RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 KIF27Q86VH2 1401 aa35.65■■■■□ 3.3
SNHG6-205ENST00000521399 CUL7Q14999 1698 aa35.57■■■■□ 3.28
SNHG6-205ENST00000521399 KIAA0586Q9BVV6 1533 aa35.57■■■■□ 3.28
SNHG6-205ENST00000521399 KIF13AQ9H1H9 1805 aa35.55■■■■□ 3.28
SNHG6-205ENST00000521399 AEBP2Q6ZN18 517 aaPredicted RBP35.46■■■■□ 3.27
SNHG6-205ENST00000521399 NPM1P06748 294 aaKnown RBP eCLIP35.45■■■■□ 3.27
SNHG6-205ENST00000521399 ADCY10Q96PN6 1610 aa35.42■■■■□ 3.26
SNHG6-205ENST00000521399 CARMIL1Q5VZK9 1371 aa35.41■■■■□ 3.26
SNHG6-205ENST00000521399 MAPKBP1O60336 1514 aa35.4■■■■□ 3.26
SNHG6-205ENST00000521399 ABCC10Q5T3U5 1492 aa35.39■■■■□ 3.26
SNHG6-205ENST00000521399 FAM69CQ0P6D2 419 aa35.36■■■■□ 3.25
SNHG6-205ENST00000521399 DIP2BQ9P265 1576 aa35.28■■■■□ 3.24
SNHG6-205ENST00000521399 PTPRGP23470 1445 aa35.25■■■■□ 3.23
SNHG6-205ENST00000521399 CARMIL2Q6F5E8 1435 aa35.21■■■■□ 3.23
SNHG6-205ENST00000521399 IQGAP2Q13576 1575 aa35.2■■■■□ 3.23
SNHG6-205ENST00000521399 TNIKQ9UKE5 1360 aa35.18■■■■□ 3.22
SNHG6-205ENST00000521399 TTBK1Q5TCY1 1321 aaPredicted RBP35.15■■■■□ 3.22
SNHG6-205ENST00000521399 RAPGEF2Q9Y4G8 1499 aa35.08■■■■□ 3.21
SNHG6-205ENST00000521399 ABCC2Q92887 1545 aa35.07■■■■□ 3.21
SNHG6-205ENST00000521399 TSPOAP1O95153 1857 aa35.05■■■■□ 3.2
SNHG6-205ENST00000521399 DISP1Q96F81 1524 aa35.05■■■■□ 3.2
SNHG6-205ENST00000521399 UHRF1BP1LA0JNW5 1464 aa35.01■■■■□ 3.19
SNHG6-205ENST00000521399 KDM6BO15054 1643 aa34.99■■■■□ 3.19
SNHG6-205ENST00000521399 UGGT2Q9NYU1 1516 aa34.98■■■■□ 3.19
SNHG6-205ENST00000521399 UACAQ9BZF9 1416 aa34.98■■■■□ 3.19
SNHG6-205ENST00000521399 ASXL2Q76L83 1435 aa34.96■■■■□ 3.19
SNHG6-205ENST00000521399 PLB1Q6P1J6 1458 aa34.96■■■■□ 3.19
SNHG6-205ENST00000521399 GLI2P10070 1586 aa34.88■■■■□ 3.17
SNHG6-205ENST00000521399 KIAA0556O60303 1618 aa34.88■■■■□ 3.17
SNHG6-205ENST00000521399 KDM5BQ9UGL1 1544 aa34.85■■■■□ 3.17
SNHG6-205ENST00000521399 PPRC1Q5VV67 1664 aaKnown RBP34.8■■■■□ 3.16
SNHG6-205ENST00000521399 CTTNBP2Q8WZ74 1663 aa34.78■■■■□ 3.16
SNHG6-205ENST00000521399 ZCCHC11Q5TAX3 1644 aaKnown RBP34.76■■■■□ 3.15
SNHG6-205ENST00000521399 EPRSP07814 1512 aaKnown RBP34.76■■■■□ 3.15
SNHG6-205ENST00000521399 KDM4FA0A1W2PPD8 638 aa34.72■■■■□ 3.15
SNHG6-205ENST00000521399 GOLGA3Q08378 1498 aa34.69■■■■□ 3.14
SNHG6-205ENST00000521399 PRXQ9BXM0 1461 aa34.69■■■■□ 3.14
SNHG6-205ENST00000521399 MAP3K4Q9Y6R4 1608 aa34.68■■■■□ 3.14
SNHG6-205ENST00000521399 WDR7Q9Y4E6 1490 aa34.6■■■■□ 3.13
SNHG6-205ENST00000521399 TEX14Q8IWB6 1497 aa34.59■■■■□ 3.13
SNHG6-205ENST00000521399 COL17A1Q9UMD9 1497 aaPredicted RBP34.58■■■■□ 3.13
SNHG6-205ENST00000521399 ABCA8O94911 1581 aa34.57■■■■□ 3.12
SNHG6-205ENST00000521399 KCNH8Q96L42 1107 aa34.43■■■■□ 3.1
SNHG6-205ENST00000521399 CFAP43Q8NDM7 1665 aa34.41■■■■□ 3.1
SNHG6-205ENST00000521399 CD109Q6YHK3 1445 aa34.41■■■■□ 3.1
SNHG6-205ENST00000521399 CSRNP3Q8WYN3 585 aa34.4■■■■□ 3.1
SNHG6-205ENST00000521399 MAGI3Q5TCQ9 1506 aa34.4■■■■□ 3.1
SNHG6-205ENST00000521399 ADGRL1O94910 1474 aa34.39■■■■□ 3.1
SNHG6-205ENST00000521399 P3H3Q8IVL6 736 aa34.37■■■■□ 3.09
SNHG6-205ENST00000521399 FAM9AQ8IZU1 332 aaPredicted RBP34.37■■■■□ 3.09
SNHG6-205ENST00000521399 SAMD9Q5K651 1589 aa34.29■■■■□ 3.08
SNHG6-205ENST00000521399 ATP10BO94823 1461 aa34.29■■■■□ 3.08
SNHG6-205ENST00000521399 ARID3CA6NKF2 412 aa34.28■■■■□ 3.08
SNHG6-205ENST00000521399 EEA1Q15075 1411 aa34.23■■■■□ 3.07
SNHG6-205ENST00000521399 RAPGEF6Q8TEU7 1601 aa34.18■■■■□ 3.06
SNHG6-205ENST00000521399 ARAP3Q8WWN8 1544 aa34.14■■■■□ 3.06
SNHG6-205ENST00000521399 ABCA9Q8IUA7 1624 aa34.13■■■■□ 3.05
SNHG6-205ENST00000521399 RANGAP1P46060 587 aaPredicted RBP34.08■■■■□ 3.05
SNHG6-205ENST00000521399 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.07■■■■□ 3.04
SNHG6-205ENST00000521399 HNRNPUL2Q1KMD3 747 aaKnown RBP34.07■■■■□ 3.04
SNHG6-205ENST00000521399 PHLDB1Q86UU1 1377 aa34.07■■■■□ 3.04
SNHG6-205ENST00000521399 NUP153P49790 1475 aaKnown RBP34.06■■■■□ 3.04
SNHG6-205ENST00000521399 FHOD3Q2V2M9 1422 aa34.05■■■■□ 3.04
SNHG6-205ENST00000521399 KIF21BO75037 1637 aa34.01■■■■□ 3.03
SNHG6-205ENST00000521399 NEO1Q92859 1461 aa33.97■■■■□ 3.03
SNHG6-205ENST00000521399 HECW2Q9P2P5 1572 aa33.95■■■■□ 3.03
SNHG6-205ENST00000521399 RAPGEF3O95398 923 aa33.92■■■■□ 3.02
SNHG6-205ENST00000521399 EFCAB5A4FU69 1503 aa33.92■■■■□ 3.02
SNHG6-205ENST00000521399 PLEKHD1A6NEE1 506 aa33.9■■■■□ 3.02
SNHG6-205ENST00000521399 FRMPD1Q5SYB0 1578 aa33.82■■■■□ 3
SNHG6-205ENST00000521399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.77■■■■□ 3
SNHG6-205ENST00000521399 ADAMTSL3P82987 1691 aa33.77■■■■□ 3
SNHG6-205ENST00000521399 ILDR1Q86SU0 546 aaPredicted RBP33.75■■■□□ 2.99
SNHG6-205ENST00000521399 AKNAQ7Z591 1439 aa33.73■■■□□ 2.99
SNHG6-205ENST00000521399 FANCAO15360 1455 aa33.73■■■□□ 2.99
SNHG6-205ENST00000521399 DENND4BO75064 1496 aaPredicted RBP33.73■■■□□ 2.99
SNHG6-205ENST00000521399 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
SNHG6-205ENST00000521399 TTC37Q6PGP7 1564 aa33.71■■■□□ 2.99
SNHG6-205ENST00000521399 CFAP74Q9C0B2 1584 aa33.71■■■□□ 2.99
SNHG6-205ENST00000521399 CDK13Q14004 1512 aaKnown RBP33.7■■■□□ 2.99
SNHG6-205ENST00000521399 EHMT2Q96KQ7 1210 aa33.7■■■□□ 2.99
SNHG6-205ENST00000521399 RICTORQ6R327 1708 aa33.7■■■□□ 2.98
SNHG6-205ENST00000521399 PTPRMP28827 1452 aa33.69■■■□□ 2.98
SNHG6-205ENST00000521399 BCORL1Q5H9F3 1711 aa33.67■■■□□ 2.98
SNHG6-205ENST00000521399 CHIC1Q5VXU3 224 aa33.67■■■□□ 2.98
SNHG6-205ENST00000521399 ARID4BQ4LE39 1312 aaPredicted RBP33.67■■■□□ 2.98
SNHG6-205ENST00000521399 ARHGEF40Q8TER5 1519 aa33.65■■■□□ 2.98
SNHG6-205ENST00000521399 FMN1Q68DA7 1419 aa33.63■■■□□ 2.97
SNHG6-205ENST00000521399 ARHGAP35Q9NRY4 1499 aa33.62■■■□□ 2.97
SNHG6-205ENST00000521399 MADDQ8WXG6 1647 aa33.6■■■□□ 2.97
SNHG6-205ENST00000521399 HECW1Q76N89 1606 aa33.58■■■□□ 2.97
SNHG6-205ENST00000521399 ATP1B4Q9UN42 357 aaPredicted RBP33.58■■■□□ 2.97
SNHG6-205ENST00000521399 ZMYM4Q5VZL5 1548 aa33.58■■■□□ 2.97
SNHG6-205ENST00000521399 PLCH2O75038 1416 aa33.57■■■□□ 2.96
SNHG6-205ENST00000521399 CDK11AQ9UQ88 783 aaPredicted RBP33.51■■■□□ 2.95
SNHG6-205ENST00000521399 ZFYVE16Q7Z3T8 1539 aa33.51■■■□□ 2.95
SNHG6-205ENST00000521399 MAGI2Q86UL8 1455 aa33.5■■■□□ 2.95
SNHG6-205ENST00000521399 YEATS2Q9ULM3 1422 aa33.5■■■□□ 2.95
SNHG6-205ENST00000521399 SCAPERQ9BY12 1400 aa33.49■■■□□ 2.95
SNHG6-205ENST00000521399 POGZQ7Z3K3 1410 aa33.46■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms