RNA–Protein interactions for RNA: ENST00000522907.5

MSRA-208, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 5

Gene MSRA, Length 871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-208ENST00000522907 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
MSRA-208ENST00000522907 CLCN6P51797 869 aa10.29□□□□□ -0.76
MSRA-208ENST00000522907 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
MSRA-208ENST00000522907 CECR2Q9BXF3 1484 aa10.26□□□□□ -0.77
MSRA-208ENST00000522907 POTEJP0CG39 1038 aa10.23□□□□□ -0.77
MSRA-208ENST00000522907 STAG3Q9UJ98 1225 aa10.23□□□□□ -0.77
MSRA-208ENST00000522907 CC2D2AQ9P2K1 1620 aa10.22□□□□□ -0.77
MSRA-208ENST00000522907 SMARCA4P51532 1647 aa10.21□□□□□ -0.78
MSRA-208ENST00000522907 FARP1Q9Y4F1 1045 aaPredicted RBP10.19□□□□□ -0.78
MSRA-208ENST00000522907 MROH2BQ7Z745 1585 aa10.17□□□□□ -0.78
MSRA-208ENST00000522907 BAZ1AQ9NRL2 1556 aaPredicted RBP10.17□□□□□ -0.78
MSRA-208ENST00000522907 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
MSRA-208ENST00000522907 PELP1Q8IZL8 1130 aaKnown RBP10.15□□□□□ -0.78
MSRA-208ENST00000522907 PEG3Q9GZU2 1588 aa10.14□□□□□ -0.79
MSRA-208ENST00000522907 ZNF579Q8NAF0 562 aaKnown RBP10.14□□□□□ -0.79
MSRA-208ENST00000522907 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
MSRA-208ENST00000522907 ATAD2BQ9ULI0 1458 aa10.1□□□□□ -0.79
MSRA-208ENST00000522907 PROM2Q8N271 834 aa10.1□□□□□ -0.79
MSRA-208ENST00000522907 NCAPD3P42695 1498 aa10.09□□□□□ -0.79
MSRA-208ENST00000522907 RSF1Q96T23 1441 aaPredicted RBP10.07□□□□□ -0.8
MSRA-208ENST00000522907 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
MSRA-208ENST00000522907 FAM163AQ96GL9 167 aaPredicted RBP10.06□□□□□ -0.8
MSRA-208ENST00000522907 HMGXB3Q12766 1538 aa10.06□□□□□ -0.8
MSRA-208ENST00000522907 WIZO95785 1651 aa10.06□□□□□ -0.8
MSRA-208ENST00000522907 ZRANB1Q9UGI0 708 aa10□□□□□ -0.81
MSRA-208ENST00000522907 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
MSRA-208ENST00000522907 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
MSRA-208ENST00000522907 CDAN1Q8IWY9 1227 aa9.98□□□□□ -0.81
MSRA-208ENST00000522907 NPM1P06748 294 aaKnown RBP eCLIP9.95□□□□□ -0.82
MSRA-208ENST00000522907 TOP2AP11388 1531 aaKnown RBP9.95□□□□□ -0.82
MSRA-208ENST00000522907 PAK3O75914 559 aaPredicted RBP9.9□□□□□ -0.82
MSRA-208ENST00000522907 METRNQ9UJH8 293 aa9.89□□□□□ -0.83
MSRA-208ENST00000522907 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
MSRA-208ENST00000522907 FKBP8Q14318 412 aa9.88□□□□□ -0.83
MSRA-208ENST00000522907 ASTLQ6HA08 431 aaPredicted RBP9.85□□□□□ -0.83
MSRA-208ENST00000522907 MAMSTRQ6ZN01 415 aa9.85□□□□□ -0.83
MSRA-208ENST00000522907 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
MSRA-208ENST00000522907 C7P10643 843 aa9.82□□□□□ -0.84
MSRA-208ENST00000522907 CCDC88BA6NC98 1476 aa9.82□□□□□ -0.84
MSRA-208ENST00000522907 POTEFA5A3E0 1075 aa9.81□□□□□ -0.84
MSRA-208ENST00000522907 ATMINO43313 823 aaPredicted RBP9.81□□□□□ -0.84
MSRA-208ENST00000522907 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
MSRA-208ENST00000522907 MIER1Q8N108 512 aa9.81□□□□□ -0.84
MSRA-208ENST00000522907 NESP48681 1621 aa9.81□□□□□ -0.84
MSRA-208ENST00000522907 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
MSRA-208ENST00000522907 SLC39A7Q92504 469 aa9.78□□□□□ -0.84
MSRA-208ENST00000522907 LAMC3Q9Y6N6 1575 aa9.78□□□□□ -0.84
MSRA-208ENST00000522907 SUPT5HO00267 1087 aaKnown RBP9.77□□□□□ -0.85
MSRA-208ENST00000522907 CFTRP13569 1480 aa9.77□□□□□ -0.85
MSRA-208ENST00000522907 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
MSRA-208ENST00000522907 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
MSRA-208ENST00000522907 CCDC61Q9Y6R9 512 aa9.74□□□□□ -0.85
MSRA-208ENST00000522907 PRDM2Q13029 1718 aa9.73□□□□□ -0.85
MSRA-208ENST00000522907 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
MSRA-208ENST00000522907 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
MSRA-208ENST00000522907 KIF21AQ7Z4S6 1674 aa9.71□□□□□ -0.85
MSRA-208ENST00000522907 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
MSRA-208ENST00000522907 RASEFQ8IZ41 740 aa9.69□□□□□ -0.86
MSRA-208ENST00000522907 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
MSRA-208ENST00000522907 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
MSRA-208ENST00000522907 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
MSRA-208ENST00000522907 ST18O60284 1047 aa9.66□□□□□ -0.86
MSRA-208ENST00000522907 PDS5BQ9NTI5 1447 aa9.65□□□□□ -0.86
MSRA-208ENST00000522907 FANCD2Q9BXW9 1451 aa9.65□□□□□ -0.87
MSRA-208ENST00000522907 NUBP1P53384 320 aa9.64□□□□□ -0.87
MSRA-208ENST00000522907 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
MSRA-208ENST00000522907 FBXO3Q9UK99 471 aa9.63□□□□□ -0.87
MSRA-208ENST00000522907 ERCC6Q03468 1493 aa9.61□□□□□ -0.87
MSRA-208ENST00000522907 CEP164Q9UPV0 1460 aa9.6□□□□□ -0.87
MSRA-208ENST00000522907 MAP3K13O43283 966 aa9.6□□□□□ -0.87
MSRA-208ENST00000522907 WDR62O43379 1518 aa9.6□□□□□ -0.87
MSRA-208ENST00000522907 URB2Q14146 1524 aaKnown RBP9.6□□□□□ -0.87
MSRA-208ENST00000522907 MRC2Q9UBG0 1479 aa9.59□□□□□ -0.87
MSRA-208ENST00000522907 CUX2O14529 1486 aa9.55□□□□□ -0.88
MSRA-208ENST00000522907 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
MSRA-208ENST00000522907 TRPC6Q9Y210 931 aa9.55□□□□□ -0.88
MSRA-208ENST00000522907 TIE1P35590 1138 aa9.54□□□□□ -0.88
MSRA-208ENST00000522907 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
MSRA-208ENST00000522907 BMP2KQ9NSY1 1161 aaPredicted RBP9.54□□□□□ -0.88
MSRA-208ENST00000522907 COLQQ9Y215 455 aaPredicted RBP9.54□□□□□ -0.88
MSRA-208ENST00000522907 TOPBP1Q92547 1522 aa9.54□□□□□ -0.88
MSRA-208ENST00000522907 CUX1P39880 1505 aa9.53□□□□□ -0.88
MSRA-208ENST00000522907 DNMBPQ6XZF7 1577 aa9.53□□□□□ -0.88
MSRA-208ENST00000522907 PCDHB13Q9Y5F0 798 aa9.51□□□□□ -0.89
MSRA-208ENST00000522907 VASPP50552 380 aaPredicted RBP9.5□□□□□ -0.89
MSRA-208ENST00000522907 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
MSRA-208ENST00000522907 SYNJ1O43426 1573 aa9.49□□□□□ -0.89
MSRA-208ENST00000522907 BIVM-ERCC5R4GMW8 1640 aa9.49□□□□□ -0.89
MSRA-208ENST00000522907 TTLL13PA6NNM8 815 aa9.48□□□□□ -0.89
MSRA-208ENST00000522907 TOP2BQ02880 1626 aa9.47□□□□□ -0.89
MSRA-208ENST00000522907 TARBP1Q13395 1621 aaKnown RBP9.47□□□□□ -0.89
MSRA-208ENST00000522907 POLA1P09884 1462 aaPredicted RBP9.47□□□□□ -0.89
MSRA-208ENST00000522907 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.9
MSRA-208ENST00000522907 IFNL1Q8IU54 200 aa9.46□□□□□ -0.9
MSRA-208ENST00000522907 WRNQ14191 1432 aaPredicted RBP eCLIP9.45□□□□□ -0.9
MSRA-208ENST00000522907 FGD5Q6ZNL6 1462 aa9.44□□□□□ -0.9
MSRA-208ENST00000522907 WDR97A6NE52 1622 aa9.44□□□□□ -0.9
MSRA-208ENST00000522907 KLHL34Q8N239 644 aa9.43□□□□□ -0.9
MSRA-208ENST00000522907 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
MSRA-208ENST00000522907 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms