RNA–Protein interactions for RNA: ENST00000520105.5

PTP4A3-203, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-203ENST00000520105 CEP162Q5TB80 1403 aa34.47■■■■□ 3.11
PTP4A3-203ENST00000520105 CTTNBP2Q8WZ74 1663 aa34.45■■■■□ 3.1
PTP4A3-203ENST00000520105 CEP170Q5SW79 1584 aa34.4■■■■□ 3.1
PTP4A3-203ENST00000520105 NUP160Q12769 1436 aa34.38■■■■□ 3.09
PTP4A3-203ENST00000520105 CLIP1P30622 1438 aa34.36■■■■□ 3.09
PTP4A3-203ENST00000520105 KIAA0586Q9BVV6 1533 aa34.33■■■■□ 3.09
PTP4A3-203ENST00000520105 IQGAP2Q13576 1575 aa34.29■■■■□ 3.08
PTP4A3-203ENST00000520105 ARHGAP35Q9NRY4 1499 aa34.2■■■■□ 3.07
PTP4A3-203ENST00000520105 P3H3Q8IVL6 736 aa34.18■■■■□ 3.06
PTP4A3-203ENST00000520105 JPH4Q96JJ6 628 aa34.16■■■■□ 3.06
PTP4A3-203ENST00000520105 OSCARQ8IYS5 282 aa34.12■■■■□ 3.05
PTP4A3-203ENST00000520105 UGGT2Q9NYU1 1516 aa34.12■■■■□ 3.05
PTP4A3-203ENST00000520105 ARAP1Q96P48 1450 aa34.1■■■■□ 3.05
PTP4A3-203ENST00000520105 EFCAB5A4FU69 1503 aa34.08■■■■□ 3.05
PTP4A3-203ENST00000520105 SAMD9Q5K651 1589 aa34.07■■■■□ 3.04
PTP4A3-203ENST00000520105 CLASP1Q7Z460 1538 aa34.07■■■■□ 3.04
PTP4A3-203ENST00000520105 FHOD3Q2V2M9 1422 aa34.04■■■■□ 3.04
PTP4A3-203ENST00000520105 DISP1Q96F81 1524 aa34.02■■■■□ 3.04
PTP4A3-203ENST00000520105 PRG4Q92954 1404 aaPredicted RBP33.96■■■■□ 3.03
PTP4A3-203ENST00000520105 SHROOM2Q13796 1616 aa33.95■■■■□ 3.03
PTP4A3-203ENST00000520105 KIAA0556O60303 1618 aa33.95■■■■□ 3.03
PTP4A3-203ENST00000520105 VPS8Q8N3P4 1428 aa33.94■■■■□ 3.02
PTP4A3-203ENST00000520105 CARMIL2Q6F5E8 1435 aa33.93■■■■□ 3.02
PTP4A3-203ENST00000520105 TTBK1Q5TCY1 1321 aaPredicted RBP33.89■■■■□ 3.02
PTP4A3-203ENST00000520105 ERCC6L2Q5T890 1561 aa33.84■■■■□ 3.01
PTP4A3-203ENST00000520105 FMN1Q68DA7 1419 aa33.81■■■■□ 3
PTP4A3-203ENST00000520105 ATP1B4Q9UN42 357 aaPredicted RBP33.73■■■□□ 2.99
PTP4A3-203ENST00000520105 PCF11O94913 1555 aaKnown RBP33.71■■■□□ 2.99
PTP4A3-203ENST00000520105 PTPRGP23470 1445 aa33.69■■■□□ 2.98
PTP4A3-203ENST00000520105 CASKIN1Q8WXD9 1431 aa33.68■■■□□ 2.98
PTP4A3-203ENST00000520105 PPARGC1BQ86YN6 1023 aaKnown RBP33.63■■■□□ 2.97
PTP4A3-203ENST00000520105 FYCO1Q9BQS8 1478 aa33.63■■■□□ 2.97
PTP4A3-203ENST00000520105 APLP2Q06481 763 aa33.63■■■□□ 2.97
PTP4A3-203ENST00000520105 PLB1Q6P1J6 1458 aa33.61■■■□□ 2.97
PTP4A3-203ENST00000520105 RAPGEF6Q8TEU7 1601 aa33.55■■■□□ 2.96
PTP4A3-203ENST00000520105 ARID3CA6NKF2 412 aa33.53■■■□□ 2.96
PTP4A3-203ENST00000520105 ABCA8O94911 1581 aa33.51■■■□□ 2.95
PTP4A3-203ENST00000520105 ARHGEF11O15085 1522 aa33.5■■■□□ 2.95
PTP4A3-203ENST00000520105 HECW1Q76N89 1606 aa33.5■■■□□ 2.95
PTP4A3-203ENST00000520105 LRRIQ1Q96JM4 1722 aa33.49■■■□□ 2.95
PTP4A3-203ENST00000520105 NUP153P49790 1475 aaKnown RBP33.48■■■□□ 2.95
PTP4A3-203ENST00000520105 UACAQ9BZF9 1416 aa33.47■■■□□ 2.95
PTP4A3-203ENST00000520105 KANK4Q5T7N3 995 aaPredicted RBP33.46■■■□□ 2.95
PTP4A3-203ENST00000520105 TIAM1Q13009 1591 aa33.44■■■□□ 2.94
PTP4A3-203ENST00000520105 EPRSP07814 1512 aaKnown RBP33.43■■■□□ 2.94
PTP4A3-203ENST00000520105 MAP3K1Q13233 1512 aa33.42■■■□□ 2.94
PTP4A3-203ENST00000520105 CDK13Q14004 1512 aaKnown RBP33.4■■■□□ 2.94
PTP4A3-203ENST00000520105 RIMBP3CA6NJZ7 1639 aa33.39■■■□□ 2.94
PTP4A3-203ENST00000520105 RIMBP3BA6NNM3 1639 aa33.39■■■□□ 2.94
PTP4A3-203ENST00000520105 RIMBP3Q9UFD9 1639 aa33.39■■■□□ 2.94
PTP4A3-203ENST00000520105 CFAP43Q8NDM7 1665 aa33.38■■■□□ 2.93
PTP4A3-203ENST00000520105 CCDC18Q5T9S5 1454 aa33.38■■■□□ 2.93
PTP4A3-203ENST00000520105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.37■■■□□ 2.93
PTP4A3-203ENST00000520105 HNRNPUL2Q1KMD3 747 aaKnown RBP33.37■■■□□ 2.93
PTP4A3-203ENST00000520105 ABCC2Q92887 1545 aa33.35■■■□□ 2.93
PTP4A3-203ENST00000520105 ATP10BO94823 1461 aa33.31■■■□□ 2.92
PTP4A3-203ENST00000520105 LRRC9Q6ZRR7 1453 aa33.31■■■□□ 2.92
PTP4A3-203ENST00000520105 UHRF1BP1LA0JNW5 1464 aa33.3■■■□□ 2.92
PTP4A3-203ENST00000520105 CYB5RLQ6IPT4 315 aa33.28■■■□□ 2.92
PTP4A3-203ENST00000520105 ADCY10Q96PN6 1610 aa33.26■■■□□ 2.92
PTP4A3-203ENST00000520105 MTUS2Q5JR59 1369 aa33.25■■■□□ 2.91
PTP4A3-203ENST00000520105 MAGI3Q5TCQ9 1506 aa33.24■■■□□ 2.91
PTP4A3-203ENST00000520105 CDK11AQ9UQ88 783 aaPredicted RBP33.21■■■□□ 2.91
PTP4A3-203ENST00000520105 KDM5BQ9UGL1 1544 aa33.18■■■□□ 2.9
PTP4A3-203ENST00000520105 PLEKHD1A6NEE1 506 aa33.15■■■□□ 2.9
PTP4A3-203ENST00000520105 ZCCHC11Q5TAX3 1644 aaKnown RBP33.14■■■□□ 2.9
PTP4A3-203ENST00000520105 EHBP1L1Q8N3D4 1523 aa33.13■■■□□ 2.89
PTP4A3-203ENST00000520105 TROQ12816 1431 aaPredicted RBP33.09■■■□□ 2.89
PTP4A3-203ENST00000520105 NPM1P06748 294 aaKnown RBP eCLIP33.06■■■□□ 2.88
PTP4A3-203ENST00000520105 NCOA2Q15596 1464 aa33.03■■■□□ 2.88
PTP4A3-203ENST00000520105 TRIM26Q12899 539 aaPredicted RBP33.03■■■□□ 2.88
PTP4A3-203ENST00000520105 SUPT6HQ7KZ85 1726 aaKnown RBP33.03■■■□□ 2.88
PTP4A3-203ENST00000520105 PHLDB1Q86UU1 1377 aa33.01■■■□□ 2.87
PTP4A3-203ENST00000520105 DNAJC5Q9H3Z4 198 aa33.01■■■□□ 2.87
PTP4A3-203ENST00000520105 KCNH8Q96L42 1107 aa32.97■■■□□ 2.87
PTP4A3-203ENST00000520105 KIF14Q15058 1648 aa32.96■■■□□ 2.87
PTP4A3-203ENST00000520105 ASXL2Q76L83 1435 aa32.92■■■□□ 2.86
PTP4A3-203ENST00000520105 PCGF6Q9BYE7 350 aa32.91■■■□□ 2.86
PTP4A3-203ENST00000520105 WDR7Q9Y4E6 1490 aa32.89■■■□□ 2.86
PTP4A3-203ENST00000520105 MYOM3Q5VTT5 1437 aa32.85■■■□□ 2.85
PTP4A3-203ENST00000520105 CCNB3Q8WWL7 1395 aa32.85■■■□□ 2.85
PTP4A3-203ENST00000520105 ABCC10Q5T3U5 1492 aa32.83■■■□□ 2.85
PTP4A3-203ENST00000520105 RRBP1Q9P2E9 1410 aaKnown RBP32.82■■■□□ 2.84
PTP4A3-203ENST00000520105 FGD6Q6ZV73 1430 aa32.79■■■□□ 2.84
PTP4A3-203ENST00000520105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.79■■■□□ 2.841e-6■■■■□ 24.8
PTP4A3-203ENST00000520105 GPATCH8Q9UKJ3 1502 aaKnown RBP32.77■■■□□ 2.84
PTP4A3-203ENST00000520105 MAPKBP1O60336 1514 aa32.76■■■□□ 2.84
PTP4A3-203ENST00000520105 TTC37Q6PGP7 1564 aa32.75■■■□□ 2.83
PTP4A3-203ENST00000520105 FAM50AQ14320 339 aaKnown RBP32.74■■■□□ 2.83
PTP4A3-203ENST00000520105 CFDP1Q9UEE9 299 aaPredicted RBP32.71■■■□□ 2.83
PTP4A3-203ENST00000520105 CDC42BPAQ5VT25 1732 aa32.71■■■□□ 2.83
PTP4A3-203ENST00000520105 MIA2Q96PC5 1412 aa32.69■■■□□ 2.82
PTP4A3-203ENST00000520105 ITSN2Q9NZM3 1697 aa32.67■■■□□ 2.82
PTP4A3-203ENST00000520105 PTPN23Q9H3S7 1636 aa32.66■■■□□ 2.82
PTP4A3-203ENST00000520105 ZNF644Q9H582 1327 aaPredicted RBP32.65■■■□□ 2.82
PTP4A3-203ENST00000520105 ZNF777Q9ULD5 760 aaPredicted RBP32.65■■■□□ 2.82
PTP4A3-203ENST00000520105 ABCA9Q8IUA7 1624 aa32.63■■■□□ 2.81
PTP4A3-203ENST00000520105 CDC42BPBQ9Y5S2 1711 aa32.62■■■□□ 2.81
PTP4A3-203ENST00000520105 ITGAEP38570 1179 aa32.61■■■□□ 2.81
PTP4A3-203ENST00000520105 MYO5CQ9NQX4 1742 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms