RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
R3HCC1-205ENST00000519952 MAPKBP1O60336 1514 aa20.48■□□□□ 0.87
R3HCC1-205ENST00000519952 NUP160Q12769 1436 aa20.45■□□□□ 0.86
R3HCC1-205ENST00000519952 CUX1P39880 1505 aa20.43■□□□□ 0.86
R3HCC1-205ENST00000519952 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
R3HCC1-205ENST00000519952 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
R3HCC1-205ENST00000519952 SOCS7O14512 581 aa20.38■□□□□ 0.85
R3HCC1-205ENST00000519952 ADCY10Q96PN6 1610 aa20.34■□□□□ 0.85
R3HCC1-205ENST00000519952 ADAMTS12P58397 1594 aa20.34■□□□□ 0.85
R3HCC1-205ENST00000519952 ILDR2Q71H61 639 aa20.32■□□□□ 0.84
R3HCC1-205ENST00000519952 WRNQ14191 1432 aaPredicted RBP eCLIP20.32■□□□□ 0.84
R3HCC1-205ENST00000519952 ABCA10Q8WWZ4 1543 aa20.31■□□□□ 0.84
R3HCC1-205ENST00000519952 JPH4Q96JJ6 628 aa20.3■□□□□ 0.84
R3HCC1-205ENST00000519952 FHAD1B1AJZ9 1412 aa20.23■□□□□ 0.83
R3HCC1-205ENST00000519952 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
R3HCC1-205ENST00000519952 PPRC1Q5VV67 1664 aaKnown RBP20.21■□□□□ 0.83
R3HCC1-205ENST00000519952 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
R3HCC1-205ENST00000519952 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
R3HCC1-205ENST00000519952 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1-205ENST00000519952 RUSC2Q8N2Y8 1516 aa20.07■□□□□ 0.8
R3HCC1-205ENST00000519952 GLI2P10070 1586 aa20.07■□□□□ 0.8
R3HCC1-205ENST00000519952 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
R3HCC1-205ENST00000519952 ERICH3Q5RHP9 1530 aa20.03■□□□□ 0.8
R3HCC1-205ENST00000519952 FAM9AQ8IZU1 332 aaPredicted RBP20.02■□□□□ 0.8
R3HCC1-205ENST00000519952 PLB1Q6P1J6 1458 aa20.01■□□□□ 0.79
R3HCC1-205ENST00000519952 TTBK1Q5TCY1 1321 aaPredicted RBP20.01■□□□□ 0.79
R3HCC1-205ENST00000519952 TEX14Q8IWB6 1497 aa19.98■□□□□ 0.79
R3HCC1-205ENST00000519952 ABCC2Q92887 1545 aa19.95■□□□□ 0.78
R3HCC1-205ENST00000519952 MAP3K4Q9Y6R4 1608 aa19.94■□□□□ 0.78
R3HCC1-205ENST00000519952 EEA1Q15075 1411 aa19.93■□□□□ 0.78
R3HCC1-205ENST00000519952 CERKQ8TCT0 537 aa19.93■□□□□ 0.78
R3HCC1-205ENST00000519952 PTPRGP23470 1445 aa19.93■□□□□ 0.78
R3HCC1-205ENST00000519952 CUL7Q14999 1698 aa19.92■□□□□ 0.78
R3HCC1-205ENST00000519952 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
R3HCC1-205ENST00000519952 KIF21BO75037 1637 aa19.91■□□□□ 0.78
R3HCC1-205ENST00000519952 EPRSP07814 1512 aaKnown RBP19.9■□□□□ 0.78
R3HCC1-205ENST00000519952 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
R3HCC1-205ENST00000519952 PTPRMP28827 1452 aa19.88■□□□□ 0.77
R3HCC1-205ENST00000519952 PCF11O94913 1555 aaKnown RBP19.87■□□□□ 0.77
R3HCC1-205ENST00000519952 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
R3HCC1-205ENST00000519952 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
R3HCC1-205ENST00000519952 KIAA0586Q9BVV6 1533 aa19.84■□□□□ 0.77
R3HCC1-205ENST00000519952 IGF1RP08069 1367 aa19.8■□□□□ 0.76
R3HCC1-205ENST00000519952 TNIKQ9UKE5 1360 aa19.78■□□□□ 0.76
R3HCC1-205ENST00000519952 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.76
R3HCC1-205ENST00000519952 HSPA2P54652 639 aa19.76■□□□□ 0.75
R3HCC1-205ENST00000519952 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
R3HCC1-205ENST00000519952 EHMT2Q96KQ7 1210 aa19.72■□□□□ 0.75
R3HCC1-205ENST00000519952 UACAQ9BZF9 1416 aa19.72■□□□□ 0.75
R3HCC1-205ENST00000519952 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
R3HCC1-205ENST00000519952 ZCCHC11Q5TAX3 1644 aaKnown RBP19.69■□□□□ 0.74
R3HCC1-205ENST00000519952 CARMIL1Q5VZK9 1371 aa19.69■□□□□ 0.74
R3HCC1-205ENST00000519952 KDM5BQ9UGL1 1544 aa19.68■□□□□ 0.74
R3HCC1-205ENST00000519952 CD109Q6YHK3 1445 aa19.67■□□□□ 0.74
R3HCC1-205ENST00000519952 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
R3HCC1-205ENST00000519952 MAGI3Q5TCQ9 1506 aa19.65■□□□□ 0.74
R3HCC1-205ENST00000519952 GOLGA3Q08378 1498 aa19.62■□□□□ 0.73
R3HCC1-205ENST00000519952 WDR7Q9Y4E6 1490 aa19.62■□□□□ 0.73
R3HCC1-205ENST00000519952 UBTFP17480 764 aaKnown RBP19.62■□□□□ 0.73
R3HCC1-205ENST00000519952 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
R3HCC1-205ENST00000519952 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
R3HCC1-205ENST00000519952 ARID4BQ4LE39 1312 aaPredicted RBP19.61■□□□□ 0.73
R3HCC1-205ENST00000519952 CFAP43Q8NDM7 1665 aa19.61■□□□□ 0.73
R3HCC1-205ENST00000519952 KCNH8Q96L42 1107 aa19.59■□□□□ 0.73
R3HCC1-205ENST00000519952 RIMS1Q86UR5 1692 aaKnown RBP19.57■□□□□ 0.72
R3HCC1-205ENST00000519952 RAPGEF2Q9Y4G8 1499 aa19.57■□□□□ 0.72
R3HCC1-205ENST00000519952 PRXQ9BXM0 1461 aa19.55■□□□□ 0.72
R3HCC1-205ENST00000519952 ARAP3Q8WWN8 1544 aa19.53■□□□□ 0.72
R3HCC1-205ENST00000519952 IQGAP2Q13576 1575 aa19.49■□□□□ 0.71
R3HCC1-205ENST00000519952 DISP1Q96F81 1524 aa19.49■□□□□ 0.71
R3HCC1-205ENST00000519952 RAPGEF3O95398 923 aa19.47■□□□□ 0.71
R3HCC1-205ENST00000519952 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
R3HCC1-205ENST00000519952 CEP162Q5TB80 1403 aa19.39■□□□□ 0.69
R3HCC1-205ENST00000519952 YEATS2Q9ULM3 1422 aa19.37■□□□□ 0.69
R3HCC1-205ENST00000519952 STRCQ7RTU9 1775 aa19.34■□□□□ 0.69
R3HCC1-205ENST00000519952 PHLDB1Q86UU1 1377 aa19.34■□□□□ 0.69
R3HCC1-205ENST00000519952 KIAA0556O60303 1618 aa19.34■□□□□ 0.69
R3HCC1-205ENST00000519952 RANGAP1P46060 587 aaPredicted RBP19.32■□□□□ 0.68
R3HCC1-205ENST00000519952 FRMPD1Q5SYB0 1578 aa19.31■□□□□ 0.68
R3HCC1-205ENST00000519952 CLIP1P30622 1438 aa19.3■□□□□ 0.68
R3HCC1-205ENST00000519952 UGGT2Q9NYU1 1516 aa19.3■□□□□ 0.68
R3HCC1-205ENST00000519952 POGZQ7Z3K3 1410 aa19.29■□□□□ 0.68
R3HCC1-205ENST00000519952 PREX1Q8TCU6 1659 aa19.29■□□□□ 0.68
R3HCC1-205ENST00000519952 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
R3HCC1-205ENST00000519952 MLECQ14165 292 aa19.28■□□□□ 0.68
R3HCC1-205ENST00000519952 FER1L4A9Z1Z3 1794 aa19.27■□□□□ 0.67
R3HCC1-205ENST00000519952 CTTNBP2Q8WZ74 1663 aa19.26■□□□□ 0.67
R3HCC1-205ENST00000519952 FANCAO15360 1455 aa19.25■□□□□ 0.67
R3HCC1-205ENST00000519952 IQSEC2Q5JU85 1478 aa19.24■□□□□ 0.67
R3HCC1-205ENST00000519952 NEO1Q92859 1461 aa19.24■□□□□ 0.67
R3HCC1-205ENST00000519952 LTBP4Q8N2S1 1624 aa19.23■□□□□ 0.67
R3HCC1-205ENST00000519952 TTC37Q6PGP7 1564 aa19.23■□□□□ 0.67
R3HCC1-205ENST00000519952 ARID3CA6NKF2 412 aa19.22■□□□□ 0.67
R3HCC1-205ENST00000519952 ABCA8O94911 1581 aa19.22■□□□□ 0.67
R3HCC1-205ENST00000519952 ABCA9Q8IUA7 1624 aa19.22■□□□□ 0.67
R3HCC1-205ENST00000519952 PTPRTO14522 1441 aa19.2■□□□□ 0.66
R3HCC1-205ENST00000519952 UBAP1LF5GYI3 381 aa19.2■□□□□ 0.66
R3HCC1-205ENST00000519952 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
R3HCC1-205ENST00000519952 P3H3Q8IVL6 736 aa19.19■□□□□ 0.66
R3HCC1-205ENST00000519952 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms