RNA–Protein interactions for RNA: ENST00000523564.2

TPD52-225, Transcript of tumor protein D52, humanhuman

TSL 5

Gene TPD52, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPD52-225ENST00000523564 SMARCA4P51532 1647 aa9.16□□□□□ -0.94
TPD52-225ENST00000523564 ZNF579Q8NAF0 562 aaKnown RBP9.14□□□□□ -0.95
TPD52-225ENST00000523564 SUPT5HO00267 1087 aaKnown RBP9.12□□□□□ -0.95
TPD52-225ENST00000523564 FOXD4L1Q9NU39 408 aa9.12□□□□□ -0.95
TPD52-225ENST00000523564 WIZO95785 1651 aa9.11□□□□□ -0.95
TPD52-225ENST00000523564 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
TPD52-225ENST00000523564 PEG3Q9GZU2 1588 aa9.11□□□□□ -0.95
TPD52-225ENST00000523564 ATAD2BQ9ULI0 1458 aa9.1□□□□□ -0.95
TPD52-225ENST00000523564 NCAPD3P42695 1498 aa9.09□□□□□ -0.95
TPD52-225ENST00000523564 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
TPD52-225ENST00000523564 ZRANB1Q9UGI0 708 aa9.09□□□□□ -0.95
TPD52-225ENST00000523564 FAM163AQ96GL9 167 aaPredicted RBP9.06□□□□□ -0.96
TPD52-225ENST00000523564 SMARCA2P51531 1590 aa9.02□□□□□ -0.97
TPD52-225ENST00000523564 MKRN4PQ13434 485 aaPredicted RBP9.01□□□□□ -0.97
TPD52-225ENST00000523564 MAMSTRQ6ZN01 415 aa8.98□□□□□ -0.97
TPD52-225ENST00000523564 PELP1Q8IZL8 1130 aaKnown RBP8.98□□□□□ -0.97
TPD52-225ENST00000523564 POTEJP0CG39 1038 aa8.97□□□□□ -0.97
TPD52-225ENST00000523564 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
TPD52-225ENST00000523564 TOP2AP11388 1531 aaKnown RBP8.96□□□□□ -0.97
TPD52-225ENST00000523564 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
TPD52-225ENST00000523564 CCDC88BA6NC98 1476 aa8.96□□□□□ -0.98
TPD52-225ENST00000523564 BAZ1BQ9UIG0 1483 aaKnown RBP8.96□□□□□ -0.98
TPD52-225ENST00000523564 CDAN1Q8IWY9 1227 aa8.95□□□□□ -0.98
TPD52-225ENST00000523564 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
TPD52-225ENST00000523564 PHF12Q96QT6 1004 aa8.9□□□□□ -0.98
TPD52-225ENST00000523564 SLC39A7Q92504 469 aa8.89□□□□□ -0.99
TPD52-225ENST00000523564 ATXN8OSP0DMR3 200 aa8.88□□□□□ -0.99
TPD52-225ENST00000523564 C7P10643 843 aa8.87□□□□□ -0.99
TPD52-225ENST00000523564 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
TPD52-225ENST00000523564 ASTLQ6HA08 431 aaPredicted RBP8.84□□□□□ -0.99
TPD52-225ENST00000523564 MMRN1Q13201 1228 aa8.82□□□□□ -1
TPD52-225ENST00000523564 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
TPD52-225ENST00000523564 SLC4A1APQ9BWU0 796 aaKnown RBP8.81□□□□□ -1
TPD52-225ENST00000523564 CFTRP13569 1480 aa8.81□□□□□ -1
TPD52-225ENST00000523564 ATMINO43313 823 aaPredicted RBP8.8□□□□□ -1
TPD52-225ENST00000523564 ERCC6Q03468 1493 aa8.78□□□□□ -1
TPD52-225ENST00000523564 CREBZFQ9NS37 354 aa8.78□□□□□ -1
TPD52-225ENST00000523564 NESP48681 1621 aa8.78□□□□□ -1
TPD52-225ENST00000523564 MS4A3Q96HJ5 214 aa8.75□□□□□ -1.01
TPD52-225ENST00000523564 SPNS2Q8IVW8 549 aa8.74□□□□□ -1.01
TPD52-225ENST00000523564 LAMC3Q9Y6N6 1575 aa8.73□□□□□ -1.01
TPD52-225ENST00000523564 PDS5BQ9NTI5 1447 aa8.71□□□□□ -1.02
TPD52-225ENST00000523564 CUX2O14529 1486 aa8.7□□□□□ -1.02
TPD52-225ENST00000523564 ZBTB22O15209 634 aa8.7□□□□□ -1.02
TPD52-225ENST00000523564 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
TPD52-225ENST00000523564 FANCD2Q9BXW9 1451 aa8.66□□□□□ -1.02
TPD52-225ENST00000523564 POTEFA5A3E0 1075 aa8.66□□□□□ -1.02
TPD52-225ENST00000523564 ST18O60284 1047 aa8.65□□□□□ -1.02
TPD52-225ENST00000523564 PRDM2Q13029 1718 aa8.65□□□□□ -1.03
TPD52-225ENST00000523564 ABCC8Q09428 1581 aa8.64□□□□□ -1.03
TPD52-225ENST00000523564 THOC2Q8NI27 1593 aaKnown RBP8.64□□□□□ -1.03
TPD52-225ENST00000523564 NPM1P06748 294 aaKnown RBP eCLIP8.62□□□□□ -1.03
TPD52-225ENST00000523564 KIF21AQ7Z4S6 1674 aa8.62□□□□□ -1.03
TPD52-225ENST00000523564 MRC2Q9UBG0 1479 aa8.61□□□□□ -1.03
TPD52-225ENST00000523564 WRNQ14191 1432 aaPredicted RBP eCLIP8.61□□□□□ -1.03
TPD52-225ENST00000523564 CEP164Q9UPV0 1460 aa8.6□□□□□ -1.03
TPD52-225ENST00000523564 CUX1P39880 1505 aa8.59□□□□□ -1.03
TPD52-225ENST00000523564 URB2Q14146 1524 aaKnown RBP8.59□□□□□ -1.03
TPD52-225ENST00000523564 TRIM41Q8WV44 630 aa8.59□□□□□ -1.03
TPD52-225ENST00000523564 SYNJ1O43426 1573 aa8.58□□□□□ -1.04
TPD52-225ENST00000523564 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
TPD52-225ENST00000523564 WDR62O43379 1518 aa8.58□□□□□ -1.04
TPD52-225ENST00000523564 TOPBP1Q92547 1522 aa8.57□□□□□ -1.04
TPD52-225ENST00000523564 TOP2BQ02880 1626 aa8.56□□□□□ -1.04
TPD52-225ENST00000523564 BIVM-ERCC5R4GMW8 1640 aa8.55□□□□□ -1.04
TPD52-225ENST00000523564 DNAJC5Q9H3Z4 198 aa8.55□□□□□ -1.04
TPD52-225ENST00000523564 SEC24BO95487 1268 aa8.54□□□□□ -1.04
TPD52-225ENST00000523564 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
TPD52-225ENST00000523564 BMP2KQ9NSY1 1161 aaPredicted RBP8.54□□□□□ -1.04
TPD52-225ENST00000523564 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
TPD52-225ENST00000523564 COLQQ9Y215 455 aaPredicted RBP8.53□□□□□ -1.04
TPD52-225ENST00000523564 RUSC2Q8N2Y8 1516 aa8.52□□□□□ -1.05
TPD52-225ENST00000523564 SOGA1O94964 1423 aa8.52□□□□□ -1.05
TPD52-225ENST00000523564 POLA1P09884 1462 aaPredicted RBP8.51□□□□□ -1.05
TPD52-225ENST00000523564 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
TPD52-225ENST00000523564 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
TPD52-225ENST00000523564 MNX1P50219 401 aaPredicted RBP8.5□□□□□ -1.05
TPD52-225ENST00000523564 TMEM121BQ9BXQ6 578 aaPredicted RBP8.48□□□□□ -1.05
TPD52-225ENST00000523564 TARBP1Q13395 1621 aaKnown RBP8.47□□□□□ -1.05
TPD52-225ENST00000523564 TRPC6Q9Y210 931 aa8.47□□□□□ -1.05
TPD52-225ENST00000523564 TSPYL2Q9H2G4 693 aaPredicted RBP8.46□□□□□ -1.06
TPD52-225ENST00000523564 ABCA10Q8WWZ4 1543 aa8.45□□□□□ -1.06
TPD52-225ENST00000523564 MARVELD3Q96A59 401 aa8.45□□□□□ -1.06
TPD52-225ENST00000523564 IGF1RP08069 1367 aa8.45□□□□□ -1.06
TPD52-225ENST00000523564 TIE1P35590 1138 aa8.44□□□□□ -1.06
TPD52-225ENST00000523564 CSRNP3Q8WYN3 585 aa8.44□□□□□ -1.06
TPD52-225ENST00000523564 TDRD9Q8NDG6 1382 aaKnown RBP8.44□□□□□ -1.06
TPD52-225ENST00000523564 AQRO60306 1485 aaKnown RBP eCLIP8.43□□□□□ -1.06
TPD52-225ENST00000523564 IFT140Q96RY7 1462 aa8.43□□□□□ -1.06
TPD52-225ENST00000523564 ZNF608Q9ULD9 1512 aaPredicted RBP8.43□□□□□ -1.06
TPD52-225ENST00000523564 FAM9AQ8IZU1 332 aaPredicted RBP8.42□□□□□ -1.06
TPD52-225ENST00000523564 KIF12Q96FN5 646 aa8.42□□□□□ -1.06
TPD52-225ENST00000523564 CCDC61Q9Y6R9 512 aa8.42□□□□□ -1.06
TPD52-225ENST00000523564 WDR97A6NE52 1622 aa8.41□□□□□ -1.06
TPD52-225ENST00000523564 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
TPD52-225ENST00000523564 KIF27Q86VH2 1401 aa8.38□□□□□ -1.07
TPD52-225ENST00000523564 TTLL13PA6NNM8 815 aa8.38□□□□□ -1.07
TPD52-225ENST00000523564 ABCA5Q8WWZ7 1642 aa8.37□□□□□ -1.07
TPD52-225ENST00000523564 IER5LQ5T953 404 aa8.37□□□□□ -1.07
TPD52-225ENST00000523564 GAPVD1Q14C86 1478 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms