RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 BIVM-ERCC5R4GMW8 1640 aa10.13□□□□□ -0.79
CTNNA1-219ENST00000520158 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
CTNNA1-219ENST00000520158 GRIN2AQ12879 1464 aa10.08□□□□□ -0.8
CTNNA1-219ENST00000520158 NUP160Q12769 1436 aa10.07□□□□□ -0.8
CTNNA1-219ENST00000520158 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
CTNNA1-219ENST00000520158 FHAD1B1AJZ9 1412 aa10.07□□□□□ -0.8
CTNNA1-219ENST00000520158 SCAF1Q9H7N4 1312 aaKnown RBP10.06□□□□□ -0.8
CTNNA1-219ENST00000520158 ADAMTS12P58397 1594 aa10.05□□□□□ -0.8
CTNNA1-219ENST00000520158 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
CTNNA1-219ENST00000520158 CEP170Q5SW79 1584 aa10.03□□□□□ -0.8
CTNNA1-219ENST00000520158 SHROOM2Q13796 1616 aa10.03□□□□□ -0.8
CTNNA1-219ENST00000520158 ERCC6L2Q5T890 1561 aa9.99□□□□□ -0.81
CTNNA1-219ENST00000520158 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
CTNNA1-219ENST00000520158 IGF1RP08069 1367 aa9.95□□□□□ -0.82
CTNNA1-219ENST00000520158 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-219ENST00000520158 KIF27Q86VH2 1401 aa9.92□□□□□ -0.82
CTNNA1-219ENST00000520158 KIAA0586Q9BVV6 1533 aa9.92□□□□□ -0.82
CTNNA1-219ENST00000520158 C1QBPQ07021 282 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-219ENST00000520158 RUSC2Q8N2Y8 1516 aa9.91□□□□□ -0.82
CTNNA1-219ENST00000520158 DCAF8L1A6NGE4 600 aa9.9□□□□□ -0.82
CTNNA1-219ENST00000520158 CUL7Q14999 1698 aa9.9□□□□□ -0.83
CTNNA1-219ENST00000520158 POTEHQ6S545 545 aa9.86□□□□□ -0.83
CTNNA1-219ENST00000520158 KIF13AQ9H1H9 1805 aa9.86□□□□□ -0.83
CTNNA1-219ENST00000520158 CARMIL1Q5VZK9 1371 aa9.86□□□□□ -0.83
CTNNA1-219ENST00000520158 MAPKBP1O60336 1514 aa9.85□□□□□ -0.83
CTNNA1-219ENST00000520158 ABCC10Q5T3U5 1492 aa9.84□□□□□ -0.83
CTNNA1-219ENST00000520158 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
CTNNA1-219ENST00000520158 ADCY10Q96PN6 1610 aa9.82□□□□□ -0.84
CTNNA1-219ENST00000520158 HOXD11P31277 338 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-219ENST00000520158 PTPRGP23470 1445 aa9.8□□□□□ -0.84
CTNNA1-219ENST00000520158 TNIKQ9UKE5 1360 aa9.79□□□□□ -0.84
CTNNA1-219ENST00000520158 FAM69CQ0P6D2 419 aa9.79□□□□□ -0.84
CTNNA1-219ENST00000520158 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
CTNNA1-219ENST00000520158 IQGAP2Q13576 1575 aa9.78□□□□□ -0.84
CTNNA1-219ENST00000520158 DIP2BQ9P265 1576 aa9.78□□□□□ -0.84
CTNNA1-219ENST00000520158 UHRF1BP1LA0JNW5 1464 aa9.77□□□□□ -0.85
CTNNA1-219ENST00000520158 RAPGEF2Q9Y4G8 1499 aa9.77□□□□□ -0.85
CTNNA1-219ENST00000520158 DISP1Q96F81 1524 aa9.76□□□□□ -0.85
CTNNA1-219ENST00000520158 ABCC2Q92887 1545 aa9.75□□□□□ -0.85
CTNNA1-219ENST00000520158 UGGT2Q9NYU1 1516 aa9.75□□□□□ -0.85
CTNNA1-219ENST00000520158 UACAQ9BZF9 1416 aa9.73□□□□□ -0.85
CTNNA1-219ENST00000520158 PLB1Q6P1J6 1458 aa9.72□□□□□ -0.85
CTNNA1-219ENST00000520158 GLI2P10070 1586 aa9.72□□□□□ -0.85
CTNNA1-219ENST00000520158 KDM5BQ9UGL1 1544 aa9.72□□□□□ -0.85
CTNNA1-219ENST00000520158 ASXL2Q76L83 1435 aa9.7□□□□□ -0.86
CTNNA1-219ENST00000520158 PRXQ9BXM0 1461 aa9.69□□□□□ -0.86
CTNNA1-219ENST00000520158 KIAA0556O60303 1618 aa9.68□□□□□ -0.86
CTNNA1-219ENST00000520158 KDM6BO15054 1643 aa9.67□□□□□ -0.86
CTNNA1-219ENST00000520158 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
CTNNA1-219ENST00000520158 PPRC1Q5VV67 1664 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-219ENST00000520158 CTTNBP2Q8WZ74 1663 aa9.66□□□□□ -0.86
CTNNA1-219ENST00000520158 EPRSP07814 1512 aaKnown RBP9.66□□□□□ -0.86
CTNNA1-219ENST00000520158 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
CTNNA1-219ENST00000520158 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
CTNNA1-219ENST00000520158 ZCCHC11Q5TAX3 1644 aaKnown RBP9.64□□□□□ -0.87
CTNNA1-219ENST00000520158 TTBK1Q5TCY1 1321 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-219ENST00000520158 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
CTNNA1-219ENST00000520158 ABCA8O94911 1581 aa9.63□□□□□ -0.87
CTNNA1-219ENST00000520158 CSRNP3Q8WYN3 585 aa9.61□□□□□ -0.87
CTNNA1-219ENST00000520158 TEX14Q8IWB6 1497 aa9.6□□□□□ -0.87
CTNNA1-219ENST00000520158 COL17A1Q9UMD9 1497 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-219ENST00000520158 WDR7Q9Y4E6 1490 aa9.6□□□□□ -0.87
CTNNA1-219ENST00000520158 EEA1Q15075 1411 aa9.58□□□□□ -0.88
CTNNA1-219ENST00000520158 MAGI3Q5TCQ9 1506 aa9.58□□□□□ -0.88
CTNNA1-219ENST00000520158 CFAP43Q8NDM7 1665 aa9.57□□□□□ -0.88
CTNNA1-219ENST00000520158 FAM9AQ8IZU1 332 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-219ENST00000520158 CD109Q6YHK3 1445 aa9.56□□□□□ -0.88
CTNNA1-219ENST00000520158 SAMD9Q5K651 1589 aa9.55□□□□□ -0.88
CTNNA1-219ENST00000520158 ATP10BO94823 1461 aa9.54□□□□□ -0.88
CTNNA1-219ENST00000520158 PHLDB1Q86UU1 1377 aa9.53□□□□□ -0.88
CTNNA1-219ENST00000520158 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-219ENST00000520158 ARAP3Q8WWN8 1544 aa9.52□□□□□ -0.88
CTNNA1-219ENST00000520158 KCNH8Q96L42 1107 aa9.52□□□□□ -0.89
CTNNA1-219ENST00000520158 ABCA9Q8IUA7 1624 aa9.5□□□□□ -0.89
CTNNA1-219ENST00000520158 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
CTNNA1-219ENST00000520158 P3H3Q8IVL6 736 aa9.49□□□□□ -0.89
CTNNA1-219ENST00000520158 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
CTNNA1-219ENST00000520158 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-219ENST00000520158 KIF21BO75037 1637 aa9.47□□□□□ -0.89
CTNNA1-219ENST00000520158 NEO1Q92859 1461 aa9.47□□□□□ -0.89
CTNNA1-219ENST00000520158 EFCAB5A4FU69 1503 aa9.46□□□□□ -0.9
CTNNA1-219ENST00000520158 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
CTNNA1-219ENST00000520158 PLEKHD1A6NEE1 506 aa9.44□□□□□ -0.9
CTNNA1-219ENST00000520158 FHOD3Q2V2M9 1422 aa9.43□□□□□ -0.9
CTNNA1-219ENST00000520158 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
CTNNA1-219ENST00000520158 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
CTNNA1-219ENST00000520158 ARID3CA6NKF2 412 aa9.41□□□□□ -0.9
CTNNA1-219ENST00000520158 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-219ENST00000520158 RAPGEF3O95398 923 aa9.39□□□□□ -0.91
CTNNA1-219ENST00000520158 HNRNPUL2Q1KMD3 747 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-219ENST00000520158 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.39□□□□□ -0.91
CTNNA1-219ENST00000520158 FRMPD1Q5SYB0 1578 aa9.38□□□□□ -0.91
CTNNA1-219ENST00000520158 ADAMTSL3P82987 1691 aa9.38□□□□□ -0.91
CTNNA1-219ENST00000520158 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
CTNNA1-219ENST00000520158 AKNAQ7Z591 1439 aa9.38□□□□□ -0.91
CTNNA1-219ENST00000520158 HECW2Q9P2P5 1572 aa9.37□□□□□ -0.91
CTNNA1-219ENST00000520158 RICTORQ6R327 1708 aa9.36□□□□□ -0.91
CTNNA1-219ENST00000520158 FANCAO15360 1455 aa9.36□□□□□ -0.91
CTNNA1-219ENST00000520158 DENND4BO75064 1496 aaPredicted RBP9.36□□□□□ -0.91
CTNNA1-219ENST00000520158 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms