RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KIF27Q86VH2 1401 aa26.15■■□□□ 1.78
PRKDC-204ENST00000521331 IGF1RP08069 1367 aa26.15■■□□□ 1.78
PRKDC-204ENST00000521331 KIAA0586Q9BVV6 1533 aa26.11■■□□□ 1.77
PRKDC-204ENST00000521331 NPM1P06748 294 aaKnown RBP eCLIP26.1■■□□□ 1.77
PRKDC-204ENST00000521331 CUL7Q14999 1698 aa26.06■■□□□ 1.76
PRKDC-204ENST00000521331 KIF13AQ9H1H9 1805 aa26.03■■□□□ 1.76
PRKDC-204ENST00000521331 ABCC10Q5T3U5 1492 aa26.03■■□□□ 1.76
PRKDC-204ENST00000521331 FAM69CQ0P6D2 419 aa26.02■■□□□ 1.76
PRKDC-204ENST00000521331 MAPKBP1O60336 1514 aa26.02■■□□□ 1.76
PRKDC-204ENST00000521331 CARMIL1Q5VZK9 1371 aa25.98■■□□□ 1.75
PRKDC-204ENST00000521331 ADCY10Q96PN6 1610 aa25.98■■□□□ 1.75
PRKDC-204ENST00000521331 DIP2BQ9P265 1576 aa25.91■■□□□ 1.74
PRKDC-204ENST00000521331 PTPRGP23470 1445 aa25.9■■□□□ 1.74
PRKDC-204ENST00000521331 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
PRKDC-204ENST00000521331 TNIKQ9UKE5 1360 aa25.85■■□□□ 1.73
PRKDC-204ENST00000521331 IQGAP2Q13576 1575 aa25.81■■□□□ 1.72
PRKDC-204ENST00000521331 TTBK1Q5TCY1 1321 aaPredicted RBP25.79■■□□□ 1.72
PRKDC-204ENST00000521331 ABCC2Q92887 1545 aa25.78■■□□□ 1.72
PRKDC-204ENST00000521331 KDM6BO15054 1643 aa25.72■■□□□ 1.71
PRKDC-204ENST00000521331 UHRF1BP1LA0JNW5 1464 aa25.72■■□□□ 1.71
PRKDC-204ENST00000521331 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
PRKDC-204ENST00000521331 PLB1Q6P1J6 1458 aa25.71■■□□□ 1.71
PRKDC-204ENST00000521331 DISP1Q96F81 1524 aa25.7■■□□□ 1.7
PRKDC-204ENST00000521331 ASXL2Q76L83 1435 aa25.7■■□□□ 1.7
PRKDC-204ENST00000521331 UACAQ9BZF9 1416 aa25.7■■□□□ 1.7
PRKDC-204ENST00000521331 UGGT2Q9NYU1 1516 aa25.66■■□□□ 1.7
PRKDC-204ENST00000521331 TSPOAP1O95153 1857 aa25.64■■□□□ 1.69
PRKDC-204ENST00000521331 GLI2P10070 1586 aa25.63■■□□□ 1.69
PRKDC-204ENST00000521331 KDM5BQ9UGL1 1544 aa25.59■■□□□ 1.69
PRKDC-204ENST00000521331 KIAA0556O60303 1618 aa25.56■■□□□ 1.68
PRKDC-204ENST00000521331 KDM4FA0A1W2PPD8 638 aa25.55■■□□□ 1.68
PRKDC-204ENST00000521331 EPRSP07814 1512 aaKnown RBP25.53■■□□□ 1.68
PRKDC-204ENST00000521331 PPRC1Q5VV67 1664 aaKnown RBP25.5■■□□□ 1.67
PRKDC-204ENST00000521331 GOLGA3Q08378 1498 aa25.47■■□□□ 1.67
PRKDC-204ENST00000521331 ZCCHC11Q5TAX3 1644 aaKnown RBP25.47■■□□□ 1.67
PRKDC-204ENST00000521331 TEX14Q8IWB6 1497 aa25.46■■□□□ 1.67
PRKDC-204ENST00000521331 MAP3K4Q9Y6R4 1608 aa25.44■■□□□ 1.66
PRKDC-204ENST00000521331 WDR7Q9Y4E6 1490 aa25.43■■□□□ 1.66
PRKDC-204ENST00000521331 PRXQ9BXM0 1461 aa25.41■■□□□ 1.66
PRKDC-204ENST00000521331 CTTNBP2Q8WZ74 1663 aa25.41■■□□□ 1.66
PRKDC-204ENST00000521331 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
PRKDC-204ENST00000521331 ABCA8O94911 1581 aa25.35■■□□□ 1.65
PRKDC-204ENST00000521331 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
PRKDC-204ENST00000521331 ADGRL1O94910 1474 aa25.31■■□□□ 1.64
PRKDC-204ENST00000521331 CD109Q6YHK3 1445 aa25.29■■□□□ 1.64
PRKDC-204ENST00000521331 MAGI3Q5TCQ9 1506 aa25.28■■□□□ 1.64
PRKDC-204ENST00000521331 KCNH8Q96L42 1107 aa25.28■■□□□ 1.64
PRKDC-204ENST00000521331 CFAP43Q8NDM7 1665 aa25.23■■□□□ 1.63
PRKDC-204ENST00000521331 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
PRKDC-204ENST00000521331 P3H3Q8IVL6 736 aa25.18■■□□□ 1.62
PRKDC-204ENST00000521331 ATP10BO94823 1461 aa25.15■■□□□ 1.62
PRKDC-204ENST00000521331 ARID3CA6NKF2 412 aa25.13■■□□□ 1.61
PRKDC-204ENST00000521331 SAMD9Q5K651 1589 aa25.1■■□□□ 1.61
PRKDC-204ENST00000521331 EEA1Q15075 1411 aa25.09■■□□□ 1.61
PRKDC-204ENST00000521331 ARAP3Q8WWN8 1544 aa25.08■■□□□ 1.61
PRKDC-204ENST00000521331 PHLDB1Q86UU1 1377 aa25.07■■□□□ 1.6
PRKDC-204ENST00000521331 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
PRKDC-204ENST00000521331 RAPGEF6Q8TEU7 1601 aa25.03■■□□□ 1.6
PRKDC-204ENST00000521331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.01■■□□□ 1.59
PRKDC-204ENST00000521331 HNRNPUL2Q1KMD3 747 aaKnown RBP25.01■■□□□ 1.59
PRKDC-204ENST00000521331 HECW2Q9P2P5 1572 aa24.98■■□□□ 1.59
PRKDC-204ENST00000521331 NEO1Q92859 1461 aa24.97■■□□□ 1.59
PRKDC-204ENST00000521331 NUP153P49790 1475 aaKnown RBP24.96■■□□□ 1.59
PRKDC-204ENST00000521331 RANGAP1P46060 587 aaPredicted RBP24.95■■□□□ 1.58
PRKDC-204ENST00000521331 FHOD3Q2V2M9 1422 aa24.95■■□□□ 1.58
PRKDC-204ENST00000521331 KIF21BO75037 1637 aa24.94■■□□□ 1.58
PRKDC-204ENST00000521331 RAPGEF3O95398 923 aa24.92■■□□□ 1.58
PRKDC-204ENST00000521331 ILDR1Q86SU0 546 aaPredicted RBP24.91■■□□□ 1.58
PRKDC-204ENST00000521331 PLEKHD1A6NEE1 506 aa24.9■■□□□ 1.58
PRKDC-204ENST00000521331 EFCAB5A4FU69 1503 aa24.86■■□□□ 1.57
PRKDC-204ENST00000521331 FRMPD1Q5SYB0 1578 aa24.8■■□□□ 1.56
PRKDC-204ENST00000521331 PTPRMP28827 1452 aa24.79■■□□□ 1.56
PRKDC-204ENST00000521331 DENND4BO75064 1496 aaPredicted RBP24.78■■□□□ 1.56
PRKDC-204ENST00000521331 ARID4BQ4LE39 1312 aaPredicted RBP24.78■■□□□ 1.56
PRKDC-204ENST00000521331 ADAMTSL3P82987 1691 aa24.78■■□□□ 1.56
PRKDC-204ENST00000521331 AKNAQ7Z591 1439 aa24.78■■□□□ 1.56
PRKDC-204ENST00000521331 FANCAO15360 1455 aa24.77■■□□□ 1.56
PRKDC-204ENST00000521331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.75■■□□□ 1.55
PRKDC-204ENST00000521331 CFAP74Q9C0B2 1584 aa24.74■■□□□ 1.55
PRKDC-204ENST00000521331 ARHGEF40Q8TER5 1519 aa24.72■■□□□ 1.55
PRKDC-204ENST00000521331 BCORL1Q5H9F3 1711 aa24.71■■□□□ 1.55
PRKDC-204ENST00000521331 TTC37Q6PGP7 1564 aa24.69■■□□□ 1.54
PRKDC-204ENST00000521331 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
PRKDC-204ENST00000521331 CDK13Q14004 1512 aaKnown RBP24.69■■□□□ 1.54
PRKDC-204ENST00000521331 FMN1Q68DA7 1419 aa24.68■■□□□ 1.54
PRKDC-204ENST00000521331 RICTORQ6R327 1708 aa24.67■■□□□ 1.54
PRKDC-204ENST00000521331 ZMYM4Q5VZL5 1548 aa24.66■■□□□ 1.54
PRKDC-204ENST00000521331 MADDQ8WXG6 1647 aa24.65■■□□□ 1.54
PRKDC-204ENST00000521331 MAGI2Q86UL8 1455 aa24.64■■□□□ 1.54
PRKDC-204ENST00000521331 POGZQ7Z3K3 1410 aa24.64■■□□□ 1.54
PRKDC-204ENST00000521331 PLCH2O75038 1416 aa24.63■■□□□ 1.53
PRKDC-204ENST00000521331 EHMT2Q96KQ7 1210 aa24.62■■□□□ 1.53
PRKDC-204ENST00000521331 CDK11AQ9UQ88 783 aaPredicted RBP24.62■■□□□ 1.53
PRKDC-204ENST00000521331 ZFYVE16Q7Z3T8 1539 aa24.61■■□□□ 1.53
PRKDC-204ENST00000521331 ATP1B4Q9UN42 357 aaPredicted RBP24.61■■□□□ 1.53
PRKDC-204ENST00000521331 HECW1Q76N89 1606 aa24.61■■□□□ 1.53
PRKDC-204ENST00000521331 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
PRKDC-204ENST00000521331 SCAPERQ9BY12 1400 aa24.6■■□□□ 1.53
PRKDC-204ENST00000521331 YEATS2Q9ULM3 1422 aa24.59■■□□□ 1.53
PRKDC-204ENST00000521331 PCF11O94913 1555 aaKnown RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms