RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 IGF1RP08069 1367 aa27.05■■□□□ 1.92
TRAPPC9-213ENST00000522504 KIF13AQ9H1H9 1805 aa27.04■■□□□ 1.92
TRAPPC9-213ENST00000522504 KIAA0586Q9BVV6 1533 aa26.96■■□□□ 1.91
TRAPPC9-213ENST00000522504 FAM69CQ0P6D2 419 aa26.95■■□□□ 1.9
TRAPPC9-213ENST00000522504 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
TRAPPC9-213ENST00000522504 ADCY10Q96PN6 1610 aa26.94■■□□□ 1.9
TRAPPC9-213ENST00000522504 ABCC10Q5T3U5 1492 aa26.94■■□□□ 1.9
TRAPPC9-213ENST00000522504 MAPKBP1O60336 1514 aa26.91■■□□□ 1.9
TRAPPC9-213ENST00000522504 NPM1P06748 294 aaKnown RBP eCLIP26.91■■□□□ 1.9
TRAPPC9-213ENST00000522504 CUL7Q14999 1698 aa26.87■■□□□ 1.89
TRAPPC9-213ENST00000522504 DIP2BQ9P265 1576 aa26.85■■□□□ 1.89
TRAPPC9-213ENST00000522504 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
TRAPPC9-213ENST00000522504 PTPRGP23470 1445 aa26.77■■□□□ 1.88
TRAPPC9-213ENST00000522504 TTBK1Q5TCY1 1321 aaPredicted RBP26.76■■□□□ 1.87
TRAPPC9-213ENST00000522504 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
TRAPPC9-213ENST00000522504 CARMIL2Q6F5E8 1435 aa26.65■■□□□ 1.86
TRAPPC9-213ENST00000522504 ABCC2Q92887 1545 aa26.65■■□□□ 1.86
TRAPPC9-213ENST00000522504 IQGAP2Q13576 1575 aa26.64■■□□□ 1.86
TRAPPC9-213ENST00000522504 KDM6BO15054 1643 aa26.64■■□□□ 1.85
TRAPPC9-213ENST00000522504 TSPOAP1O95153 1857 aa26.64■■□□□ 1.85
TRAPPC9-213ENST00000522504 DISP1Q96F81 1524 aa26.61■■□□□ 1.85
TRAPPC9-213ENST00000522504 ASXL2Q76L83 1435 aa26.6■■□□□ 1.85
TRAPPC9-213ENST00000522504 KDM4FA0A1W2PPD8 638 aa26.6■■□□□ 1.85
TRAPPC9-213ENST00000522504 UHRF1BP1LA0JNW5 1464 aa26.56■■□□□ 1.84
TRAPPC9-213ENST00000522504 UACAQ9BZF9 1416 aa26.55■■□□□ 1.84
TRAPPC9-213ENST00000522504 PLB1Q6P1J6 1458 aa26.54■■□□□ 1.84
TRAPPC9-213ENST00000522504 RAPGEF2Q9Y4G8 1499 aa26.53■■□□□ 1.84
TRAPPC9-213ENST00000522504 GLI2P10070 1586 aa26.5■■□□□ 1.83
TRAPPC9-213ENST00000522504 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
TRAPPC9-213ENST00000522504 PPRC1Q5VV67 1664 aaKnown RBP26.49■■□□□ 1.83
TRAPPC9-213ENST00000522504 KDM5BQ9UGL1 1544 aa26.46■■□□□ 1.83
TRAPPC9-213ENST00000522504 EPRSP07814 1512 aaKnown RBP26.43■■□□□ 1.82
TRAPPC9-213ENST00000522504 KIAA0556O60303 1618 aa26.42■■□□□ 1.82
TRAPPC9-213ENST00000522504 COL17A1Q9UMD9 1497 aaPredicted RBP26.42■■□□□ 1.82
TRAPPC9-213ENST00000522504 ZCCHC11Q5TAX3 1644 aaKnown RBP26.38■■□□□ 1.81
TRAPPC9-213ENST00000522504 MAP3K4Q9Y6R4 1608 aa26.35■■□□□ 1.81
TRAPPC9-213ENST00000522504 WDR7Q9Y4E6 1490 aa26.28■■□□□ 1.8
TRAPPC9-213ENST00000522504 ADGRL1O94910 1474 aa26.27■■□□□ 1.8
TRAPPC9-213ENST00000522504 TEX14Q8IWB6 1497 aa26.25■■□□□ 1.79
TRAPPC9-213ENST00000522504 PRXQ9BXM0 1461 aa26.24■■□□□ 1.79
TRAPPC9-213ENST00000522504 CTTNBP2Q8WZ74 1663 aa26.24■■□□□ 1.79
TRAPPC9-213ENST00000522504 ABCA8O94911 1581 aa26.21■■□□□ 1.79
TRAPPC9-213ENST00000522504 GOLGA3Q08378 1498 aa26.21■■□□□ 1.79
TRAPPC9-213ENST00000522504 KCNH8Q96L42 1107 aa26.18■■□□□ 1.78
TRAPPC9-213ENST00000522504 CD109Q6YHK3 1445 aa26.15■■□□□ 1.78
TRAPPC9-213ENST00000522504 MAGI3Q5TCQ9 1506 aa26.13■■□□□ 1.77
TRAPPC9-213ENST00000522504 ARID3CA6NKF2 412 aa26.1■■□□□ 1.77
TRAPPC9-213ENST00000522504 P3H3Q8IVL6 736 aa26.1■■□□□ 1.77
TRAPPC9-213ENST00000522504 CFAP43Q8NDM7 1665 aa26.06■■□□□ 1.76
TRAPPC9-213ENST00000522504 ATP10BO94823 1461 aa26.04■■□□□ 1.76
TRAPPC9-213ENST00000522504 ILDR1Q86SU0 546 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC9-213ENST00000522504 CSRNP3Q8WYN3 585 aa25.97■■□□□ 1.75
TRAPPC9-213ENST00000522504 HECW2Q9P2P5 1572 aa25.96■■□□□ 1.75
TRAPPC9-213ENST00000522504 ARAP3Q8WWN8 1544 aa25.93■■□□□ 1.74
TRAPPC9-213ENST00000522504 SAMD9Q5K651 1589 aa25.93■■□□□ 1.74
TRAPPC9-213ENST00000522504 KIF21BO75037 1637 aa25.88■■□□□ 1.73
TRAPPC9-213ENST00000522504 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
TRAPPC9-213ENST00000522504 ABCA9Q8IUA7 1624 aa25.88■■□□□ 1.73
TRAPPC9-213ENST00000522504 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
TRAPPC9-213ENST00000522504 RAPGEF3O95398 923 aa25.85■■□□□ 1.73
TRAPPC9-213ENST00000522504 RANGAP1P46060 587 aaPredicted RBP25.84■■□□□ 1.73
TRAPPC9-213ENST00000522504 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
TRAPPC9-213ENST00000522504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.81■■□□□ 1.72
TRAPPC9-213ENST00000522504 HNRNPUL2Q1KMD3 747 aaKnown RBP25.81■■□□□ 1.72
TRAPPC9-213ENST00000522504 PHLDB1Q86UU1 1377 aa25.81■■□□□ 1.72
TRAPPC9-213ENST00000522504 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
TRAPPC9-213ENST00000522504 NEO1Q92859 1461 aa25.77■■□□□ 1.72
TRAPPC9-213ENST00000522504 EEA1Q15075 1411 aa25.74■■□□□ 1.71
TRAPPC9-213ENST00000522504 FRMPD1Q5SYB0 1578 aa25.73■■□□□ 1.71
TRAPPC9-213ENST00000522504 ADAMTSL3P82987 1691 aa25.7■■□□□ 1.7
TRAPPC9-213ENST00000522504 PTPRMP28827 1452 aa25.69■■□□□ 1.7
TRAPPC9-213ENST00000522504 PLEKHD1A6NEE1 506 aa25.66■■□□□ 1.7
TRAPPC9-213ENST00000522504 ARID4BQ4LE39 1312 aaPredicted RBP25.62■■□□□ 1.69
TRAPPC9-213ENST00000522504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.61■■□□□ 1.69
TRAPPC9-213ENST00000522504 AKNAQ7Z591 1439 aa25.61■■□□□ 1.69
TRAPPC9-213ENST00000522504 DENND4BO75064 1496 aaPredicted RBP25.6■■□□□ 1.69
TRAPPC9-213ENST00000522504 BCORL1Q5H9F3 1711 aa25.6■■□□□ 1.69
TRAPPC9-213ENST00000522504 FANCAO15360 1455 aa25.59■■□□□ 1.69
TRAPPC9-213ENST00000522504 EFCAB5A4FU69 1503 aa25.58■■□□□ 1.69
TRAPPC9-213ENST00000522504 MADDQ8WXG6 1647 aa25.58■■□□□ 1.69
TRAPPC9-213ENST00000522504 TTC37Q6PGP7 1564 aa25.57■■□□□ 1.68
TRAPPC9-213ENST00000522504 ARHGEF40Q8TER5 1519 aa25.57■■□□□ 1.68
TRAPPC9-213ENST00000522504 RICTORQ6R327 1708 aa25.56■■□□□ 1.68
TRAPPC9-213ENST00000522504 CDK13Q14004 1512 aaKnown RBP25.56■■□□□ 1.68
TRAPPC9-213ENST00000522504 EHMT2Q96KQ7 1210 aa25.54■■□□□ 1.68
TRAPPC9-213ENST00000522504 YEATS2Q9ULM3 1422 aa25.5■■□□□ 1.67
TRAPPC9-213ENST00000522504 LMTK3Q96Q04 1460 aa25.48■■□□□ 1.67
TRAPPC9-213ENST00000522504 CFAP74Q9C0B2 1584 aa25.48■■□□□ 1.67
TRAPPC9-213ENST00000522504 ZMYM4Q5VZL5 1548 aa25.47■■□□□ 1.67
TRAPPC9-213ENST00000522504 SIGLEC1Q9BZZ2 1709 aa25.47■■□□□ 1.67
TRAPPC9-213ENST00000522504 PCF11O94913 1555 aaKnown RBP25.47■■□□□ 1.67
TRAPPC9-213ENST00000522504 RIMS1Q86UR5 1692 aaKnown RBP25.45■■□□□ 1.66
TRAPPC9-213ENST00000522504 PLCH2O75038 1416 aa25.45■■□□□ 1.66
TRAPPC9-213ENST00000522504 ZFYVE16Q7Z3T8 1539 aa25.44■■□□□ 1.66
TRAPPC9-213ENST00000522504 UBTFP17480 764 aaKnown RBP25.44■■□□□ 1.66
TRAPPC9-213ENST00000522504 SCAPERQ9BY12 1400 aa25.43■■□□□ 1.66
TRAPPC9-213ENST00000522504 ARHGAP35Q9NRY4 1499 aa25.42■■□□□ 1.66
TRAPPC9-213ENST00000522504 FBXO41Q8TF61 875 aa25.42■■□□□ 1.66
TRAPPC9-213ENST00000522504 ATP1B4Q9UN42 357 aaPredicted RBP25.42■■□□□ 1.66
TRAPPC9-213ENST00000522504 HECW1Q76N89 1606 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms