RNA–Protein interactions for RNA: ENST00000522572.5

VDAC3-211, Transcript of voltage dependent anion channel 3, humanhuman

TSL 5 BASIC

Gene VDAC3, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-211ENST00000522572 CUL7Q14999 1698 aa24.08■■□□□ 1.45
VDAC3-211ENST00000522572 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
VDAC3-211ENST00000522572 IGF1RP08069 1367 aa24.06■■□□□ 1.44
VDAC3-211ENST00000522572 KIAA0586Q9BVV6 1533 aa24.05■■□□□ 1.44
VDAC3-211ENST00000522572 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
VDAC3-211ENST00000522572 MAPKBP1O60336 1514 aa23.99■■□□□ 1.43
VDAC3-211ENST00000522572 ADCY10Q96PN6 1610 aa23.99■■□□□ 1.43
VDAC3-211ENST00000522572 ABCC10Q5T3U5 1492 aa23.97■■□□□ 1.43
VDAC3-211ENST00000522572 NPM1P06748 294 aaKnown RBP eCLIP23.96■■□□□ 1.43
VDAC3-211ENST00000522572 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
VDAC3-211ENST00000522572 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
VDAC3-211ENST00000522572 CARMIL1Q5VZK9 1371 aa23.9■■□□□ 1.42
VDAC3-211ENST00000522572 PTPRGP23470 1445 aa23.82■■□□□ 1.4
VDAC3-211ENST00000522572 IQGAP2Q13576 1575 aa23.81■■□□□ 1.4
VDAC3-211ENST00000522572 CARMIL2Q6F5E8 1435 aa23.8■■□□□ 1.4
VDAC3-211ENST00000522572 TNIKQ9UKE5 1360 aa23.78■■□□□ 1.4
VDAC3-211ENST00000522572 TSPOAP1O95153 1857 aa23.76■■□□□ 1.39
VDAC3-211ENST00000522572 ABCC2Q92887 1545 aa23.74■■□□□ 1.39
VDAC3-211ENST00000522572 KDM6BO15054 1643 aa23.73■■□□□ 1.39
VDAC3-211ENST00000522572 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
VDAC3-211ENST00000522572 DISP1Q96F81 1524 aa23.69■■□□□ 1.38
VDAC3-211ENST00000522572 UHRF1BP1LA0JNW5 1464 aa23.69■■□□□ 1.38
VDAC3-211ENST00000522572 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
VDAC3-211ENST00000522572 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
VDAC3-211ENST00000522572 PLB1Q6P1J6 1458 aa23.66■■□□□ 1.38
VDAC3-211ENST00000522572 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
VDAC3-211ENST00000522572 ASXL2Q76L83 1435 aa23.64■■□□□ 1.37
VDAC3-211ENST00000522572 GLI2P10070 1586 aa23.64■■□□□ 1.37
VDAC3-211ENST00000522572 PPRC1Q5VV67 1664 aaKnown RBP23.6■■□□□ 1.37
VDAC3-211ENST00000522572 KIAA0556O60303 1618 aa23.59■■□□□ 1.37
VDAC3-211ENST00000522572 KDM5BQ9UGL1 1544 aa23.58■■□□□ 1.36
VDAC3-211ENST00000522572 CTTNBP2Q8WZ74 1663 aa23.55■■□□□ 1.36
VDAC3-211ENST00000522572 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
VDAC3-211ENST00000522572 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
VDAC3-211ENST00000522572 MAP3K4Q9Y6R4 1608 aa23.51■■□□□ 1.35
VDAC3-211ENST00000522572 KDM4FA0A1W2PPD8 638 aa23.5■■□□□ 1.35
VDAC3-211ENST00000522572 GOLGA3Q08378 1498 aa23.44■■□□□ 1.34
VDAC3-211ENST00000522572 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
VDAC3-211ENST00000522572 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
VDAC3-211ENST00000522572 WDR7Q9Y4E6 1490 aa23.41■■□□□ 1.34
VDAC3-211ENST00000522572 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
VDAC3-211ENST00000522572 ABCA8O94911 1581 aa23.39■■□□□ 1.33
VDAC3-211ENST00000522572 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
VDAC3-211ENST00000522572 ADGRL1O94910 1474 aa23.31■■□□□ 1.32
VDAC3-211ENST00000522572 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
VDAC3-211ENST00000522572 CD109Q6YHK3 1445 aa23.26■■□□□ 1.31
VDAC3-211ENST00000522572 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
VDAC3-211ENST00000522572 SAMD9Q5K651 1589 aa23.19■■□□□ 1.3
VDAC3-211ENST00000522572 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
VDAC3-211ENST00000522572 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
VDAC3-211ENST00000522572 ATP10BO94823 1461 aa23.17■■□□□ 1.3
VDAC3-211ENST00000522572 P3H3Q8IVL6 736 aa23.16■■□□□ 1.3
VDAC3-211ENST00000522572 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
VDAC3-211ENST00000522572 ABCA9Q8IUA7 1624 aa23.11■■□□□ 1.29
VDAC3-211ENST00000522572 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
VDAC3-211ENST00000522572 ARAP3Q8WWN8 1544 aa23.11■■□□□ 1.29
VDAC3-211ENST00000522572 EEA1Q15075 1411 aa23.09■■□□□ 1.29
VDAC3-211ENST00000522572 KIF21BO75037 1637 aa23.06■■□□□ 1.28
VDAC3-211ENST00000522572 PHLDB1Q86UU1 1377 aa23.04■■□□□ 1.28
VDAC3-211ENST00000522572 HECW2Q9P2P5 1572 aa23.04■■□□□ 1.28
VDAC3-211ENST00000522572 NUP153P49790 1475 aaKnown RBP23.01■■□□□ 1.27
VDAC3-211ENST00000522572 NEO1Q92859 1461 aa22.99■■□□□ 1.27
VDAC3-211ENST00000522572 FHOD3Q2V2M9 1422 aa22.98■■□□□ 1.27
VDAC3-211ENST00000522572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
VDAC3-211ENST00000522572 HNRNPUL2Q1KMD3 747 aaKnown RBP22.97■■□□□ 1.27
VDAC3-211ENST00000522572 EFCAB5A4FU69 1503 aa22.93■■□□□ 1.26
VDAC3-211ENST00000522572 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
VDAC3-211ENST00000522572 RAPGEF3O95398 923 aa22.91■■□□□ 1.26
VDAC3-211ENST00000522572 FRMPD1Q5SYB0 1578 aa22.91■■□□□ 1.26
VDAC3-211ENST00000522572 ADAMTSL3P82987 1691 aa22.9■■□□□ 1.26
VDAC3-211ENST00000522572 ILDR1Q86SU0 546 aaPredicted RBP22.89■■□□□ 1.25
VDAC3-211ENST00000522572 PLEKHD1A6NEE1 506 aa22.87■■□□□ 1.25
VDAC3-211ENST00000522572 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
VDAC3-211ENST00000522572 RICTORQ6R327 1708 aa22.84■■□□□ 1.25
VDAC3-211ENST00000522572 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.83■■□□□ 1.25
VDAC3-211ENST00000522572 BCORL1Q5H9F3 1711 aa22.83■■□□□ 1.25
VDAC3-211ENST00000522572 PTPRMP28827 1452 aa22.82■■□□□ 1.24
VDAC3-211ENST00000522572 ARHGEF40Q8TER5 1519 aa22.81■■□□□ 1.24
VDAC3-211ENST00000522572 AKNAQ7Z591 1439 aa22.81■■□□□ 1.24
VDAC3-211ENST00000522572 TTC37Q6PGP7 1564 aa22.8■■□□□ 1.24
VDAC3-211ENST00000522572 FANCAO15360 1455 aa22.8■■□□□ 1.24
VDAC3-211ENST00000522572 DENND4BO75064 1496 aaPredicted RBP22.8■■□□□ 1.24
VDAC3-211ENST00000522572 MADDQ8WXG6 1647 aa22.78■■□□□ 1.24
VDAC3-211ENST00000522572 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
VDAC3-211ENST00000522572 ARID4BQ4LE39 1312 aaPredicted RBP22.75■■□□□ 1.23
VDAC3-211ENST00000522572 ZMYM4Q5VZL5 1548 aa22.74■■□□□ 1.23
VDAC3-211ENST00000522572 HECW1Q76N89 1606 aa22.71■■□□□ 1.23
VDAC3-211ENST00000522572 FMN1Q68DA7 1419 aa22.71■■□□□ 1.23
VDAC3-211ENST00000522572 RIMS1Q86UR5 1692 aaKnown RBP22.69■■□□□ 1.22
VDAC3-211ENST00000522572 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
VDAC3-211ENST00000522572 ZFYVE16Q7Z3T8 1539 aa22.68■■□□□ 1.22
VDAC3-211ENST00000522572 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
VDAC3-211ENST00000522572 PLCH2O75038 1416 aa22.68■■□□□ 1.22
VDAC3-211ENST00000522572 MAGI2Q86UL8 1455 aa22.67■■□□□ 1.22
VDAC3-211ENST00000522572 MYO5CQ9NQX4 1742 aa22.66■■□□□ 1.22
VDAC3-211ENST00000522572 PCF11O94913 1555 aaKnown RBP22.66■■□□□ 1.22
VDAC3-211ENST00000522572 SIGLEC1Q9BZZ2 1709 aa22.65■■□□□ 1.22
VDAC3-211ENST00000522572 POGZQ7Z3K3 1410 aa22.65■■□□□ 1.22
VDAC3-211ENST00000522572 YEATS2Q9ULM3 1422 aa22.65■■□□□ 1.22
VDAC3-211ENST00000522572 EHMT2Q96KQ7 1210 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms