RNA–Protein interactions for RNA: ENST00000520668.1

CDH12-205, Transcript of cadherin 12, humanhuman

TSL 4

Gene CDH12, Length 539 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-205ENST00000520668 CECR2Q9BXF3 1484 aa12.79□□□□□ -0.36
CDH12-205ENST00000520668 SPOCK2Q92563 424 aa12.76□□□□□ -0.37
CDH12-205ENST00000520668 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
CDH12-205ENST00000520668 NPM1P06748 294 aaKnown RBP eCLIP12.72□□□□□ -0.37
CDH12-205ENST00000520668 NUBP1P53384 320 aa12.71□□□□□ -0.37
CDH12-205ENST00000520668 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
CDH12-205ENST00000520668 RASEFQ8IZ41 740 aa12.64□□□□□ -0.39
CDH12-205ENST00000520668 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
CDH12-205ENST00000520668 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
CDH12-205ENST00000520668 POTEHQ6S545 545 aa12.63□□□□□ -0.39
CDH12-205ENST00000520668 AMER1Q5JTC6 1135 aaPredicted RBP12.62□□□□□ -0.39
CDH12-205ENST00000520668 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
CDH12-205ENST00000520668 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
CDH12-205ENST00000520668 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
CDH12-205ENST00000520668 CIZ1Q9ULV3 898 aaPredicted RBP12.57□□□□□ -0.4
CDH12-205ENST00000520668 NCAPD3P42695 1498 aa12.57□□□□□ -0.4
CDH12-205ENST00000520668 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
CDH12-205ENST00000520668 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
CDH12-205ENST00000520668 WIZO95785 1651 aa12.56□□□□□ -0.4
CDH12-205ENST00000520668 PKD2Q13563 968 aa12.55□□□□□ -0.4
CDH12-205ENST00000520668 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
CDH12-205ENST00000520668 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
CDH12-205ENST00000520668 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
CDH12-205ENST00000520668 CD44P16070 742 aaKnown RBP12.53□□□□□ -0.4
CDH12-205ENST00000520668 GSE1Q14687 1217 aa12.53□□□□□ -0.4
CDH12-205ENST00000520668 HAX1O00165 279 aa12.5□□□□□ -0.41
CDH12-205ENST00000520668 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
CDH12-205ENST00000520668 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
CDH12-205ENST00000520668 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
CDH12-205ENST00000520668 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
CDH12-205ENST00000520668 EVX2Q03828 476 aa12.46□□□□□ -0.41
CDH12-205ENST00000520668 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
CDH12-205ENST00000520668 ECM2O94769 699 aaPredicted RBP12.43□□□□□ -0.42
CDH12-205ENST00000520668 PYGBP11216 843 aa12.42□□□□□ -0.42
CDH12-205ENST00000520668 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
CDH12-205ENST00000520668 NESP48681 1621 aa12.38□□□□□ -0.43
CDH12-205ENST00000520668 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
CDH12-205ENST00000520668 PHF12Q96QT6 1004 aa12.37□□□□□ -0.43
CDH12-205ENST00000520668 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
CDH12-205ENST00000520668 RGL2O15211 777 aa12.34□□□□□ -0.43
CDH12-205ENST00000520668 KIF12Q96FN5 646 aa12.34□□□□□ -0.43
CDH12-205ENST00000520668 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
CDH12-205ENST00000520668 MAP3K13O43283 966 aa12.31□□□□□ -0.44
CDH12-205ENST00000520668 RNF25Q96BH1 459 aaPredicted RBP12.31□□□□□ -0.44
CDH12-205ENST00000520668 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
CDH12-205ENST00000520668 PCDHB13Q9Y5F0 798 aa12.26□□□□□ -0.45
CDH12-205ENST00000520668 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
CDH12-205ENST00000520668 SGIP1Q9BQI5 828 aa12.25□□□□□ -0.45
CDH12-205ENST00000520668 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
CDH12-205ENST00000520668 PCDHB8Q9UN66 801 aa12.24□□□□□ -0.45
CDH12-205ENST00000520668 RIOK3O14730 519 aaKnown RBP12.23□□□□□ -0.45
CDH12-205ENST00000520668 MS4A3Q96HJ5 214 aa12.23□□□□□ -0.45
CDH12-205ENST00000520668 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
CDH12-205ENST00000520668 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
CDH12-205ENST00000520668 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
CDH12-205ENST00000520668 CCDC88BA6NC98 1476 aa12.19□□□□□ -0.46
CDH12-205ENST00000520668 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
CDH12-205ENST00000520668 GABBR2O75899 941 aa12.18□□□□□ -0.46
CDH12-205ENST00000520668 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CDH12-205ENST00000520668 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CDH12-205ENST00000520668 CLCN6P51797 869 aa12.17□□□□□ -0.46
CDH12-205ENST00000520668 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
CDH12-205ENST00000520668 TRPC6Q9Y210 931 aa12.16□□□□□ -0.46
CDH12-205ENST00000520668 VGFO15240 615 aaPredicted RBP12.15□□□□□ -0.46
CDH12-205ENST00000520668 CFTRP13569 1480 aa12.14□□□□□ -0.47
CDH12-205ENST00000520668 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
CDH12-205ENST00000520668 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
CDH12-205ENST00000520668 PSEN1P49768 467 aa12.11□□□□□ -0.47
CDH12-205ENST00000520668 PDAP1Q13442 181 aaKnown RBP12.11□□□□□ -0.47
CDH12-205ENST00000520668 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
CDH12-205ENST00000520668 PDS5BQ9NTI5 1447 aa12.09□□□□□ -0.47
CDH12-205ENST00000520668 CHGAP10645 457 aaKnown RBP12.08□□□□□ -0.48
CDH12-205ENST00000520668 CUX2O14529 1486 aa12.08□□□□□ -0.48
CDH12-205ENST00000520668 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.48
CDH12-205ENST00000520668 SUPT5HO00267 1087 aaKnown RBP12.06□□□□□ -0.48
CDH12-205ENST00000520668 STK25O00506 426 aa12.05□□□□□ -0.48
CDH12-205ENST00000520668 WDR62O43379 1518 aa12.05□□□□□ -0.48
CDH12-205ENST00000520668 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
CDH12-205ENST00000520668 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
CDH12-205ENST00000520668 TIE1P35590 1138 aa12.04□□□□□ -0.48
CDH12-205ENST00000520668 HS6ST3Q8IZP7 471 aa12.04□□□□□ -0.48
CDH12-205ENST00000520668 BCL11BQ9C0K0 894 aaPredicted RBP12.04□□□□□ -0.48
CDH12-205ENST00000520668 BMP2KQ9NSY1 1161 aaPredicted RBP12.04□□□□□ -0.48
CDH12-205ENST00000520668 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
CDH12-205ENST00000520668 URB2Q14146 1524 aaKnown RBP12.02□□□□□ -0.48
CDH12-205ENST00000520668 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
CDH12-205ENST00000520668 STK24Q9Y6E0 443 aa12.02□□□□□ -0.49
CDH12-205ENST00000520668 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
CDH12-205ENST00000520668 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
CDH12-205ENST00000520668 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
CDH12-205ENST00000520668 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
CDH12-205ENST00000520668 CABP2Q9NPB3 220 aa11.97□□□□□ -0.49
CDH12-205ENST00000520668 POTEIP0CG38 1075 aa11.96□□□□□ -0.49
CDH12-205ENST00000520668 DNAJC5Q9H3Z4 198 aa11.94□□□□□ -0.5
CDH12-205ENST00000520668 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
CDH12-205ENST00000520668 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
CDH12-205ENST00000520668 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
CDH12-205ENST00000520668 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
CDH12-205ENST00000520668 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
CDH12-205ENST00000520668 PELP1Q8IZL8 1130 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms