RNA–Protein interactions for RNA: ENST00000522456.1

HOXA3-205, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-205ENST00000522456 IGF1RP08069 1367 aa37.28■■■■□ 3.56
HOXA3-205ENST00000522456 CUL7Q14999 1698 aa37.28■■■■□ 3.56
HOXA3-205ENST00000522456 KIF13AQ9H1H9 1805 aa37.22■■■■□ 3.55
HOXA3-205ENST00000522456 KIAA0586Q9BVV6 1533 aa37.22■■■■□ 3.55
HOXA3-205ENST00000522456 AEBP2Q6ZN18 517 aaPredicted RBP37.13■■■■□ 3.53
HOXA3-205ENST00000522456 ADCY10Q96PN6 1610 aa37.1■■■■□ 3.53
HOXA3-205ENST00000522456 NPM1P06748 294 aaKnown RBP eCLIP37.09■■■■□ 3.53
HOXA3-205ENST00000522456 MAPKBP1O60336 1514 aa37.09■■■■□ 3.53
HOXA3-205ENST00000522456 ABCC10Q5T3U5 1492 aa37.05■■■■□ 3.52
HOXA3-205ENST00000522456 CARMIL1Q5VZK9 1371 aa37.04■■■■□ 3.52
HOXA3-205ENST00000522456 FAM69CQ0P6D2 419 aa36.99■■■■□ 3.51
HOXA3-205ENST00000522456 DIP2BQ9P265 1576 aa36.98■■■■□ 3.51
HOXA3-205ENST00000522456 PTPRGP23470 1445 aa36.88■■■■□ 3.49
HOXA3-205ENST00000522456 IQGAP2Q13576 1575 aa36.87■■■■□ 3.49
HOXA3-205ENST00000522456 CARMIL2Q6F5E8 1435 aa36.86■■■■□ 3.49
HOXA3-205ENST00000522456 TNIKQ9UKE5 1360 aa36.82■■■■□ 3.49
HOXA3-205ENST00000522456 TTBK1Q5TCY1 1321 aaPredicted RBP36.79■■■■□ 3.48
HOXA3-205ENST00000522456 CHIC1Q5VXU3 224 aa36.76■■■■□ 3.48
HOXA3-205ENST00000522456 RAPGEF2Q9Y4G8 1499 aa36.75■■■■□ 3.47
HOXA3-205ENST00000522456 ABCC2Q92887 1545 aa36.74■■■■□ 3.47
HOXA3-205ENST00000522456 KDM6BO15054 1643 aa36.69■■■■□ 3.46
HOXA3-205ENST00000522456 DISP1Q96F81 1524 aa36.69■■■■□ 3.46
HOXA3-205ENST00000522456 TSPOAP1O95153 1857 aa36.69■■■■□ 3.46
HOXA3-205ENST00000522456 UHRF1BP1LA0JNW5 1464 aa36.65■■■■□ 3.46
HOXA3-205ENST00000522456 UGGT2Q9NYU1 1516 aa36.62■■■■□ 3.45
HOXA3-205ENST00000522456 UACAQ9BZF9 1416 aa36.61■■■■□ 3.45
HOXA3-205ENST00000522456 ASXL2Q76L83 1435 aa36.6■■■■□ 3.45
HOXA3-205ENST00000522456 PLB1Q6P1J6 1458 aa36.6■■■■□ 3.45
HOXA3-205ENST00000522456 KIAA0556O60303 1618 aa36.55■■■■□ 3.44
HOXA3-205ENST00000522456 PRXQ9BXM0 1461 aa36.54■■■■□ 3.44
HOXA3-205ENST00000522456 GLI2P10070 1586 aa36.53■■■■□ 3.44
HOXA3-205ENST00000522456 CSRNP3Q8WYN3 585 aa36.53■■■■□ 3.44
HOXA3-205ENST00000522456 EEA1Q15075 1411 aa36.5■■■■□ 3.43
HOXA3-205ENST00000522456 FAM9AQ8IZU1 332 aaPredicted RBP36.49■■■■□ 3.43
HOXA3-205ENST00000522456 KDM5BQ9UGL1 1544 aa36.48■■■■□ 3.43
HOXA3-205ENST00000522456 PPRC1Q5VV67 1664 aaKnown RBP36.45■■■■□ 3.43
HOXA3-205ENST00000522456 CTTNBP2Q8WZ74 1663 aa36.45■■■■□ 3.42
HOXA3-205ENST00000522456 ZCCHC11Q5TAX3 1644 aaKnown RBP36.42■■■■□ 3.42
HOXA3-205ENST00000522456 EPRSP07814 1512 aaKnown RBP36.39■■■■□ 3.42
HOXA3-205ENST00000522456 MAP3K4Q9Y6R4 1608 aa36.34■■■■□ 3.41
HOXA3-205ENST00000522456 GOLGA3Q08378 1498 aa36.32■■■■□ 3.41
HOXA3-205ENST00000522456 KDM4FA0A1W2PPD8 638 aa36.31■■■■□ 3.4
HOXA3-205ENST00000522456 TEX14Q8IWB6 1497 aa36.24■■■■□ 3.39
HOXA3-205ENST00000522456 WDR7Q9Y4E6 1490 aa36.24■■■■□ 3.39
HOXA3-205ENST00000522456 ABCA8O94911 1581 aa36.2■■■■□ 3.39
HOXA3-205ENST00000522456 COL17A1Q9UMD9 1497 aaPredicted RBP36.18■■■■□ 3.38
HOXA3-205ENST00000522456 KIF21BO75037 1637 aa36.12■■■■□ 3.37
HOXA3-205ENST00000522456 ADGRL1O94910 1474 aa36.05■■■■□ 3.36
HOXA3-205ENST00000522456 EHMT2Q96KQ7 1210 aa36.05■■■■□ 3.36
HOXA3-205ENST00000522456 CFAP43Q8NDM7 1665 aa36.04■■■■□ 3.36
HOXA3-205ENST00000522456 CD109Q6YHK3 1445 aa36.02■■■■□ 3.36
HOXA3-205ENST00000522456 MAGI3Q5TCQ9 1506 aa36.01■■■■□ 3.36
HOXA3-205ENST00000522456 KCNH8Q96L42 1107 aa36■■■■□ 3.35
HOXA3-205ENST00000522456 SAMD9Q5K651 1589 aa35.95■■■■□ 3.35
HOXA3-205ENST00000522456 UBTFP17480 764 aaKnown RBP35.94■■■■□ 3.34
HOXA3-205ENST00000522456 P3H3Q8IVL6 736 aa35.94■■■■□ 3.34
HOXA3-205ENST00000522456 RANGAP1P46060 587 aaPredicted RBP35.91■■■■□ 3.34
HOXA3-205ENST00000522456 ATP10BO94823 1461 aa35.87■■■■□ 3.33
HOXA3-205ENST00000522456 ARID3CA6NKF2 412 aa35.87■■■■□ 3.33
HOXA3-205ENST00000522456 RAPGEF6Q8TEU7 1601 aa35.8■■■■□ 3.32
HOXA3-205ENST00000522456 EFCAB5A4FU69 1503 aa35.79■■■■□ 3.32
HOXA3-205ENST00000522456 ABCA9Q8IUA7 1624 aa35.75■■■■□ 3.31
HOXA3-205ENST00000522456 ARAP3Q8WWN8 1544 aa35.73■■■■□ 3.31
HOXA3-205ENST00000522456 FHOD3Q2V2M9 1422 aa35.67■■■■□ 3.3
HOXA3-205ENST00000522456 NUP153P49790 1475 aaKnown RBP35.66■■■■□ 3.3
HOXA3-205ENST00000522456 PHLDB1Q86UU1 1377 aa35.64■■■■□ 3.3
HOXA3-205ENST00000522456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.63■■■■□ 3.29
HOXA3-205ENST00000522456 HNRNPUL2Q1KMD3 747 aaKnown RBP35.63■■■■□ 3.29
HOXA3-205ENST00000522456 HECW2Q9P2P5 1572 aa35.6■■■■□ 3.29
HOXA3-205ENST00000522456 NEO1Q92859 1461 aa35.57■■■■□ 3.28
HOXA3-205ENST00000522456 RAPGEF3O95398 923 aa35.48■■■■□ 3.27
HOXA3-205ENST00000522456 ARHGAP35Q9NRY4 1499 aa35.47■■■■□ 3.27
HOXA3-205ENST00000522456 FRMPD1Q5SYB0 1578 aa35.45■■■■□ 3.27
HOXA3-205ENST00000522456 FMN1Q68DA7 1419 aa35.44■■■■□ 3.26
HOXA3-205ENST00000522456 PLEKHD1A6NEE1 506 aa35.44■■■■□ 3.26
HOXA3-205ENST00000522456 ADAMTSL3P82987 1691 aa35.36■■■■□ 3.25
HOXA3-205ENST00000522456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.36■■■■□ 3.25
HOXA3-205ENST00000522456 CFAP74Q9C0B2 1584 aa35.34■■■■□ 3.25
HOXA3-205ENST00000522456 ILDR1Q86SU0 546 aaPredicted RBP35.32■■■■□ 3.24
HOXA3-205ENST00000522456 FANCAO15360 1455 aa35.32■■■■□ 3.24
HOXA3-205ENST00000522456 TTC37Q6PGP7 1564 aa35.32■■■■□ 3.24
HOXA3-205ENST00000522456 HECW1Q76N89 1606 aa35.32■■■■□ 3.24
HOXA3-205ENST00000522456 DENND4BO75064 1496 aaPredicted RBP35.31■■■■□ 3.24
HOXA3-205ENST00000522456 LOC105371045A0A1W2PR82 267 aa35.31■■■■□ 3.24
HOXA3-205ENST00000522456 CDK13Q14004 1512 aaKnown RBP35.31■■■■□ 3.24
HOXA3-205ENST00000522456 AKNAQ7Z591 1439 aa35.31■■■■□ 3.24
HOXA3-205ENST00000522456 ARHGEF40Q8TER5 1519 aa35.3■■■■□ 3.24
HOXA3-205ENST00000522456 PTPRMP28827 1452 aa35.29■■■■□ 3.24
HOXA3-205ENST00000522456 RICTORQ6R327 1708 aa35.29■■■■□ 3.24
HOXA3-205ENST00000522456 CLIP1P30622 1438 aa35.29■■■■□ 3.24
HOXA3-205ENST00000522456 ATP1B4Q9UN42 357 aaPredicted RBP35.28■■■■□ 3.24
HOXA3-205ENST00000522456 BCORL1Q5H9F3 1711 aa35.28■■■■□ 3.24
HOXA3-205ENST00000522456 ARID4BQ4LE39 1312 aaPredicted RBP35.24■■■■□ 3.23
HOXA3-205ENST00000522456 MADDQ8WXG6 1647 aa35.21■■■■□ 3.23
HOXA3-205ENST00000522456 ZMYM4Q5VZL5 1548 aa35.18■■■■□ 3.22
HOXA3-205ENST00000522456 CEP162Q5TB80 1403 aa35.13■■■■□ 3.21
HOXA3-205ENST00000522456 PLCH2O75038 1416 aa35.12■■■■□ 3.21
HOXA3-205ENST00000522456 ZFYVE16Q7Z3T8 1539 aa35.11■■■■□ 3.21
HOXA3-205ENST00000522456 CASKIN1Q8WXD9 1431 aa35.09■■■■□ 3.21
HOXA3-205ENST00000522456 CDK11AQ9UQ88 783 aaPredicted RBP35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms