RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 RAPGEF2Q9Y4G8 1499 aa20.18■□□□□ 0.82
CLN8-207ENST00000524258 KIAA0586Q9BVV6 1533 aa20.18■□□□□ 0.82
CLN8-207ENST00000524258 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
CLN8-207ENST00000524258 ERCC6L2Q5T890 1561 aa20.17■□□□□ 0.82
CLN8-207ENST00000524258 CYB5RLQ6IPT4 315 aa20.15■□□□□ 0.82
CLN8-207ENST00000524258 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
CLN8-207ENST00000524258 EEA1Q15075 1411 aa20.12■□□□□ 0.81
CLN8-207ENST00000524258 PRG4Q92954 1404 aaPredicted RBP20.1■□□□□ 0.81
CLN8-207ENST00000524258 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
CLN8-207ENST00000524258 IQGAP2Q13576 1575 aa20.01■□□□□ 0.79
CLN8-207ENST00000524258 UGGT2Q9NYU1 1516 aa19.97■□□□□ 0.79
CLN8-207ENST00000524258 DISP1Q96F81 1524 aa19.97■□□□□ 0.79
CLN8-207ENST00000524258 KIF21BO75037 1637 aa19.91■□□□□ 0.78
CLN8-207ENST00000524258 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
CLN8-207ENST00000524258 CTTNBP2Q8WZ74 1663 aa19.89■□□□□ 0.77
CLN8-207ENST00000524258 TNIKQ9UKE5 1360 aa19.88■□□□□ 0.77
CLN8-207ENST00000524258 PTPRGP23470 1445 aa19.86■□□□□ 0.77
CLN8-207ENST00000524258 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
CLN8-207ENST00000524258 ADCY10Q96PN6 1610 aa19.79■□□□□ 0.76
CLN8-207ENST00000524258 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
CLN8-207ENST00000524258 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
CLN8-207ENST00000524258 SAMD9Q5K651 1589 aa19.74■□□□□ 0.75
CLN8-207ENST00000524258 UACAQ9BZF9 1416 aa19.74■□□□□ 0.75
CLN8-207ENST00000524258 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
CLN8-207ENST00000524258 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
CLN8-207ENST00000524258 UBTFP17480 764 aaKnown RBP19.7■□□□□ 0.74
CLN8-207ENST00000524258 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
CLN8-207ENST00000524258 ABCC2Q92887 1545 aa19.69■□□□□ 0.74
CLN8-207ENST00000524258 PLB1Q6P1J6 1458 aa19.68■□□□□ 0.74
CLN8-207ENST00000524258 MAPKBP1O60336 1514 aa19.66■□□□□ 0.74
CLN8-207ENST00000524258 ABCA8O94911 1581 aa19.66■□□□□ 0.74
CLN8-207ENST00000524258 KDM5BQ9UGL1 1544 aa19.66■□□□□ 0.74
CLN8-207ENST00000524258 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
CLN8-207ENST00000524258 NPM1P06748 294 aaKnown RBP eCLIP19.64■□□□□ 0.73
CLN8-207ENST00000524258 FHOD3Q2V2M9 1422 aa19.63■□□□□ 0.73
CLN8-207ENST00000524258 RANGAP1P46060 587 aaPredicted RBP19.63■□□□□ 0.73
CLN8-207ENST00000524258 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
CLN8-207ENST00000524258 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
CLN8-207ENST00000524258 ABCC10Q5T3U5 1492 aa19.59■□□□□ 0.73
CLN8-207ENST00000524258 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
CLN8-207ENST00000524258 ZCCHC11Q5TAX3 1644 aaKnown RBP19.54■□□□□ 0.72
CLN8-207ENST00000524258 ATP10BO94823 1461 aa19.54■□□□□ 0.72
CLN8-207ENST00000524258 KIF13AQ9H1H9 1805 aa19.52■□□□□ 0.72
CLN8-207ENST00000524258 DIP2BQ9P265 1576 aa19.52■□□□□ 0.71
CLN8-207ENST00000524258 FAM69CQ0P6D2 419 aa19.51■□□□□ 0.71
CLN8-207ENST00000524258 NUP153P49790 1475 aaKnown RBP19.51■□□□□ 0.71
CLN8-207ENST00000524258 RAPGEF6Q8TEU7 1601 aa19.5■□□□□ 0.71
CLN8-207ENST00000524258 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
CLN8-207ENST00000524258 EPRSP07814 1512 aaKnown RBP19.46■□□□□ 0.71
CLN8-207ENST00000524258 WDR7Q9Y4E6 1490 aa19.45■□□□□ 0.7
CLN8-207ENST00000524258 GLI2P10070 1586 aa19.44■□□□□ 0.7
CLN8-207ENST00000524258 CLIP1P30622 1438 aa19.44■□□□□ 0.7
CLN8-207ENST00000524258 FMN1Q68DA7 1419 aa19.44■□□□□ 0.7
CLN8-207ENST00000524258 ARID3CA6NKF2 412 aa19.44■□□□□ 0.7
CLN8-207ENST00000524258 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
CLN8-207ENST00000524258 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
CLN8-207ENST00000524258 KCNH8Q96L42 1107 aa19.34■□□□□ 0.69
CLN8-207ENST00000524258 CDK13Q14004 1512 aaKnown RBP19.34■□□□□ 0.69
CLN8-207ENST00000524258 PPRC1Q5VV67 1664 aaKnown RBP19.33■□□□□ 0.68
CLN8-207ENST00000524258 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.68
CLN8-207ENST00000524258 HECW1Q76N89 1606 aa19.3■□□□□ 0.68
CLN8-207ENST00000524258 PLEKHD1A6NEE1 506 aa19.29■□□□□ 0.68
CLN8-207ENST00000524258 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
CLN8-207ENST00000524258 HNRNPUL2Q1KMD3 747 aaKnown RBP19.29■□□□□ 0.68
CLN8-207ENST00000524258 PCF11O94913 1555 aaKnown RBP19.28■□□□□ 0.68
CLN8-207ENST00000524258 CD109Q6YHK3 1445 aa19.27■□□□□ 0.68
CLN8-207ENST00000524258 MAGI3Q5TCQ9 1506 aa19.26■□□□□ 0.67
CLN8-207ENST00000524258 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
CLN8-207ENST00000524258 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
CLN8-207ENST00000524258 FYCO1Q9BQS8 1478 aa19.26■□□□□ 0.67
CLN8-207ENST00000524258 TSPOAP1O95153 1857 aa19.25■□□□□ 0.67
CLN8-207ENST00000524258 ABCA9Q8IUA7 1624 aa19.25■□□□□ 0.67
CLN8-207ENST00000524258 CFAP43Q8NDM7 1665 aa19.24■□□□□ 0.67
CLN8-207ENST00000524258 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
CLN8-207ENST00000524258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.665e-6■□□□□ 9.5
CLN8-207ENST00000524258 TROQ12816 1431 aaPredicted RBP19.19■□□□□ 0.66
CLN8-207ENST00000524258 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
CLN8-207ENST00000524258 TEX14Q8IWB6 1497 aa19.19■□□□□ 0.66
CLN8-207ENST00000524258 CDK11AQ9UQ88 783 aaPredicted RBP19.18■□□□□ 0.66
CLN8-207ENST00000524258 TTC37Q6PGP7 1564 aa19.15■□□□□ 0.66
CLN8-207ENST00000524258 VPS8Q8N3P4 1428 aa19.14■□□□□ 0.65
CLN8-207ENST00000524258 KDM6BO15054 1643 aa19.14■□□□□ 0.65
CLN8-207ENST00000524258 KIF14Q15058 1648 aa19.12■□□□□ 0.65
CLN8-207ENST00000524258 PLCH2O75038 1416 aa19.1■□□□□ 0.65
CLN8-207ENST00000524258 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
CLN8-207ENST00000524258 NEO1Q92859 1461 aa19.09■□□□□ 0.65
CLN8-207ENST00000524258 PHLDB1Q86UU1 1377 aa19.09■□□□□ 0.65
CLN8-207ENST00000524258 FANCAO15360 1455 aa19.04■□□□□ 0.64
CLN8-207ENST00000524258 AKNAQ7Z591 1439 aa19.03■□□□□ 0.64
CLN8-207ENST00000524258 RAPGEF3O95398 923 aa19■□□□□ 0.63
CLN8-207ENST00000524258 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
CLN8-207ENST00000524258 TIAM1Q13009 1591 aa19■□□□□ 0.63
CLN8-207ENST00000524258 MAP3K1Q13233 1512 aa19■□□□□ 0.63
CLN8-207ENST00000524258 EFCAB2Q5VUJ9 269 aa18.99■□□□□ 0.63
CLN8-207ENST00000524258 GPATCH8Q9UKJ3 1502 aaKnown RBP18.98■□□□□ 0.63
CLN8-207ENST00000524258 FRMPD1Q5SYB0 1578 aa18.98■□□□□ 0.63
CLN8-207ENST00000524258 KANK4Q5T7N3 995 aaPredicted RBP18.97■□□□□ 0.63
CLN8-207ENST00000524258 MYO5CQ9NQX4 1742 aa18.97■□□□□ 0.63
CLN8-207ENST00000524258 EHBP1L1Q8N3D4 1523 aa18.96■□□□□ 0.63
CLN8-207ENST00000524258 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms