RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 RUSC2Q8N2Y8 1516 aa32.83■■■□□ 2.85
PTP4A3-206ENST00000524028 KIAA0586Q9BVV6 1533 aa32.71■■■□□ 2.83
PTP4A3-206ENST00000524028 CUL7Q14999 1698 aa32.7■■■□□ 2.83
PTP4A3-206ENST00000524028 CARMIL1Q5VZK9 1371 aa32.64■■■□□ 2.82
PTP4A3-206ENST00000524028 ADCY10Q96PN6 1610 aa32.49■■■□□ 2.79
PTP4A3-206ENST00000524028 NPM1P06748 294 aaKnown RBP eCLIP32.49■■■□□ 2.79
PTP4A3-206ENST00000524028 KIF13AQ9H1H9 1805 aa32.47■■■□□ 2.79
PTP4A3-206ENST00000524028 MAPKBP1O60336 1514 aa32.42■■■□□ 2.78
PTP4A3-206ENST00000524028 FAM69CQ0P6D2 419 aa32.42■■■□□ 2.78
PTP4A3-206ENST00000524028 ABCC10Q5T3U5 1492 aa32.42■■■□□ 2.78
PTP4A3-206ENST00000524028 PTPRGP23470 1445 aa32.4■■■□□ 2.78
PTP4A3-206ENST00000524028 TTBK1Q5TCY1 1321 aaPredicted RBP32.37■■■□□ 2.77
PTP4A3-206ENST00000524028 IQGAP2Q13576 1575 aa32.36■■■□□ 2.77
PTP4A3-206ENST00000524028 CARMIL2Q6F5E8 1435 aa32.34■■■□□ 2.77
PTP4A3-206ENST00000524028 TNIKQ9UKE5 1360 aa32.34■■■□□ 2.77
PTP4A3-206ENST00000524028 RAPGEF2Q9Y4G8 1499 aa32.34■■■□□ 2.77
PTP4A3-206ENST00000524028 DIP2BQ9P265 1576 aa32.31■■■□□ 2.76
PTP4A3-206ENST00000524028 DISP1Q96F81 1524 aa32.27■■■□□ 2.76
PTP4A3-206ENST00000524028 AEBP2Q6ZN18 517 aaPredicted RBP32.23■■■□□ 2.75
PTP4A3-206ENST00000524028 ABCC2Q92887 1545 aa32.21■■■□□ 2.75
PTP4A3-206ENST00000524028 UGGT2Q9NYU1 1516 aa32.19■■■□□ 2.74
PTP4A3-206ENST00000524028 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
PTP4A3-206ENST00000524028 UACAQ9BZF9 1416 aa32.15■■■□□ 2.74
PTP4A3-206ENST00000524028 ASXL2Q76L83 1435 aa32.1■■■□□ 2.73
PTP4A3-206ENST00000524028 KIAA0556O60303 1618 aa32.08■■■□□ 2.73
PTP4A3-206ENST00000524028 PLB1Q6P1J6 1458 aa32.05■■■□□ 2.72
PTP4A3-206ENST00000524028 PRXQ9BXM0 1461 aa32.05■■■□□ 2.72
PTP4A3-206ENST00000524028 TSPOAP1O95153 1857 aa32.02■■■□□ 2.72
PTP4A3-206ENST00000524028 KDM5BQ9UGL1 1544 aa32.01■■■□□ 2.72
PTP4A3-206ENST00000524028 KDM6BO15054 1643 aa31.98■■■□□ 2.71
PTP4A3-206ENST00000524028 CTTNBP2Q8WZ74 1663 aa31.97■■■□□ 2.71
PTP4A3-206ENST00000524028 GLI2P10070 1586 aa31.97■■■□□ 2.71
PTP4A3-206ENST00000524028 ZCCHC11Q5TAX3 1644 aaKnown RBP31.91■■■□□ 2.7
PTP4A3-206ENST00000524028 GOLGA3Q08378 1498 aa31.91■■■□□ 2.7
PTP4A3-206ENST00000524028 EPRSP07814 1512 aaKnown RBP31.9■■■□□ 2.7
PTP4A3-206ENST00000524028 PPRC1Q5VV67 1664 aaKnown RBP31.88■■■□□ 2.69
PTP4A3-206ENST00000524028 CSRNP3Q8WYN3 585 aa31.83■■■□□ 2.69
PTP4A3-206ENST00000524028 ABCA8O94911 1581 aa31.81■■■□□ 2.68
PTP4A3-206ENST00000524028 MAP3K4Q9Y6R4 1608 aa31.78■■■□□ 2.68
PTP4A3-206ENST00000524028 WDR7Q9Y4E6 1490 aa31.78■■■□□ 2.68
PTP4A3-206ENST00000524028 KDM4FA0A1W2PPD8 638 aa31.75■■■□□ 2.67
PTP4A3-206ENST00000524028 COL17A1Q9UMD9 1497 aaPredicted RBP31.75■■■□□ 2.67
PTP4A3-206ENST00000524028 P3H3Q8IVL6 736 aa31.74■■■□□ 2.67
PTP4A3-206ENST00000524028 TEX14Q8IWB6 1497 aa31.68■■■□□ 2.66
PTP4A3-206ENST00000524028 KCNH8Q96L42 1107 aa31.67■■■□□ 2.66
PTP4A3-206ENST00000524028 EEA1Q15075 1411 aa31.63■■■□□ 2.65
PTP4A3-206ENST00000524028 ARID3CA6NKF2 412 aa31.62■■■□□ 2.65
PTP4A3-206ENST00000524028 SAMD9Q5K651 1589 aa31.6■■■□□ 2.65
PTP4A3-206ENST00000524028 CD109Q6YHK3 1445 aa31.59■■■□□ 2.65
PTP4A3-206ENST00000524028 FAM9AQ8IZU1 332 aaPredicted RBP31.59■■■□□ 2.65
PTP4A3-206ENST00000524028 ATP10BO94823 1461 aa31.59■■■□□ 2.65
PTP4A3-206ENST00000524028 MAGI3Q5TCQ9 1506 aa31.55■■■□□ 2.64
PTP4A3-206ENST00000524028 RANGAP1P46060 587 aaPredicted RBP31.52■■■□□ 2.64
PTP4A3-206ENST00000524028 CFAP43Q8NDM7 1665 aa31.51■■■□□ 2.64
PTP4A3-206ENST00000524028 RAPGEF6Q8TEU7 1601 aa31.45■■■□□ 2.62
PTP4A3-206ENST00000524028 ADGRL1O94910 1474 aa31.45■■■□□ 2.62
PTP4A3-206ENST00000524028 FHOD3Q2V2M9 1422 aa31.43■■■□□ 2.62
PTP4A3-206ENST00000524028 NUP153P49790 1475 aaKnown RBP31.39■■■□□ 2.62
PTP4A3-206ENST00000524028 KIF21BO75037 1637 aa31.38■■■□□ 2.61
PTP4A3-206ENST00000524028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.37■■■□□ 2.61
PTP4A3-206ENST00000524028 HNRNPUL2Q1KMD3 747 aaKnown RBP31.37■■■□□ 2.61
PTP4A3-206ENST00000524028 CHIC1Q5VXU3 224 aa31.34■■■□□ 2.61
PTP4A3-206ENST00000524028 ABCA9Q8IUA7 1624 aa31.34■■■□□ 2.61
PTP4A3-206ENST00000524028 ARAP3Q8WWN8 1544 aa31.31■■■□□ 2.6
PTP4A3-206ENST00000524028 EHMT2Q96KQ7 1210 aa31.27■■■□□ 2.6
PTP4A3-206ENST00000524028 EFCAB5A4FU69 1503 aa31.26■■■□□ 2.59
PTP4A3-206ENST00000524028 PHLDB1Q86UU1 1377 aa31.22■■■□□ 2.59
PTP4A3-206ENST00000524028 PLEKHD1A6NEE1 506 aa31.2■■■□□ 2.59
PTP4A3-206ENST00000524028 UBTFP17480 764 aaKnown RBP31.2■■■□□ 2.59
PTP4A3-206ENST00000524028 RAPGEF3O95398 923 aa31.18■■■□□ 2.58
PTP4A3-206ENST00000524028 NEO1Q92859 1461 aa31.18■■■□□ 2.58
PTP4A3-206ENST00000524028 CDK13Q14004 1512 aaKnown RBP31.08■■■□□ 2.57
PTP4A3-206ENST00000524028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.08■■■□□ 2.576e-7■■■□□ 18.2
PTP4A3-206ENST00000524028 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
PTP4A3-206ENST00000524028 FRMPD1Q5SYB0 1578 aa31.05■■■□□ 2.56
PTP4A3-206ENST00000524028 TTC37Q6PGP7 1564 aa31.01■■■□□ 2.56
PTP4A3-206ENST00000524028 FMN1Q68DA7 1419 aa31.01■■■□□ 2.55
PTP4A3-206ENST00000524028 AKNAQ7Z591 1439 aa31.01■■■□□ 2.55
PTP4A3-206ENST00000524028 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
PTP4A3-206ENST00000524028 FANCAO15360 1455 aa31■■■□□ 2.55
PTP4A3-206ENST00000524028 HECW2Q9P2P5 1572 aa30.98■■■□□ 2.55
PTP4A3-206ENST00000524028 DENND4BO75064 1496 aaPredicted RBP30.97■■■□□ 2.55
PTP4A3-206ENST00000524028 HECW1Q76N89 1606 aa30.93■■■□□ 2.54
PTP4A3-206ENST00000524028 CFAP74Q9C0B2 1584 aa30.9■■■□□ 2.54
PTP4A3-206ENST00000524028 RICTORQ6R327 1708 aa30.9■■■□□ 2.54
PTP4A3-206ENST00000524028 PLCH2O75038 1416 aa30.9■■■□□ 2.54
PTP4A3-206ENST00000524028 ADAMTSL3P82987 1691 aa30.89■■■□□ 2.54
PTP4A3-206ENST00000524028 ARID4BQ4LE39 1312 aaPredicted RBP30.87■■■□□ 2.53
PTP4A3-206ENST00000524028 ARHGEF40Q8TER5 1519 aa30.85■■■□□ 2.53
PTP4A3-206ENST00000524028 PTPRMP28827 1452 aa30.85■■■□□ 2.53
PTP4A3-206ENST00000524028 CDK11AQ9UQ88 783 aaPredicted RBP30.84■■■□□ 2.53
PTP4A3-206ENST00000524028 BCORL1Q5H9F3 1711 aa30.81■■■□□ 2.52
PTP4A3-206ENST00000524028 ZMYM4Q5VZL5 1548 aa30.81■■■□□ 2.52
PTP4A3-206ENST00000524028 SCAPERQ9BY12 1400 aa30.81■■■□□ 2.52
PTP4A3-206ENST00000524028 YEATS2Q9ULM3 1422 aa30.8■■■□□ 2.52
PTP4A3-206ENST00000524028 TROQ12816 1431 aaPredicted RBP30.79■■■□□ 2.52
PTP4A3-206ENST00000524028 KIF14Q15058 1648 aa30.78■■■□□ 2.52
PTP4A3-206ENST00000524028 LRRIQ1Q96JM4 1722 aa30.76■■■□□ 2.52
PTP4A3-206ENST00000524028 POGZQ7Z3K3 1410 aa30.76■■■□□ 2.51
PTP4A3-206ENST00000524028 EFCAB2Q5VUJ9 269 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms