RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 KDM6BO15054 1643 aa19.08■□□□□ 0.65
MRPS28-208ENST00000521605 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
MRPS28-208ENST00000521605 NPM1P06748 294 aaKnown RBP eCLIP19.07■□□□□ 0.64
MRPS28-208ENST00000521605 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
MRPS28-208ENST00000521605 WRNQ14191 1432 aaPredicted RBP eCLIP19.05■□□□□ 0.64
MRPS28-208ENST00000521605 JPH4Q96JJ6 628 aa19.02■□□□□ 0.64
MRPS28-208ENST00000521605 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
MRPS28-208ENST00000521605 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
MRPS28-208ENST00000521605 ADCY10Q96PN6 1610 aa18.97■□□□□ 0.63
MRPS28-208ENST00000521605 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
MRPS28-208ENST00000521605 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
MRPS28-208ENST00000521605 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
MRPS28-208ENST00000521605 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
MRPS28-208ENST00000521605 ADGRL1O94910 1474 aa18.88■□□□□ 0.61
MRPS28-208ENST00000521605 TTBK1Q5TCY1 1321 aaPredicted RBP18.83■□□□□ 0.61
MRPS28-208ENST00000521605 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
MRPS28-208ENST00000521605 PPRC1Q5VV67 1664 aaKnown RBP18.75■□□□□ 0.59
MRPS28-208ENST00000521605 KIAA0586Q9BVV6 1533 aa18.73■□□□□ 0.59
MRPS28-208ENST00000521605 SUPT5HO00267 1087 aaKnown RBP18.72■□□□□ 0.59
MRPS28-208ENST00000521605 PTPRGP23470 1445 aa18.72■□□□□ 0.59
MRPS28-208ENST00000521605 ASXL2Q76L83 1435 aa18.71■□□□□ 0.59
MRPS28-208ENST00000521605 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
MRPS28-208ENST00000521605 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
MRPS28-208ENST00000521605 GLI2P10070 1586 aa18.68■□□□□ 0.58
MRPS28-208ENST00000521605 PLB1Q6P1J6 1458 aa18.67■□□□□ 0.58
MRPS28-208ENST00000521605 CUL7Q14999 1698 aa18.66■□□□□ 0.58
MRPS28-208ENST00000521605 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
MRPS28-208ENST00000521605 CARMIL2Q6F5E8 1435 aa18.59■□□□□ 0.57
MRPS28-208ENST00000521605 IGF1RP08069 1367 aa18.59■□□□□ 0.57
MRPS28-208ENST00000521605 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
MRPS28-208ENST00000521605 MAP3K4Q9Y6R4 1608 aa18.58■□□□□ 0.56
MRPS28-208ENST00000521605 EPRSP07814 1512 aaKnown RBP18.58■□□□□ 0.56
MRPS28-208ENST00000521605 TEX14Q8IWB6 1497 aa18.58■□□□□ 0.56
MRPS28-208ENST00000521605 UHRF1BP1LA0JNW5 1464 aa18.54■□□□□ 0.56
MRPS28-208ENST00000521605 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
MRPS28-208ENST00000521605 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
MRPS28-208ENST00000521605 IQGAP2Q13576 1575 aa18.5■□□□□ 0.55
MRPS28-208ENST00000521605 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
MRPS28-208ENST00000521605 KDM5BQ9UGL1 1544 aa18.48■□□□□ 0.55
MRPS28-208ENST00000521605 CARMIL1Q5VZK9 1371 aa18.47■□□□□ 0.55
MRPS28-208ENST00000521605 DISP1Q96F81 1524 aa18.45■□□□□ 0.54
MRPS28-208ENST00000521605 KIF21BO75037 1637 aa18.44■□□□□ 0.54
MRPS28-208ENST00000521605 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
MRPS28-208ENST00000521605 CD109Q6YHK3 1445 aa18.38■□□□□ 0.53
MRPS28-208ENST00000521605 KCNH8Q96L42 1107 aa18.37■□□□□ 0.53
MRPS28-208ENST00000521605 KIAA0556O60303 1618 aa18.34■□□□□ 0.53
MRPS28-208ENST00000521605 MAGI3Q5TCQ9 1506 aa18.34■□□□□ 0.53
MRPS28-208ENST00000521605 CFAP43Q8NDM7 1665 aa18.34■□□□□ 0.53
MRPS28-208ENST00000521605 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.52
MRPS28-208ENST00000521605 UGGT2Q9NYU1 1516 aa18.32■□□□□ 0.52
MRPS28-208ENST00000521605 PTPRMP28827 1452 aa18.32■□□□□ 0.52
MRPS28-208ENST00000521605 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
MRPS28-208ENST00000521605 FOXD1Q16676 465 aa18.25■□□□□ 0.51
MRPS28-208ENST00000521605 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
MRPS28-208ENST00000521605 RAPGEF2Q9Y4G8 1499 aa18.23■□□□□ 0.51
MRPS28-208ENST00000521605 ARAP3Q8WWN8 1544 aa18.22■□□□□ 0.51
MRPS28-208ENST00000521605 ARID3CA6NKF2 412 aa18.21■□□□□ 0.51
MRPS28-208ENST00000521605 ARID4BQ4LE39 1312 aaPredicted RBP18.21■□□□□ 0.51
MRPS28-208ENST00000521605 MADDQ8WXG6 1647 aa18.2■□□□□ 0.5
MRPS28-208ENST00000521605 ABCA8O94911 1581 aa18.19■□□□□ 0.5
MRPS28-208ENST00000521605 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
MRPS28-208ENST00000521605 RAPGEF3O95398 923 aa18.17■□□□□ 0.5
MRPS28-208ENST00000521605 HSPA2P54652 639 aa18.17■□□□□ 0.5
MRPS28-208ENST00000521605 BCORL1Q5H9F3 1711 aa18.17■□□□□ 0.5
MRPS28-208ENST00000521605 ILDR2Q71H61 639 aa18.14■□□□□ 0.49
MRPS28-208ENST00000521605 RIMS1Q86UR5 1692 aaKnown RBP18.13■□□□□ 0.49
MRPS28-208ENST00000521605 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
MRPS28-208ENST00000521605 DISP3Q9P2K9 1392 aa18.13■□□□□ 0.49
MRPS28-208ENST00000521605 GOLGA3Q08378 1498 aa18.13■□□□□ 0.49
MRPS28-208ENST00000521605 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
MRPS28-208ENST00000521605 SOCS7O14512 581 aa18.09■□□□□ 0.49
MRPS28-208ENST00000521605 ABCA9Q8IUA7 1624 aa18.09■□□□□ 0.49
MRPS28-208ENST00000521605 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
MRPS28-208ENST00000521605 FRMPD1Q5SYB0 1578 aa18.07■□□□□ 0.48
MRPS28-208ENST00000521605 ATP10BO94823 1461 aa18.05■□□□□ 0.48
MRPS28-208ENST00000521605 NEO1Q92859 1461 aa18.04■□□□□ 0.48
MRPS28-208ENST00000521605 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
MRPS28-208ENST00000521605 ARHGEF40Q8TER5 1519 aa18.01■□□□□ 0.47
MRPS28-208ENST00000521605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18■□□□□ 0.47
MRPS28-208ENST00000521605 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
MRPS28-208ENST00000521605 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
MRPS28-208ENST00000521605 MLECQ14165 292 aa17.97■□□□□ 0.47
MRPS28-208ENST00000521605 POGZQ7Z3K3 1410 aa17.95■□□□□ 0.46
MRPS28-208ENST00000521605 FANCAO15360 1455 aa17.95■□□□□ 0.46
MRPS28-208ENST00000521605 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
MRPS28-208ENST00000521605 SPATA31D1Q6ZQQ2 1576 aa17.94■□□□□ 0.46
MRPS28-208ENST00000521605 RICTORQ6R327 1708 aa17.94■□□□□ 0.46
MRPS28-208ENST00000521605 SIGLEC1Q9BZZ2 1709 aa17.93■□□□□ 0.46
MRPS28-208ENST00000521605 AKNAQ7Z591 1439 aa17.91■□□□□ 0.46
MRPS28-208ENST00000521605 RAPGEF6Q8TEU7 1601 aa17.9■□□□□ 0.46
MRPS28-208ENST00000521605 FER1L4A9Z1Z3 1794 aa17.9■□□□□ 0.46
MRPS28-208ENST00000521605 YEATS2Q9ULM3 1422 aa17.89■□□□□ 0.46
MRPS28-208ENST00000521605 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
MRPS28-208ENST00000521605 ZFYVE16Q7Z3T8 1539 aa17.88■□□□□ 0.45
MRPS28-208ENST00000521605 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
MRPS28-208ENST00000521605 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
MRPS28-208ENST00000521605 PRXQ9BXM0 1461 aa17.86■□□□□ 0.45
MRPS28-208ENST00000521605 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
MRPS28-208ENST00000521605 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
MRPS28-208ENST00000521605 CFAP74Q9C0B2 1584 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms