RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 RUSC2Q8N2Y8 1516 aa13.91□□□□□ -0.18
GM2A-202ENST00000523004 IGF1RP08069 1367 aa13.89□□□□□ -0.19
GM2A-202ENST00000523004 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
GM2A-202ENST00000523004 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
GM2A-202ENST00000523004 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
GM2A-202ENST00000523004 CUL7Q14999 1698 aa13.84□□□□□ -0.19
GM2A-202ENST00000523004 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
GM2A-202ENST00000523004 ABCC10Q5T3U5 1492 aa13.81□□□□□ -0.2
GM2A-202ENST00000523004 MAPKBP1O60336 1514 aa13.81□□□□□ -0.2
GM2A-202ENST00000523004 ADCY10Q96PN6 1610 aa13.81□□□□□ -0.2
GM2A-202ENST00000523004 FAM69CQ0P6D2 419 aa13.8□□□□□ -0.2
GM2A-202ENST00000523004 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
GM2A-202ENST00000523004 DIP2BQ9P265 1576 aa13.77□□□□□ -0.21
GM2A-202ENST00000523004 PTPRGP23470 1445 aa13.74□□□□□ -0.21
GM2A-202ENST00000523004 CARMIL2Q6F5E8 1435 aa13.72□□□□□ -0.21
GM2A-202ENST00000523004 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.22
GM2A-202ENST00000523004 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
GM2A-202ENST00000523004 TSPOAP1O95153 1857 aa13.68□□□□□ -0.22
GM2A-202ENST00000523004 ABCC2Q92887 1545 aa13.68□□□□□ -0.22
GM2A-202ENST00000523004 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
GM2A-202ENST00000523004 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
GM2A-202ENST00000523004 KDM6BO15054 1643 aa13.65□□□□□ -0.22
GM2A-202ENST00000523004 UHRF1BP1LA0JNW5 1464 aa13.65□□□□□ -0.22
GM2A-202ENST00000523004 RAPGEF2Q9Y4G8 1499 aa13.65□□□□□ -0.22
GM2A-202ENST00000523004 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
GM2A-202ENST00000523004 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
GM2A-202ENST00000523004 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
GM2A-202ENST00000523004 UACAQ9BZF9 1416 aa13.63□□□□□ -0.23
GM2A-202ENST00000523004 GLI2P10070 1586 aa13.61□□□□□ -0.23
GM2A-202ENST00000523004 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
GM2A-202ENST00000523004 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
GM2A-202ENST00000523004 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.24
GM2A-202ENST00000523004 KIAA0556O60303 1618 aa13.57□□□□□ -0.24
GM2A-202ENST00000523004 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
GM2A-202ENST00000523004 ZCCHC11Q5TAX3 1644 aaKnown RBP13.54□□□□□ -0.24
GM2A-202ENST00000523004 MAP3K4Q9Y6R4 1608 aa13.53□□□□□ -0.24
GM2A-202ENST00000523004 CTTNBP2Q8WZ74 1663 aa13.53□□□□□ -0.24
GM2A-202ENST00000523004 PRXQ9BXM0 1461 aa13.5□□□□□ -0.25
GM2A-202ENST00000523004 COL17A1Q9UMD9 1497 aaPredicted RBP13.5□□□□□ -0.25
GM2A-202ENST00000523004 GOLGA3Q08378 1498 aa13.49□□□□□ -0.25
GM2A-202ENST00000523004 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
GM2A-202ENST00000523004 WDR7Q9Y4E6 1490 aa13.48□□□□□ -0.25
GM2A-202ENST00000523004 ABCA8O94911 1581 aa13.46□□□□□ -0.25
GM2A-202ENST00000523004 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
GM2A-202ENST00000523004 MAGI3Q5TCQ9 1506 aa13.42□□□□□ -0.26
GM2A-202ENST00000523004 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
GM2A-202ENST00000523004 CD109Q6YHK3 1445 aa13.41□□□□□ -0.26
GM2A-202ENST00000523004 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
GM2A-202ENST00000523004 CSRNP3Q8WYN3 585 aa13.37□□□□□ -0.27
GM2A-202ENST00000523004 ATP10BO94823 1461 aa13.36□□□□□ -0.27
GM2A-202ENST00000523004 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
GM2A-202ENST00000523004 FAM9AQ8IZU1 332 aaPredicted RBP13.36□□□□□ -0.27
GM2A-202ENST00000523004 SAMD9Q5K651 1589 aa13.33□□□□□ -0.28
GM2A-202ENST00000523004 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
GM2A-202ENST00000523004 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
GM2A-202ENST00000523004 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
GM2A-202ENST00000523004 RAPGEF6Q8TEU7 1601 aa13.3□□□□□ -0.28
GM2A-202ENST00000523004 EEA1Q15075 1411 aa13.3□□□□□ -0.28
GM2A-202ENST00000523004 PHLDB1Q86UU1 1377 aa13.29□□□□□ -0.28
GM2A-202ENST00000523004 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
GM2A-202ENST00000523004 KIF21BO75037 1637 aa13.26□□□□□ -0.29
GM2A-202ENST00000523004 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
GM2A-202ENST00000523004 NEO1Q92859 1461 aa13.24□□□□□ -0.29
GM2A-202ENST00000523004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.24□□□□□ -0.29
GM2A-202ENST00000523004 HNRNPUL2Q1KMD3 747 aaKnown RBP13.24□□□□□ -0.29
GM2A-202ENST00000523004 FHOD3Q2V2M9 1422 aa13.23□□□□□ -0.29
GM2A-202ENST00000523004 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
GM2A-202ENST00000523004 RANGAP1P46060 587 aaPredicted RBP13.22□□□□□ -0.29
GM2A-202ENST00000523004 ILDR1Q86SU0 546 aaPredicted RBP13.22□□□□□ -0.29
GM2A-202ENST00000523004 PLEKHD1A6NEE1 506 aa13.2□□□□□ -0.3
GM2A-202ENST00000523004 PHF23Q9BUL5 403 aaPredicted RBP13.2□□□□□ -0.3
GM2A-202ENST00000523004 FRMPD1Q5SYB0 1578 aa13.19□□□□□ -0.3
GM2A-202ENST00000523004 EFCAB5A4FU69 1503 aa13.18□□□□□ -0.3
GM2A-202ENST00000523004 ADAMTSL3P82987 1691 aa13.18□□□□□ -0.3
GM2A-202ENST00000523004 PTPRMP28827 1452 aa13.16□□□□□ -0.3
GM2A-202ENST00000523004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
GM2A-202ENST00000523004 AKNAQ7Z591 1439 aa13.14□□□□□ -0.31
GM2A-202ENST00000523004 BCORL1Q5H9F3 1711 aa13.14□□□□□ -0.31
GM2A-202ENST00000523004 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
GM2A-202ENST00000523004 FANCAO15360 1455 aa13.14□□□□□ -0.31
GM2A-202ENST00000523004 DENND4BO75064 1496 aaPredicted RBP13.14□□□□□ -0.31
GM2A-202ENST00000523004 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
GM2A-202ENST00000523004 ARHGEF40Q8TER5 1519 aa13.12□□□□□ -0.31
GM2A-202ENST00000523004 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
GM2A-202ENST00000523004 TTC37Q6PGP7 1564 aa13.11□□□□□ -0.31
GM2A-202ENST00000523004 CDK13Q14004 1512 aaKnown RBP13.11□□□□□ -0.31
GM2A-202ENST00000523004 MADDQ8WXG6 1647 aa13.1□□□□□ -0.31
GM2A-202ENST00000523004 ZMYM4Q5VZL5 1548 aa13.09□□□□□ -0.31
GM2A-202ENST00000523004 UBTFP17480 764 aaKnown RBP13.09□□□□□ -0.31
GM2A-202ENST00000523004 FMN1Q68DA7 1419 aa13.08□□□□□ -0.32
GM2A-202ENST00000523004 PLCH2O75038 1416 aa13.07□□□□□ -0.32
GM2A-202ENST00000523004 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
GM2A-202ENST00000523004 ARHGAP35Q9NRY4 1499 aa13.06□□□□□ -0.32
GM2A-202ENST00000523004 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
GM2A-202ENST00000523004 YEATS2Q9ULM3 1422 aa13.05□□□□□ -0.32
GM2A-202ENST00000523004 ZFYVE16Q7Z3T8 1539 aa13.05□□□□□ -0.32
GM2A-202ENST00000523004 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
GM2A-202ENST00000523004 RIMS1Q86UR5 1692 aaKnown RBP13.05□□□□□ -0.32
GM2A-202ENST00000523004 SCAPERQ9BY12 1400 aa13.05□□□□□ -0.32
GM2A-202ENST00000523004 LMTK3Q96Q04 1460 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms