RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
TRAPPC9-209ENST00000521167 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.47
TRAPPC9-209ENST00000521167 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
TRAPPC9-209ENST00000521167 FHAD1B1AJZ9 1412 aa17.94■□□□□ 0.46
TRAPPC9-209ENST00000521167 ADAMTS12P58397 1594 aa17.94■□□□□ 0.46
TRAPPC9-209ENST00000521167 GRIN2AQ12879 1464 aa17.92■□□□□ 0.46
TRAPPC9-209ENST00000521167 KIF27Q86VH2 1401 aa17.88■□□□□ 0.45
TRAPPC9-209ENST00000521167 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
TRAPPC9-209ENST00000521167 NUP160Q12769 1436 aa17.85■□□□□ 0.45
TRAPPC9-209ENST00000521167 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
TRAPPC9-209ENST00000521167 IGF1RP08069 1367 aa17.83■□□□□ 0.45
TRAPPC9-209ENST00000521167 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
TRAPPC9-209ENST00000521167 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
TRAPPC9-209ENST00000521167 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
TRAPPC9-209ENST00000521167 CUL7Q14999 1698 aa17.79■□□□□ 0.44
TRAPPC9-209ENST00000521167 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
TRAPPC9-209ENST00000521167 CARMIL1Q5VZK9 1371 aa17.72■□□□□ 0.43
TRAPPC9-209ENST00000521167 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
TRAPPC9-209ENST00000521167 ERCC6L2Q5T890 1561 aa17.67■□□□□ 0.42
TRAPPC9-209ENST00000521167 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
TRAPPC9-209ENST00000521167 KIAA0586Q9BVV6 1533 aa17.67■□□□□ 0.42
TRAPPC9-209ENST00000521167 PRG4Q92954 1404 aaPredicted RBP17.64■□□□□ 0.42
TRAPPC9-209ENST00000521167 RAPGEF2Q9Y4G8 1499 aa17.6■□□□□ 0.41
TRAPPC9-209ENST00000521167 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
TRAPPC9-209ENST00000521167 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
TRAPPC9-209ENST00000521167 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC9-209ENST00000521167 IQGAP2Q13576 1575 aa17.52■□□□□ 0.39
TRAPPC9-209ENST00000521167 CARMIL2Q6F5E8 1435 aa17.49■□□□□ 0.39
TRAPPC9-209ENST00000521167 PRXQ9BXM0 1461 aa17.49■□□□□ 0.39
TRAPPC9-209ENST00000521167 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
TRAPPC9-209ENST00000521167 EEA1Q15075 1411 aa17.46■□□□□ 0.39
TRAPPC9-209ENST00000521167 CTTNBP2Q8WZ74 1663 aa17.45■□□□□ 0.38
TRAPPC9-209ENST00000521167 UGGT2Q9NYU1 1516 aa17.44■□□□□ 0.38
TRAPPC9-209ENST00000521167 PTPRGP23470 1445 aa17.44■□□□□ 0.38
TRAPPC9-209ENST00000521167 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
TRAPPC9-209ENST00000521167 KCNA4P22459 653 aa17.43■□□□□ 0.38
TRAPPC9-209ENST00000521167 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRAPPC9-209ENST00000521167 DISP1Q96F81 1524 aa17.4■□□□□ 0.38
TRAPPC9-209ENST00000521167 ADCY10Q96PN6 1610 aa17.39■□□□□ 0.37
TRAPPC9-209ENST00000521167 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
TRAPPC9-209ENST00000521167 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
TRAPPC9-209ENST00000521167 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-209ENST00000521167 MAPKBP1O60336 1514 aa17.33■□□□□ 0.37
TRAPPC9-209ENST00000521167 KIF13AQ9H1H9 1805 aa17.32■□□□□ 0.36
TRAPPC9-209ENST00000521167 UHRF1BP1LA0JNW5 1464 aa17.31■□□□□ 0.36
TRAPPC9-209ENST00000521167 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-209ENST00000521167 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
TRAPPC9-209ENST00000521167 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
TRAPPC9-209ENST00000521167 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
TRAPPC9-209ENST00000521167 KIF21BO75037 1637 aa17.27■□□□□ 0.36
TRAPPC9-209ENST00000521167 FAM69CQ0P6D2 419 aa17.25■□□□□ 0.35
TRAPPC9-209ENST00000521167 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
TRAPPC9-209ENST00000521167 KDM5BQ9UGL1 1544 aa17.22■□□□□ 0.35
TRAPPC9-209ENST00000521167 DIP2BQ9P265 1576 aa17.22■□□□□ 0.35
TRAPPC9-209ENST00000521167 PLB1Q6P1J6 1458 aa17.21■□□□□ 0.35
TRAPPC9-209ENST00000521167 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
TRAPPC9-209ENST00000521167 ABCA8O94911 1581 aa17.19■□□□□ 0.34
TRAPPC9-209ENST00000521167 ASXL2Q76L83 1435 aa17.18■□□□□ 0.34
TRAPPC9-209ENST00000521167 P3H3Q8IVL6 736 aa17.17■□□□□ 0.34
TRAPPC9-209ENST00000521167 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-209ENST00000521167 GLI2P10070 1586 aa17.14■□□□□ 0.33
TRAPPC9-209ENST00000521167 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
TRAPPC9-209ENST00000521167 TSPOAP1O95153 1857 aa17.13■□□□□ 0.33
TRAPPC9-209ENST00000521167 EFCAB5A4FU69 1503 aa17.11■□□□□ 0.33
TRAPPC9-209ENST00000521167 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-209ENST00000521167 EPRSP07814 1512 aaKnown RBP17.09■□□□□ 0.33
TRAPPC9-209ENST00000521167 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-209ENST00000521167 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
TRAPPC9-209ENST00000521167 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
TRAPPC9-209ENST00000521167 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
TRAPPC9-209ENST00000521167 FHOD3Q2V2M9 1422 aa17.05■□□□□ 0.32
TRAPPC9-209ENST00000521167 ATP10BO94823 1461 aa17.05■□□□□ 0.32
TRAPPC9-209ENST00000521167 MAP3K4Q9Y6R4 1608 aa17.03■□□□□ 0.32
TRAPPC9-209ENST00000521167 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-209ENST00000521167 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
TRAPPC9-209ENST00000521167 KCNH8Q96L42 1107 aa17■□□□□ 0.31
TRAPPC9-209ENST00000521167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
TRAPPC9-209ENST00000521167 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
TRAPPC9-209ENST00000521167 KDM6BO15054 1643 aa16.99■□□□□ 0.31
TRAPPC9-209ENST00000521167 NUP153P49790 1475 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-209ENST00000521167 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
TRAPPC9-209ENST00000521167 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
TRAPPC9-209ENST00000521167 ARHGAP35Q9NRY4 1499 aa16.97■□□□□ 0.31
TRAPPC9-209ENST00000521167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-209ENST00000521167 HNRNPUL2Q1KMD3 747 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-209ENST00000521167 FMN1Q68DA7 1419 aa16.96■□□□□ 0.3
TRAPPC9-209ENST00000521167 CD109Q6YHK3 1445 aa16.95■□□□□ 0.3
TRAPPC9-209ENST00000521167 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
TRAPPC9-209ENST00000521167 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
TRAPPC9-209ENST00000521167 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
TRAPPC9-209ENST00000521167 HECW1Q76N89 1606 aa16.87■□□□□ 0.29
TRAPPC9-209ENST00000521167 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-209ENST00000521167 ATP1B4Q9UN42 357 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-209ENST00000521167 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
TRAPPC9-209ENST00000521167 CDK11AQ9UQ88 783 aaPredicted RBP16.84■□□□□ 0.29
TRAPPC9-209ENST00000521167 CLIP1P30622 1438 aa16.83■□□□□ 0.28
TRAPPC9-209ENST00000521167 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
TRAPPC9-209ENST00000521167 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
TRAPPC9-209ENST00000521167 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
TRAPPC9-209ENST00000521167 NEO1Q92859 1461 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms