RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
SPARC-206ENST00000524277 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
SPARC-206ENST00000524277 CUL7Q14999 1698 aa20.56■□□□□ 0.88
SPARC-206ENST00000524277 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
SPARC-206ENST00000524277 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
SPARC-206ENST00000524277 MAPKBP1O60336 1514 aa20.4■□□□□ 0.86
SPARC-206ENST00000524277 CARMIL2Q6F5E8 1435 aa20.4■□□□□ 0.86
SPARC-206ENST00000524277 ABCC10Q5T3U5 1492 aa20.39■□□□□ 0.85
SPARC-206ENST00000524277 FAM69CQ0P6D2 419 aa20.39■□□□□ 0.85
SPARC-206ENST00000524277 PTPRGP23470 1445 aa20.38■□□□□ 0.85
SPARC-206ENST00000524277 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
SPARC-206ENST00000524277 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
SPARC-206ENST00000524277 KIF13AQ9H1H9 1805 aa20.35■□□□□ 0.85
SPARC-206ENST00000524277 ADCY10Q96PN6 1610 aa20.35■□□□□ 0.85
SPARC-206ENST00000524277 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
SPARC-206ENST00000524277 IQGAP2Q13576 1575 aa20.31■□□□□ 0.84
SPARC-206ENST00000524277 DIP2BQ9P265 1576 aa20.27■□□□□ 0.84
SPARC-206ENST00000524277 ABCC2Q92887 1545 aa20.25■□□□□ 0.83
SPARC-206ENST00000524277 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
SPARC-206ENST00000524277 TTBK1Q5TCY1 1321 aaPredicted RBP20.23■□□□□ 0.83
SPARC-206ENST00000524277 UACAQ9BZF9 1416 aa20.22■□□□□ 0.83
SPARC-206ENST00000524277 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
SPARC-206ENST00000524277 PLB1Q6P1J6 1458 aa20.21■□□□□ 0.83
SPARC-206ENST00000524277 DISP1Q96F81 1524 aa20.21■□□□□ 0.83
SPARC-206ENST00000524277 ASXL2Q76L83 1435 aa20.16■□□□□ 0.82
SPARC-206ENST00000524277 GLI2P10070 1586 aa20.12■□□□□ 0.81
SPARC-206ENST00000524277 KDM5BQ9UGL1 1544 aa20.12■□□□□ 0.81
SPARC-206ENST00000524277 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
SPARC-206ENST00000524277 KIAA0556O60303 1618 aa20.11■□□□□ 0.81
SPARC-206ENST00000524277 KDM6BO15054 1643 aa20.1■□□□□ 0.81
SPARC-206ENST00000524277 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
SPARC-206ENST00000524277 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.81
SPARC-206ENST00000524277 TSPOAP1O95153 1857 aa20.07■□□□□ 0.8
SPARC-206ENST00000524277 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
SPARC-206ENST00000524277 EPRSP07814 1512 aaKnown RBP20.04■□□□□ 0.8
SPARC-206ENST00000524277 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
SPARC-206ENST00000524277 ZCCHC11Q5TAX3 1644 aaKnown RBP19.99■□□□□ 0.79
SPARC-206ENST00000524277 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
SPARC-206ENST00000524277 WDR7Q9Y4E6 1490 aa19.97■□□□□ 0.79
SPARC-206ENST00000524277 PPRC1Q5VV67 1664 aaKnown RBP19.95■□□□□ 0.78
SPARC-206ENST00000524277 MAP3K4Q9Y6R4 1608 aa19.94■□□□□ 0.78
SPARC-206ENST00000524277 EEA1Q15075 1411 aa19.94■□□□□ 0.78
SPARC-206ENST00000524277 ABCA8O94911 1581 aa19.94■□□□□ 0.78
SPARC-206ENST00000524277 KDM4FA0A1W2PPD8 638 aa19.92■□□□□ 0.78
SPARC-206ENST00000524277 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
SPARC-206ENST00000524277 KCNH8Q96L42 1107 aa19.88■□□□□ 0.77
SPARC-206ENST00000524277 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
SPARC-206ENST00000524277 COL17A1Q9UMD9 1497 aaPredicted RBP19.86■□□□□ 0.77
SPARC-206ENST00000524277 P3H3Q8IVL6 736 aa19.84■□□□□ 0.77
SPARC-206ENST00000524277 CFAP43Q8NDM7 1665 aa19.83■□□□□ 0.76
SPARC-206ENST00000524277 ATP10BO94823 1461 aa19.8■□□□□ 0.76
SPARC-206ENST00000524277 SAMD9Q5K651 1589 aa19.79■□□□□ 0.76
SPARC-206ENST00000524277 PHLDB1Q86UU1 1377 aa19.78■□□□□ 0.76
SPARC-206ENST00000524277 ADGRL1O94910 1474 aa19.74■□□□□ 0.75
SPARC-206ENST00000524277 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
SPARC-206ENST00000524277 ARID3CA6NKF2 412 aa19.72■□□□□ 0.75
SPARC-206ENST00000524277 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.72■□□□□ 0.75
SPARC-206ENST00000524277 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
SPARC-206ENST00000524277 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
SPARC-206ENST00000524277 ABCA9Q8IUA7 1624 aa19.68■□□□□ 0.74
SPARC-206ENST00000524277 KIF21BO75037 1637 aa19.67■□□□□ 0.74
SPARC-206ENST00000524277 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
SPARC-206ENST00000524277 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
SPARC-206ENST00000524277 EFCAB5A4FU69 1503 aa19.66■□□□□ 0.74
SPARC-206ENST00000524277 FHOD3Q2V2M9 1422 aa19.66■□□□□ 0.74
SPARC-206ENST00000524277 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
SPARC-206ENST00000524277 NEO1Q92859 1461 aa19.65■□□□□ 0.74
SPARC-206ENST00000524277 UBTFP17480 764 aaKnown RBP19.59■□□□□ 0.73
SPARC-206ENST00000524277 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
SPARC-206ENST00000524277 RAPGEF3O95398 923 aa19.55■□□□□ 0.72
SPARC-206ENST00000524277 FMN1Q68DA7 1419 aa19.53■□□□□ 0.72
SPARC-206ENST00000524277 CDK11AQ9UQ88 783 aaPredicted RBP19.51■□□□□ 0.71
SPARC-206ENST00000524277 AKNAQ7Z591 1439 aa19.5■□□□□ 0.71
SPARC-206ENST00000524277 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
SPARC-206ENST00000524277 CFAP74Q9C0B2 1584 aa19.48■□□□□ 0.71
SPARC-206ENST00000524277 FANCAO15360 1455 aa19.48■□□□□ 0.71
SPARC-206ENST00000524277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
SPARC-206ENST00000524277 ARHGAP35Q9NRY4 1499 aa19.44■□□□□ 0.7
SPARC-206ENST00000524277 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
SPARC-206ENST00000524277 ARID4BQ4LE39 1312 aaPredicted RBP19.44■□□□□ 0.7
SPARC-206ENST00000524277 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
SPARC-206ENST00000524277 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
SPARC-206ENST00000524277 PLCH2O75038 1416 aa19.42■□□□□ 0.7
SPARC-206ENST00000524277 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
SPARC-206ENST00000524277 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
SPARC-206ENST00000524277 CDK13Q14004 1512 aaKnown RBP19.41■□□□□ 0.7
SPARC-206ENST00000524277 MAGI2Q86UL8 1455 aa19.41■□□□□ 0.7
SPARC-206ENST00000524277 ADAMTSL3P82987 1691 aa19.4■□□□□ 0.7
SPARC-206ENST00000524277 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
SPARC-206ENST00000524277 PTPRMP28827 1452 aa19.39■□□□□ 0.69
SPARC-206ENST00000524277 TTC37Q6PGP7 1564 aa19.39■□□□□ 0.69
SPARC-206ENST00000524277 RICTORQ6R327 1708 aa19.37■□□□□ 0.69
SPARC-206ENST00000524277 ARHGEF40Q8TER5 1519 aa19.37■□□□□ 0.69
SPARC-206ENST00000524277 POGZQ7Z3K3 1410 aa19.37■□□□□ 0.69
SPARC-206ENST00000524277 ZMYM4Q5VZL5 1548 aa19.36■□□□□ 0.69
SPARC-206ENST00000524277 CLIP1P30622 1438 aa19.35■□□□□ 0.69
SPARC-206ENST00000524277 SCAPERQ9BY12 1400 aa19.35■□□□□ 0.69
SPARC-206ENST00000524277 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
SPARC-206ENST00000524277 TROQ12816 1431 aaPredicted RBP19.34■□□□□ 0.69
SPARC-206ENST00000524277 ZFYVE16Q7Z3T8 1539 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms