RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 KIF27Q86VH2 1401 aa20.46■□□□□ 0.87
CTNNA1-237ENST00000523275 PRG4Q92954 1404 aaPredicted RBP20.46■□□□□ 0.87
CTNNA1-237ENST00000523275 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
CTNNA1-237ENST00000523275 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
CTNNA1-237ENST00000523275 CUL7Q14999 1698 aa20.33■□□□□ 0.85
CTNNA1-237ENST00000523275 CARMIL1Q5VZK9 1371 aa20.33■□□□□ 0.84
CTNNA1-237ENST00000523275 NPM1P06748 294 aaKnown RBP eCLIP20.28■□□□□ 0.84
CTNNA1-237ENST00000523275 PTPRGP23470 1445 aa20.18■□□□□ 0.82
CTNNA1-237ENST00000523275 FAM69CQ0P6D2 419 aa20.17■□□□□ 0.82
CTNNA1-237ENST00000523275 CARMIL2Q6F5E8 1435 aa20.16■□□□□ 0.82
CTNNA1-237ENST00000523275 TTBK1Q5TCY1 1321 aaPredicted RBP20.15■□□□□ 0.82
CTNNA1-237ENST00000523275 ADCY10Q96PN6 1610 aa20.15■□□□□ 0.82
CTNNA1-237ENST00000523275 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
CTNNA1-237ENST00000523275 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
CTNNA1-237ENST00000523275 MAPKBP1O60336 1514 aa20.12■□□□□ 0.81
CTNNA1-237ENST00000523275 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
CTNNA1-237ENST00000523275 KIF13AQ9H1H9 1805 aa20.12■□□□□ 0.81
CTNNA1-237ENST00000523275 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
CTNNA1-237ENST00000523275 DISP1Q96F81 1524 aa20.03■□□□□ 0.8
CTNNA1-237ENST00000523275 DIP2BQ9P265 1576 aa20.03■□□□□ 0.8
CTNNA1-237ENST00000523275 ABCC2Q92887 1545 aa20.02■□□□□ 0.79
CTNNA1-237ENST00000523275 UGGT2Q9NYU1 1516 aa20.01■□□□□ 0.79
CTNNA1-237ENST00000523275 UACAQ9BZF9 1416 aa20■□□□□ 0.79
CTNNA1-237ENST00000523275 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
CTNNA1-237ENST00000523275 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
CTNNA1-237ENST00000523275 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
CTNNA1-237ENST00000523275 PRXQ9BXM0 1461 aa19.93■□□□□ 0.78
CTNNA1-237ENST00000523275 KIAA0556O60303 1618 aa19.91■□□□□ 0.78
CTNNA1-237ENST00000523275 KDM5BQ9UGL1 1544 aa19.9■□□□□ 0.78
CTNNA1-237ENST00000523275 GOLGA3Q08378 1498 aa19.88■□□□□ 0.77
CTNNA1-237ENST00000523275 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
CTNNA1-237ENST00000523275 TSPOAP1O95153 1857 aa19.87■□□□□ 0.77
CTNNA1-237ENST00000523275 CTTNBP2Q8WZ74 1663 aa19.86■□□□□ 0.77
CTNNA1-237ENST00000523275 GLI2P10070 1586 aa19.86■□□□□ 0.77
CTNNA1-237ENST00000523275 KDM6BO15054 1643 aa19.85■□□□□ 0.77
CTNNA1-237ENST00000523275 EPRSP07814 1512 aaKnown RBP19.81■□□□□ 0.76
CTNNA1-237ENST00000523275 FAM9AQ8IZU1 332 aaPredicted RBP19.8■□□□□ 0.76
CTNNA1-237ENST00000523275 ZCCHC11Q5TAX3 1644 aaKnown RBP19.8■□□□□ 0.76
CTNNA1-237ENST00000523275 P3H3Q8IVL6 736 aa19.76■□□□□ 0.75
CTNNA1-237ENST00000523275 ABCA8O94911 1581 aa19.75■□□□□ 0.75
CTNNA1-237ENST00000523275 WDR7Q9Y4E6 1490 aa19.75■□□□□ 0.75
CTNNA1-237ENST00000523275 EEA1Q15075 1411 aa19.74■□□□□ 0.75
CTNNA1-237ENST00000523275 PPRC1Q5VV67 1664 aaKnown RBP19.74■□□□□ 0.75
CTNNA1-237ENST00000523275 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
CTNNA1-237ENST00000523275 MAP3K4Q9Y6R4 1608 aa19.72■□□□□ 0.75
CTNNA1-237ENST00000523275 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
CTNNA1-237ENST00000523275 KDM4FA0A1W2PPD8 638 aa19.7■□□□□ 0.74
CTNNA1-237ENST00000523275 COL17A1Q9UMD9 1497 aaPredicted RBP19.68■□□□□ 0.74
CTNNA1-237ENST00000523275 ARID3CA6NKF2 412 aa19.66■□□□□ 0.74
CTNNA1-237ENST00000523275 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
CTNNA1-237ENST00000523275 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
CTNNA1-237ENST00000523275 ATP10BO94823 1461 aa19.63■□□□□ 0.73
CTNNA1-237ENST00000523275 SAMD9Q5K651 1589 aa19.62■□□□□ 0.73
CTNNA1-237ENST00000523275 MAGI3Q5TCQ9 1506 aa19.61■□□□□ 0.73
CTNNA1-237ENST00000523275 CFAP43Q8NDM7 1665 aa19.58■□□□□ 0.72
CTNNA1-237ENST00000523275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
CTNNA1-237ENST00000523275 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
CTNNA1-237ENST00000523275 FHOD3Q2V2M9 1422 aa19.54■□□□□ 0.72
CTNNA1-237ENST00000523275 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
CTNNA1-237ENST00000523275 KIF21BO75037 1637 aa19.52■□□□□ 0.72
CTNNA1-237ENST00000523275 ADGRL1O94910 1474 aa19.51■□□□□ 0.71
CTNNA1-237ENST00000523275 NUP153P49790 1475 aaKnown RBP19.5■□□□□ 0.71
CTNNA1-237ENST00000523275 UBTFP17480 764 aaKnown RBP19.49■□□□□ 0.71
CTNNA1-237ENST00000523275 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
CTNNA1-237ENST00000523275 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
CTNNA1-237ENST00000523275 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
CTNNA1-237ENST00000523275 EFCAB5A4FU69 1503 aa19.46■□□□□ 0.71
CTNNA1-237ENST00000523275 ARAP3Q8WWN8 1544 aa19.46■□□□□ 0.71
CTNNA1-237ENST00000523275 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
CTNNA1-237ENST00000523275 NEO1Q92859 1461 aa19.4■□□□□ 0.7
CTNNA1-237ENST00000523275 RAPGEF3O95398 923 aa19.39■□□□□ 0.69
CTNNA1-237ENST00000523275 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
CTNNA1-237ENST00000523275 FMN1Q68DA7 1419 aa19.34■□□□□ 0.69
CTNNA1-237ENST00000523275 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
CTNNA1-237ENST00000523275 CDK13Q14004 1512 aaKnown RBP19.3■□□□□ 0.68
CTNNA1-237ENST00000523275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.68
CTNNA1-237ENST00000523275 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
CTNNA1-237ENST00000523275 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
CTNNA1-237ENST00000523275 FANCAO15360 1455 aa19.28■□□□□ 0.68
CTNNA1-237ENST00000523275 DENND4BO75064 1496 aaPredicted RBP19.27■□□□□ 0.67
CTNNA1-237ENST00000523275 FRMPD1Q5SYB0 1578 aa19.24■□□□□ 0.67
CTNNA1-237ENST00000523275 HECW1Q76N89 1606 aa19.24■□□□□ 0.67
CTNNA1-237ENST00000523275 ARID4BQ4LE39 1312 aaPredicted RBP19.24■□□□□ 0.67
CTNNA1-237ENST00000523275 TTC37Q6PGP7 1564 aa19.23■□□□□ 0.67
CTNNA1-237ENST00000523275 PLCH2O75038 1416 aa19.23■□□□□ 0.67
CTNNA1-237ENST00000523275 CFAP74Q9C0B2 1584 aa19.22■□□□□ 0.67
CTNNA1-237ENST00000523275 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
CTNNA1-237ENST00000523275 HECW2Q9P2P5 1572 aa19.19■□□□□ 0.66
CTNNA1-237ENST00000523275 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
CTNNA1-237ENST00000523275 RICTORQ6R327 1708 aa19.17■□□□□ 0.66
CTNNA1-237ENST00000523275 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
CTNNA1-237ENST00000523275 ADAMTSL3P82987 1691 aa19.16■□□□□ 0.66
CTNNA1-237ENST00000523275 PTPRMP28827 1452 aa19.16■□□□□ 0.66
CTNNA1-237ENST00000523275 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CTNNA1-237ENST00000523275 MAGI2Q86UL8 1455 aa19.14■□□□□ 0.65
CTNNA1-237ENST00000523275 ZMYM4Q5VZL5 1548 aa19.14■□□□□ 0.65
CTNNA1-237ENST00000523275 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.65
CTNNA1-237ENST00000523275 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
CTNNA1-237ENST00000523275 YEATS2Q9ULM3 1422 aa19.12■□□□□ 0.65
CTNNA1-237ENST00000523275 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms