RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
CTNNA1-240ENST00000523912 IGF1RP08069 1367 aa15.29■□□□□ 0.04
CTNNA1-240ENST00000523912 CUL7Q14999 1698 aa15.28■□□□□ 0.04
CTNNA1-240ENST00000523912 RUSC2Q8N2Y8 1516 aa15.28■□□□□ 0.04
CTNNA1-240ENST00000523912 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
CTNNA1-240ENST00000523912 MAPKBP1O60336 1514 aa15.27■□□□□ 0.04
CTNNA1-240ENST00000523912 ABCC10Q5T3U5 1492 aa15.27■□□□□ 0.04
CTNNA1-240ENST00000523912 KIAA0586Q9BVV6 1533 aa15.25■□□□□ 0.03
CTNNA1-240ENST00000523912 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
CTNNA1-240ENST00000523912 CARMIL1Q5VZK9 1371 aa15.23■□□□□ 0.03
CTNNA1-240ENST00000523912 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
CTNNA1-240ENST00000523912 ADCY10Q96PN6 1610 aa15.18■□□□□ 0.02
CTNNA1-240ENST00000523912 CARMIL2Q6F5E8 1435 aa15.14■□□□□ 0.01
CTNNA1-240ENST00000523912 PTPRGP23470 1445 aa15.12■□□□□ 0.01
CTNNA1-240ENST00000523912 RAPGEF2Q9Y4G8 1499 aa15.11■□□□□ 0.01
CTNNA1-240ENST00000523912 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
CTNNA1-240ENST00000523912 KDM6BO15054 1643 aa15.1■□□□□ 0.01
CTNNA1-240ENST00000523912 TNIKQ9UKE5 1360 aa15.1■□□□□ 0.01
CTNNA1-240ENST00000523912 ABCC2Q92887 1545 aa15.07■□□□□ 0
CTNNA1-240ENST00000523912 UHRF1BP1LA0JNW5 1464 aa15.07■□□□□ 0
CTNNA1-240ENST00000523912 PLB1Q6P1J6 1458 aa15.06■□□□□ 0
CTNNA1-240ENST00000523912 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
CTNNA1-240ENST00000523912 GLI2P10070 1586 aa15.05■□□□□ -0
CTNNA1-240ENST00000523912 KDM4FA0A1W2PPD8 638 aa15.04■□□□□ -0
CTNNA1-240ENST00000523912 ASXL2Q76L83 1435 aa15.01□□□□□ -0.01
CTNNA1-240ENST00000523912 UGGT2Q9NYU1 1516 aa15.01□□□□□ -0.01
CTNNA1-240ENST00000523912 UACAQ9BZF9 1416 aa15□□□□□ -0.01
CTNNA1-240ENST00000523912 TSPOAP1O95153 1857 aa15□□□□□ -0.01
CTNNA1-240ENST00000523912 DISP1Q96F81 1524 aa14.99□□□□□ -0.01
CTNNA1-240ENST00000523912 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
CTNNA1-240ENST00000523912 GOLGA3Q08378 1498 aa14.96□□□□□ -0.01
CTNNA1-240ENST00000523912 KIAA0556O60303 1618 aa14.95□□□□□ -0.02
CTNNA1-240ENST00000523912 PRXQ9BXM0 1461 aa14.95□□□□□ -0.02
CTNNA1-240ENST00000523912 PPRC1Q5VV67 1664 aaKnown RBP14.94□□□□□ -0.02
CTNNA1-240ENST00000523912 TEX14Q8IWB6 1497 aa14.94□□□□□ -0.02
CTNNA1-240ENST00000523912 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
CTNNA1-240ENST00000523912 FAM9AQ8IZU1 332 aaPredicted RBP14.92□□□□□ -0.02
CTNNA1-240ENST00000523912 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
CTNNA1-240ENST00000523912 MAP3K4Q9Y6R4 1608 aa14.9□□□□□ -0.02
CTNNA1-240ENST00000523912 EEA1Q15075 1411 aa14.9□□□□□ -0.02
CTNNA1-240ENST00000523912 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
CTNNA1-240ENST00000523912 COL17A1Q9UMD9 1497 aaPredicted RBP14.88□□□□□ -0.03
CTNNA1-240ENST00000523912 ZCCHC11Q5TAX3 1644 aaKnown RBP14.86□□□□□ -0.03
CTNNA1-240ENST00000523912 ADGRL1O94910 1474 aa14.86□□□□□ -0.03
CTNNA1-240ENST00000523912 WDR7Q9Y4E6 1490 aa14.85□□□□□ -0.03
CTNNA1-240ENST00000523912 MAGI3Q5TCQ9 1506 aa14.82□□□□□ -0.04
CTNNA1-240ENST00000523912 ABCA8O94911 1581 aa14.8□□□□□ -0.04
CTNNA1-240ENST00000523912 CD109Q6YHK3 1445 aa14.78□□□□□ -0.04
CTNNA1-240ENST00000523912 CFAP43Q8NDM7 1665 aa14.77□□□□□ -0.04
CTNNA1-240ENST00000523912 ILDR1Q86SU0 546 aaPredicted RBP14.75□□□□□ -0.05
CTNNA1-240ENST00000523912 P3H3Q8IVL6 736 aa14.75□□□□□ -0.05
CTNNA1-240ENST00000523912 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
CTNNA1-240ENST00000523912 SAMD9Q5K651 1589 aa14.73□□□□□ -0.05
CTNNA1-240ENST00000523912 KCNH8Q96L42 1107 aa14.72□□□□□ -0.05
CTNNA1-240ENST00000523912 ARAP3Q8WWN8 1544 aa14.71□□□□□ -0.05
CTNNA1-240ENST00000523912 HECW2Q9P2P5 1572 aa14.71□□□□□ -0.05
CTNNA1-240ENST00000523912 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
CTNNA1-240ENST00000523912 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
CTNNA1-240ENST00000523912 KIF21BO75037 1637 aa14.7□□□□□ -0.06
CTNNA1-240ENST00000523912 EFCAB5A4FU69 1503 aa14.67□□□□□ -0.06
CTNNA1-240ENST00000523912 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
CTNNA1-240ENST00000523912 HNRNPUL2Q1KMD3 747 aaKnown RBP14.67□□□□□ -0.06
CTNNA1-240ENST00000523912 ATP10BO94823 1461 aa14.67□□□□□ -0.06
CTNNA1-240ENST00000523912 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
CTNNA1-240ENST00000523912 RAPGEF6Q8TEU7 1601 aa14.66□□□□□ -0.06
CTNNA1-240ENST00000523912 CHIC1Q5VXU3 224 aa14.65□□□□□ -0.06
CTNNA1-240ENST00000523912 UBTFP17480 764 aaKnown RBP14.63□□□□□ -0.07
CTNNA1-240ENST00000523912 ABCA9Q8IUA7 1624 aa14.63□□□□□ -0.07
CTNNA1-240ENST00000523912 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
CTNNA1-240ENST00000523912 NEO1Q92859 1461 aa14.62□□□□□ -0.07
CTNNA1-240ENST00000523912 PLEKHD1A6NEE1 506 aa14.58□□□□□ -0.08
CTNNA1-240ENST00000523912 EHMT2Q96KQ7 1210 aa14.57□□□□□ -0.08
CTNNA1-240ENST00000523912 ADAMTSL3P82987 1691 aa14.56□□□□□ -0.08
CTNNA1-240ENST00000523912 FMN1Q68DA7 1419 aa14.56□□□□□ -0.08
CTNNA1-240ENST00000523912 PTPRMP28827 1452 aa14.55□□□□□ -0.08
CTNNA1-240ENST00000523912 RAPGEF3O95398 923 aa14.53□□□□□ -0.08
CTNNA1-240ENST00000523912 FBXO41Q8TF61 875 aa14.51□□□□□ -0.09
CTNNA1-240ENST00000523912 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
CTNNA1-240ENST00000523912 BCORL1Q5H9F3 1711 aa14.49□□□□□ -0.09
CTNNA1-240ENST00000523912 HECW1Q76N89 1606 aa14.49□□□□□ -0.09
CTNNA1-240ENST00000523912 FRMPD1Q5SYB0 1578 aa14.49□□□□□ -0.09
CTNNA1-240ENST00000523912 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
CTNNA1-240ENST00000523912 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
CTNNA1-240ENST00000523912 DENND4BO75064 1496 aaPredicted RBP14.48□□□□□ -0.09
CTNNA1-240ENST00000523912 CDK13Q14004 1512 aaKnown RBP14.47□□□□□ -0.09
CTNNA1-240ENST00000523912 CFAP74Q9C0B2 1584 aa14.47□□□□□ -0.09
CTNNA1-240ENST00000523912 AKNAQ7Z591 1439 aa14.46□□□□□ -0.09
CTNNA1-240ENST00000523912 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.1
CTNNA1-240ENST00000523912 FANCAO15360 1455 aa14.45□□□□□ -0.1
CTNNA1-240ENST00000523912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.45□□□□□ -0.16e-6■■■■■ 38.2
CTNNA1-240ENST00000523912 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
CTNNA1-240ENST00000523912 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
CTNNA1-240ENST00000523912 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
CTNNA1-240ENST00000523912 POGZQ7Z3K3 1410 aa14.44□□□□□ -0.1
CTNNA1-240ENST00000523912 CLIP1P30622 1438 aa14.43□□□□□ -0.1
CTNNA1-240ENST00000523912 ZMYM4Q5VZL5 1548 aa14.43□□□□□ -0.1
CTNNA1-240ENST00000523912 MADDQ8WXG6 1647 aa14.43□□□□□ -0.1
CTNNA1-240ENST00000523912 RICTORQ6R327 1708 aa14.43□□□□□ -0.1
CTNNA1-240ENST00000523912 TTC37Q6PGP7 1564 aa14.43□□□□□ -0.1
CTNNA1-240ENST00000523912 LMTK3Q96Q04 1460 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms