RNA–Protein interactions for RNA: ENST00000521175.1

MCPH1-205, Transcript of microcephalin 1, humanhuman

TSL 3

Gene MCPH1, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-205ENST00000521175 MSH5O43196 834 aa22.02■■□□□ 1.12
MCPH1-205ENST00000521175 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
MCPH1-205ENST00000521175 ERICH3Q5RHP9 1530 aa22.01■■□□□ 1.11
MCPH1-205ENST00000521175 NUP160Q12769 1436 aa21.98■■□□□ 1.11
MCPH1-205ENST00000521175 ERCC6L2Q5T890 1561 aa21.98■■□□□ 1.11
MCPH1-205ENST00000521175 SHROOM2Q13796 1616 aa21.89■■□□□ 1.09
MCPH1-205ENST00000521175 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
MCPH1-205ENST00000521175 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
MCPH1-205ENST00000521175 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
MCPH1-205ENST00000521175 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
MCPH1-205ENST00000521175 KIF27Q86VH2 1401 aa21.78■■□□□ 1.08
MCPH1-205ENST00000521175 CUL7Q14999 1698 aa21.74■■□□□ 1.07
MCPH1-205ENST00000521175 IGF1RP08069 1367 aa21.71■■□□□ 1.07
MCPH1-205ENST00000521175 KCNA4P22459 653 aa21.66■■□□□ 1.06
MCPH1-205ENST00000521175 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.05
MCPH1-205ENST00000521175 CARMIL1Q5VZK9 1371 aa21.61■■□□□ 1.05
MCPH1-205ENST00000521175 KIF13AQ9H1H9 1805 aa21.61■■□□□ 1.05
MCPH1-205ENST00000521175 NPM1P06748 294 aaKnown RBP eCLIP21.58■■□□□ 1.05
MCPH1-205ENST00000521175 TTBK1Q5TCY1 1321 aaPredicted RBP21.56■■□□□ 1.04
MCPH1-205ENST00000521175 ADCY10Q96PN6 1610 aa21.56■■□□□ 1.04
MCPH1-205ENST00000521175 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
MCPH1-205ENST00000521175 FAM69CQ0P6D2 419 aa21.49■■□□□ 1.03
MCPH1-205ENST00000521175 MAPKBP1O60336 1514 aa21.49■■□□□ 1.03
MCPH1-205ENST00000521175 ABCC10Q5T3U5 1492 aa21.47■■□□□ 1.03
MCPH1-205ENST00000521175 PTPRGP23470 1445 aa21.46■■□□□ 1.03
MCPH1-205ENST00000521175 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
MCPH1-205ENST00000521175 DIP2BQ9P265 1576 aa21.45■■□□□ 1.02
MCPH1-205ENST00000521175 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
MCPH1-205ENST00000521175 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
MCPH1-205ENST00000521175 TSPOAP1O95153 1857 aa21.39■■□□□ 1.02
MCPH1-205ENST00000521175 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
MCPH1-205ENST00000521175 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
MCPH1-205ENST00000521175 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
MCPH1-205ENST00000521175 CTTNBP2Q8WZ74 1663 aa21.31■■□□□ 1
MCPH1-205ENST00000521175 UGGT2Q9NYU1 1516 aa21.31■■□□□ 1
MCPH1-205ENST00000521175 NCBP3Q53F19 620 aaKnown RBP21.31■■□□□ 1
MCPH1-205ENST00000521175 UACAQ9BZF9 1416 aa21.3■■□□□ 1
MCPH1-205ENST00000521175 KIAA0556O60303 1618 aa21.3■■□□□ 1
MCPH1-205ENST00000521175 KDM6BO15054 1643 aa21.29■■□□□ 1
MCPH1-205ENST00000521175 ASXL2Q76L83 1435 aa21.28■■□□□ 1
MCPH1-205ENST00000521175 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
MCPH1-205ENST00000521175 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
MCPH1-205ENST00000521175 ZCCHC11Q5TAX3 1644 aaKnown RBP21.22■□□□□ 0.99
MCPH1-205ENST00000521175 KDM5BQ9UGL1 1544 aa21.19■□□□□ 0.98
MCPH1-205ENST00000521175 GLI2P10070 1586 aa21.18■□□□□ 0.98
MCPH1-205ENST00000521175 GOLGA3Q08378 1498 aa21.17■□□□□ 0.98
MCPH1-205ENST00000521175 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
MCPH1-205ENST00000521175 PPRC1Q5VV67 1664 aaKnown RBP21.16■□□□□ 0.98
MCPH1-205ENST00000521175 EPRSP07814 1512 aaKnown RBP21.14■□□□□ 0.97
MCPH1-205ENST00000521175 CNKSR2Q8WXI2 1034 aa21.12■□□□□ 0.97
MCPH1-205ENST00000521175 MAP3K4Q9Y6R4 1608 aa21.1■□□□□ 0.97
MCPH1-205ENST00000521175 WDR7Q9Y4E6 1490 aa21.07■□□□□ 0.96
MCPH1-205ENST00000521175 ABCA8O94911 1581 aa21.07■□□□□ 0.96
MCPH1-205ENST00000521175 MAPK8IP2Q13387 824 aaPredicted RBP21.07■□□□□ 0.96
MCPH1-205ENST00000521175 P3H3Q8IVL6 736 aa21.06■□□□□ 0.96
MCPH1-205ENST00000521175 CSRNP3Q8WYN3 585 aa21.04■□□□□ 0.96
MCPH1-205ENST00000521175 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
MCPH1-205ENST00000521175 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
MCPH1-205ENST00000521175 KCNH8Q96L42 1107 aa21.02■□□□□ 0.96
MCPH1-205ENST00000521175 NPM3O75607 178 aaKnown RBP21.01■□□□□ 0.95
MCPH1-205ENST00000521175 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
MCPH1-205ENST00000521175 KDM4FA0A1W2PPD8 638 aa20.99■□□□□ 0.95
MCPH1-205ENST00000521175 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
MCPH1-205ENST00000521175 COL17A1Q9UMD9 1497 aaPredicted RBP20.98■□□□□ 0.95
MCPH1-205ENST00000521175 CFAP43Q8NDM7 1665 aa20.96■□□□□ 0.95
MCPH1-205ENST00000521175 EEA1Q15075 1411 aa20.95■□□□□ 0.94
MCPH1-205ENST00000521175 CD109Q6YHK3 1445 aa20.95■□□□□ 0.94
MCPH1-205ENST00000521175 SAMD9Q5K651 1589 aa20.94■□□□□ 0.94
MCPH1-205ENST00000521175 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
MCPH1-205ENST00000521175 ATP10BO94823 1461 aa20.89■□□□□ 0.94
MCPH1-205ENST00000521175 ADGRL1O94910 1474 aa20.89■□□□□ 0.94
MCPH1-205ENST00000521175 MAGI3Q5TCQ9 1506 aa20.88■□□□□ 0.93
MCPH1-205ENST00000521175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
MCPH1-205ENST00000521175 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
MCPH1-205ENST00000521175 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
MCPH1-205ENST00000521175 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
MCPH1-205ENST00000521175 KIF21BO75037 1637 aa20.82■□□□□ 0.92
MCPH1-205ENST00000521175 ABCA9Q8IUA7 1624 aa20.79■□□□□ 0.92
MCPH1-205ENST00000521175 NUP153P49790 1475 aaKnown RBP20.78■□□□□ 0.92
MCPH1-205ENST00000521175 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
MCPH1-205ENST00000521175 DMRT2Q9Y5R5 561 aa20.75■□□□□ 0.91
MCPH1-205ENST00000521175 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
MCPH1-205ENST00000521175 ARAP3Q8WWN8 1544 aa20.71■□□□□ 0.91
MCPH1-205ENST00000521175 PLEKHD1A6NEE1 506 aa20.68■□□□□ 0.9
MCPH1-205ENST00000521175 SLC4A1APQ9BWU0 796 aaKnown RBP20.68■□□□□ 0.9
MCPH1-205ENST00000521175 PHLDB1Q86UU1 1377 aa20.66■□□□□ 0.9
MCPH1-205ENST00000521175 NEO1Q92859 1461 aa20.66■□□□□ 0.9
MCPH1-205ENST00000521175 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
MCPH1-205ENST00000521175 ATP1B4Q9UN42 357 aaPredicted RBP20.65■□□□□ 0.9
MCPH1-205ENST00000521175 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
MCPH1-205ENST00000521175 RNF216Q9NWF9 866 aaPredicted RBP20.63■□□□□ 0.89
MCPH1-205ENST00000521175 FRMPD1Q5SYB0 1578 aa20.6■□□□□ 0.89
MCPH1-205ENST00000521175 HECW2Q9P2P5 1572 aa20.6■□□□□ 0.89
MCPH1-205ENST00000521175 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.6■□□□□ 0.89
MCPH1-205ENST00000521175 TTC37Q6PGP7 1564 aa20.59■□□□□ 0.89
MCPH1-205ENST00000521175 CFAP74Q9C0B2 1584 aa20.58■□□□□ 0.88
MCPH1-205ENST00000521175 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
MCPH1-205ENST00000521175 HECW1Q76N89 1606 aa20.57■□□□□ 0.88
MCPH1-205ENST00000521175 FANCAO15360 1455 aa20.56■□□□□ 0.88
MCPH1-205ENST00000521175 FMN1Q68DA7 1419 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms