ENST00000524419 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
LDLRAD3-202ENST00000524419 PTPRKQ15262 1439 aa20.05■□□□□ 0.8
LDLRAD3-202ENST00000524419 FBLN2P98095 1184 aa20.04■□□□□ 0.8
LDLRAD3-202ENST00000524419 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
LDLRAD3-202ENST00000524419 MIA2Q96PC5 1412 aa20.03■□□□□ 0.8
LDLRAD3-202ENST00000524419 CARMIL2Q6F5E8 1435 aa20.03■□□□□ 0.8
LDLRAD3-202ENST00000524419 GCC2Q8IWJ2 1684 aa20.01■□□□□ 0.79
LDLRAD3-202ENST00000524419 ARID3CA6NKF2 412 aa20■□□□□ 0.79
LDLRAD3-202ENST00000524419 NAIPQ13075 1403 aa19.99■□□□□ 0.79
LDLRAD3-202ENST00000524419 UACAQ9BZF9 1416 aa19.96■□□□□ 0.79
LDLRAD3-202ENST00000524419 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
LDLRAD3-202ENST00000524419 AKNAQ7Z591 1439 aa19.95■□□□□ 0.78
LDLRAD3-202ENST00000524419 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
LDLRAD3-202ENST00000524419 PLB1Q6P1J6 1458 aa19.94■□□□□ 0.78
LDLRAD3-202ENST00000524419 ADCY10Q96PN6 1610 aa19.93■□□□□ 0.78
LDLRAD3-202ENST00000524419 ITSN2Q9NZM3 1697 aa19.92■□□□□ 0.78
LDLRAD3-202ENST00000524419 TROQ12816 1431 aaPredicted RBP19.92■□□□□ 0.78
LDLRAD3-202ENST00000524419 CHD1O14646 1710 aa19.91■□□□□ 0.78
LDLRAD3-202ENST00000524419 TIMELESSQ9UNS1 1208 aa19.91■□□□□ 0.78
LDLRAD3-202ENST00000524419 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
LDLRAD3-202ENST00000524419 DNMT1P26358 1616 aaKnown RBP19.89■□□□□ 0.77
LDLRAD3-202ENST00000524419 ABCA8O94911 1581 aa19.89■□□□□ 0.77
LDLRAD3-202ENST00000524419 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
LDLRAD3-202ENST00000524419 MIER1Q8N108 512 aa19.87■□□□□ 0.77
LDLRAD3-202ENST00000524419 PRG4Q92954 1404 aaPredicted RBP19.86■□□□□ 0.77
LDLRAD3-202ENST00000524419 DAPK1P53355 1430 aa19.85■□□□□ 0.77
LDLRAD3-202ENST00000524419 KIF14Q15058 1648 aa19.85■□□□□ 0.77
LDLRAD3-202ENST00000524419 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
LDLRAD3-202ENST00000524419 RRP7BPQ9NSQ0 103 aa19.84■□□□□ 0.77
LDLRAD3-202ENST00000524419 KDM6BO15054 1643 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms