RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 PLPPR3Q6T4P5 718 aa25.91■■□□□ 1.74
FBXO28-204ENST00000519894 NUP160Q12769 1436 aa25.88■■□□□ 1.73
FBXO28-204ENST00000519894 CEP170Q5SW79 1584 aa25.86■■□□□ 1.73
FBXO28-204ENST00000519894 ADRA2BP18089 450 aa25.83■■□□□ 1.73
FBXO28-204ENST00000519894 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
FBXO28-204ENST00000519894 IGF1RP08069 1367 aa25.79■■□□□ 1.72
FBXO28-204ENST00000519894 ERCC6L2Q5T890 1561 aa25.72■■□□□ 1.71
FBXO28-204ENST00000519894 SHROOM2Q13796 1616 aa25.7■■□□□ 1.71
FBXO28-204ENST00000519894 CUL7Q14999 1698 aa25.67■■□□□ 1.7
FBXO28-204ENST00000519894 JPH4Q96JJ6 628 aa25.64■■□□□ 1.7
FBXO28-204ENST00000519894 CARMIL1Q5VZK9 1371 aa25.62■■□□□ 1.69
FBXO28-204ENST00000519894 RUSC2Q8N2Y8 1516 aa25.61■■□□□ 1.69
FBXO28-204ENST00000519894 PRG4Q92954 1404 aaPredicted RBP25.59■■□□□ 1.69
FBXO28-204ENST00000519894 KIAA0586Q9BVV6 1533 aa25.55■■□□□ 1.68
FBXO28-204ENST00000519894 TRHP20396 242 aaPredicted RBP25.54■■□□□ 1.68
FBXO28-204ENST00000519894 RAPGEF2Q9Y4G8 1499 aa25.41■■□□□ 1.66
FBXO28-204ENST00000519894 IQGAP2Q13576 1575 aa25.33■■□□□ 1.65
FBXO28-204ENST00000519894 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
FBXO28-204ENST00000519894 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
FBXO28-204ENST00000519894 PTPRGP23470 1445 aa25.24■■□□□ 1.63
FBXO28-204ENST00000519894 TNIKQ9UKE5 1360 aa25.23■■□□□ 1.63
FBXO28-204ENST00000519894 ADCY10Q96PN6 1610 aa25.23■■□□□ 1.63
FBXO28-204ENST00000519894 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
FBXO28-204ENST00000519894 UGGT2Q9NYU1 1516 aa25.21■■□□□ 1.63
FBXO28-204ENST00000519894 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.62
FBXO28-204ENST00000519894 NPM1P06748 294 aaKnown RBP eCLIP25.2■■□□□ 1.62
FBXO28-204ENST00000519894 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
FBXO28-204ENST00000519894 CTTNBP2Q8WZ74 1663 aa25.16■■□□□ 1.62
FBXO28-204ENST00000519894 KIAA0556O60303 1618 aa25.12■■□□□ 1.61
FBXO28-204ENST00000519894 MAPKBP1O60336 1514 aa25.12■■□□□ 1.61
FBXO28-204ENST00000519894 KIF13AQ9H1H9 1805 aa25.11■■□□□ 1.61
FBXO28-204ENST00000519894 EEA1Q15075 1411 aa25.1■■□□□ 1.61
FBXO28-204ENST00000519894 ABCC10Q5T3U5 1492 aa25.07■■□□□ 1.6
FBXO28-204ENST00000519894 UACAQ9BZF9 1416 aa25.06■■□□□ 1.6
FBXO28-204ENST00000519894 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
FBXO28-204ENST00000519894 ABCC2Q92887 1545 aa25.04■■□□□ 1.6
FBXO28-204ENST00000519894 FAM69CQ0P6D2 419 aa25.04■■□□□ 1.6
FBXO28-204ENST00000519894 FAM9AQ8IZU1 332 aaPredicted RBP25.03■■□□□ 1.6
FBXO28-204ENST00000519894 GOLGA3Q08378 1498 aa25.02■■□□□ 1.6
FBXO28-204ENST00000519894 DIP2BQ9P265 1576 aa25.01■■□□□ 1.59
FBXO28-204ENST00000519894 KDM5BQ9UGL1 1544 aa24.94■■□□□ 1.58
FBXO28-204ENST00000519894 ASXL2Q76L83 1435 aa24.93■■□□□ 1.58
FBXO28-204ENST00000519894 PLB1Q6P1J6 1458 aa24.91■■□□□ 1.58
FBXO28-204ENST00000519894 P3H3Q8IVL6 736 aa24.89■■□□□ 1.58
FBXO28-204ENST00000519894 ABCA8O94911 1581 aa24.88■■□□□ 1.57
FBXO28-204ENST00000519894 KIF21BO75037 1637 aa24.87■■□□□ 1.57
FBXO28-204ENST00000519894 ZCCHC11Q5TAX3 1644 aaKnown RBP24.87■■□□□ 1.57
FBXO28-204ENST00000519894 SAMD9Q5K651 1589 aa24.84■■□□□ 1.57
FBXO28-204ENST00000519894 TSPOAP1O95153 1857 aa24.81■■□□□ 1.56
FBXO28-204ENST00000519894 GLI2P10070 1586 aa24.81■■□□□ 1.56
FBXO28-204ENST00000519894 RANGAP1P46060 587 aaPredicted RBP24.79■■□□□ 1.56
FBXO28-204ENST00000519894 EPRSP07814 1512 aaKnown RBP24.79■■□□□ 1.56
FBXO28-204ENST00000519894 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
FBXO28-204ENST00000519894 WDR7Q9Y4E6 1490 aa24.73■■□□□ 1.55
FBXO28-204ENST00000519894 PPRC1Q5VV67 1664 aaKnown RBP24.72■■□□□ 1.55
FBXO28-204ENST00000519894 FHOD3Q2V2M9 1422 aa24.7■■□□□ 1.55
FBXO28-204ENST00000519894 UBTFP17480 764 aaKnown RBP24.7■■□□□ 1.54
FBXO28-204ENST00000519894 ATP10BO94823 1461 aa24.69■■□□□ 1.54
FBXO28-204ENST00000519894 ARID3CA6NKF2 412 aa24.68■■□□□ 1.54
FBXO28-204ENST00000519894 KDM6BO15054 1643 aa24.68■■□□□ 1.54
FBXO28-204ENST00000519894 MAP3K4Q9Y6R4 1608 aa24.68■■□□□ 1.54
FBXO28-204ENST00000519894 RAPGEF6Q8TEU7 1601 aa24.67■■□□□ 1.54
FBXO28-204ENST00000519894 KCNH8Q96L42 1107 aa24.65■■□□□ 1.54
FBXO28-204ENST00000519894 EFCAB5A4FU69 1503 aa24.65■■□□□ 1.54
FBXO28-204ENST00000519894 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.53
FBXO28-204ENST00000519894 TEX14Q8IWB6 1497 aa24.57■■□□□ 1.52
FBXO28-204ENST00000519894 CD109Q6YHK3 1445 aa24.56■■□□□ 1.52
FBXO28-204ENST00000519894 CFAP43Q8NDM7 1665 aa24.56■■□□□ 1.52
FBXO28-204ENST00000519894 COL17A1Q9UMD9 1497 aaPredicted RBP24.54■■□□□ 1.52
FBXO28-204ENST00000519894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.54■■□□□ 1.52
FBXO28-204ENST00000519894 HNRNPUL2Q1KMD3 747 aaKnown RBP24.54■■□□□ 1.52
FBXO28-204ENST00000519894 ARHGAP35Q9NRY4 1499 aa24.53■■□□□ 1.52
FBXO28-204ENST00000519894 MAGI3Q5TCQ9 1506 aa24.52■■□□□ 1.52
FBXO28-204ENST00000519894 ABCA9Q8IUA7 1624 aa24.45■■□□□ 1.5
FBXO28-204ENST00000519894 FMN1Q68DA7 1419 aa24.44■■□□□ 1.5
FBXO28-204ENST00000519894 PLEKHD1A6NEE1 506 aa24.43■■□□□ 1.5
FBXO28-204ENST00000519894 CDK13Q14004 1512 aaKnown RBP24.39■■□□□ 1.49
FBXO28-204ENST00000519894 ATP1B4Q9UN42 357 aaPredicted RBP24.37■■□□□ 1.49
FBXO28-204ENST00000519894 HECW1Q76N89 1606 aa24.35■■□□□ 1.49
FBXO28-204ENST00000519894 KDM4FA0A1W2PPD8 638 aa24.33■■□□□ 1.49
FBXO28-204ENST00000519894 ARAP3Q8WWN8 1544 aa24.31■■□□□ 1.48
FBXO28-204ENST00000519894 PHLDB1Q86UU1 1377 aa24.3■■□□□ 1.48
FBXO28-204ENST00000519894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
FBXO28-204ENST00000519894 NEO1Q92859 1461 aa24.28■■□□□ 1.48
FBXO28-204ENST00000519894 CLIP1P30622 1438 aa24.26■■□□□ 1.47
FBXO28-204ENST00000519894 LRRIQ1Q96JM4 1722 aa24.24■■□□□ 1.47
FBXO28-204ENST00000519894 TTC37Q6PGP7 1564 aa24.24■■□□□ 1.47
FBXO28-204ENST00000519894 CDK11AQ9UQ88 783 aaPredicted RBP24.23■■□□□ 1.47
FBXO28-204ENST00000519894 CASKIN1Q8WXD9 1431 aa24.23■■□□□ 1.47
FBXO28-204ENST00000519894 PCF11O94913 1555 aaKnown RBP24.21■■□□□ 1.47
FBXO28-204ENST00000519894 RAPGEF3O95398 923 aa24.21■■□□□ 1.47
FBXO28-204ENST00000519894 FANCAO15360 1455 aa24.18■■□□□ 1.46
FBXO28-204ENST00000519894 TROQ12816 1431 aaPredicted RBP24.18■■□□□ 1.46
FBXO28-204ENST00000519894 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
FBXO28-204ENST00000519894 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
FBXO28-204ENST00000519894 PLCH2O75038 1416 aa24.16■■□□□ 1.46
FBXO28-204ENST00000519894 KIF14Q15058 1648 aa24.14■■□□□ 1.46
FBXO28-204ENST00000519894 FRMPD1Q5SYB0 1578 aa24.14■■□□□ 1.45
FBXO28-204ENST00000519894 CCDC18Q5T9S5 1454 aa24.13■■□□□ 1.45
FBXO28-204ENST00000519894 CFAP74Q9C0B2 1584 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms