RNA–Protein interactions for RNA: ENST00000519686.6

VNN3-212, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,377 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-212ENST00000519686 CLASP1Q7Z460 1538 aa16.03■□□□□ 0.16
VNN3-212ENST00000519686 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
VNN3-212ENST00000519686 TOP2BQ02880 1626 aa16.02■□□□□ 0.16
VNN3-212ENST00000519686 BIVM-ERCC5R4GMW8 1640 aa16.02■□□□□ 0.16
VNN3-212ENST00000519686 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
VNN3-212ENST00000519686 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
VNN3-212ENST00000519686 GRIN2AQ12879 1464 aa15.92■□□□□ 0.14
VNN3-212ENST00000519686 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
VNN3-212ENST00000519686 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
VNN3-212ENST00000519686 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
VNN3-212ENST00000519686 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
VNN3-212ENST00000519686 NUP160Q12769 1436 aa15.83■□□□□ 0.12
VNN3-212ENST00000519686 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
VNN3-212ENST00000519686 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
VNN3-212ENST00000519686 SHROOM2Q13796 1616 aa15.77■□□□□ 0.12
VNN3-212ENST00000519686 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
VNN3-212ENST00000519686 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
VNN3-212ENST00000519686 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
VNN3-212ENST00000519686 PRG4Q92954 1404 aaPredicted RBP15.71■□□□□ 0.11
VNN3-212ENST00000519686 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
VNN3-212ENST00000519686 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
VNN3-212ENST00000519686 CUL7Q14999 1698 aa15.69■□□□□ 0.1
VNN3-212ENST00000519686 IGF1RP08069 1367 aa15.67■□□□□ 0.1
VNN3-212ENST00000519686 KIAA0586Q9BVV6 1533 aa15.62■□□□□ 0.09
VNN3-212ENST00000519686 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
VNN3-212ENST00000519686 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
VNN3-212ENST00000519686 ADCY10Q96PN6 1610 aa15.52■□□□□ 0.07
VNN3-212ENST00000519686 KIF13AQ9H1H9 1805 aa15.52■□□□□ 0.07
VNN3-212ENST00000519686 CARMIL2Q6F5E8 1435 aa15.51■□□□□ 0.07
VNN3-212ENST00000519686 IQGAP2Q13576 1575 aa15.5■□□□□ 0.07
VNN3-212ENST00000519686 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
VNN3-212ENST00000519686 MAPKBP1O60336 1514 aa15.48■□□□□ 0.07
VNN3-212ENST00000519686 PTPRGP23470 1445 aa15.48■□□□□ 0.07
VNN3-212ENST00000519686 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
VNN3-212ENST00000519686 FAM69CQ0P6D2 419 aa15.47■□□□□ 0.07
VNN3-212ENST00000519686 ABCC10Q5T3U5 1492 aa15.45■□□□□ 0.06
VNN3-212ENST00000519686 TNIKQ9UKE5 1360 aa15.45■□□□□ 0.06
VNN3-212ENST00000519686 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
VNN3-212ENST00000519686 DIP2BQ9P265 1576 aa15.43■□□□□ 0.06
VNN3-212ENST00000519686 ABCC2Q92887 1545 aa15.38■□□□□ 0.05
VNN3-212ENST00000519686 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
VNN3-212ENST00000519686 UGGT2Q9NYU1 1516 aa15.37■□□□□ 0.05
VNN3-212ENST00000519686 CTTNBP2Q8WZ74 1663 aa15.37■□□□□ 0.05
VNN3-212ENST00000519686 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
VNN3-212ENST00000519686 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
VNN3-212ENST00000519686 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
VNN3-212ENST00000519686 KIAA0556O60303 1618 aa15.34■□□□□ 0.05
VNN3-212ENST00000519686 ASXL2Q76L83 1435 aa15.32■□□□□ 0.04
VNN3-212ENST00000519686 SLC4A1APQ9BWU0 796 aaKnown RBP15.32■□□□□ 0.04
VNN3-212ENST00000519686 PLB1Q6P1J6 1458 aa15.32■□□□□ 0.04
VNN3-212ENST00000519686 KDM6BO15054 1643 aa15.31■□□□□ 0.04
VNN3-212ENST00000519686 GOLGA3Q08378 1498 aa15.3■□□□□ 0.04
VNN3-212ENST00000519686 PRXQ9BXM0 1461 aa15.29■□□□□ 0.04
VNN3-212ENST00000519686 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.04
VNN3-212ENST00000519686 ZCCHC11Q5TAX3 1644 aaKnown RBP15.27■□□□□ 0.04
VNN3-212ENST00000519686 GLI2P10070 1586 aa15.26■□□□□ 0.03
VNN3-212ENST00000519686 FAM9AQ8IZU1 332 aaPredicted RBP15.24■□□□□ 0.03
VNN3-212ENST00000519686 EPRSP07814 1512 aaKnown RBP15.22■□□□□ 0.03
VNN3-212ENST00000519686 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
VNN3-212ENST00000519686 PPRC1Q5VV67 1664 aaKnown RBP15.2■□□□□ 0.02
VNN3-212ENST00000519686 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
VNN3-212ENST00000519686 WDR7Q9Y4E6 1490 aa15.19■□□□□ 0.02
VNN3-212ENST00000519686 ABCA8O94911 1581 aa15.19■□□□□ 0.02
VNN3-212ENST00000519686 TEX14Q8IWB6 1497 aa15.18■□□□□ 0.02
VNN3-212ENST00000519686 EEA1Q15075 1411 aa15.17■□□□□ 0.02
VNN3-212ENST00000519686 P3H3Q8IVL6 736 aa15.16■□□□□ 0.02
VNN3-212ENST00000519686 KCNH8Q96L42 1107 aa15.13■□□□□ 0.01
VNN3-212ENST00000519686 ARID3CA6NKF2 412 aa15.11■□□□□ 0.01
VNN3-212ENST00000519686 SAMD9Q5K651 1589 aa15.11■□□□□ 0.01
VNN3-212ENST00000519686 RANGAP1P46060 587 aaPredicted RBP15.11■□□□□ 0.01
VNN3-212ENST00000519686 CFAP43Q8NDM7 1665 aa15.1■□□□□ 0.01
VNN3-212ENST00000519686 CD109Q6YHK3 1445 aa15.09■□□□□ 0.01
VNN3-212ENST00000519686 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
VNN3-212ENST00000519686 KDM4FA0A1W2PPD8 638 aa15.07■□□□□ 0
VNN3-212ENST00000519686 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
VNN3-212ENST00000519686 ATP10BO94823 1461 aa15.06■□□□□ 0
VNN3-212ENST00000519686 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
VNN3-212ENST00000519686 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
VNN3-212ENST00000519686 MAGI3Q5TCQ9 1506 aa15.06■□□□□ 0
VNN3-212ENST00000519686 KIF21BO75037 1637 aa15.05■□□□□ -0
VNN3-212ENST00000519686 FHOD3Q2V2M9 1422 aa15.02□□□□□ -0.01
VNN3-212ENST00000519686 ADGRL1O94910 1474 aa15□□□□□ -0.01
VNN3-212ENST00000519686 SLC4A2P04920 1241 aa15□□□□□ -0.01
VNN3-212ENST00000519686 EFCAB5A4FU69 1503 aa14.99□□□□□ -0.01
VNN3-212ENST00000519686 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
VNN3-212ENST00000519686 NUP153P49790 1475 aaKnown RBP14.98□□□□□ -0.01
VNN3-212ENST00000519686 ABCA9Q8IUA7 1624 aa14.98□□□□□ -0.01
VNN3-212ENST00000519686 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
VNN3-212ENST00000519686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
VNN3-212ENST00000519686 ARAP3Q8WWN8 1544 aa14.94□□□□□ -0.02
VNN3-212ENST00000519686 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
VNN3-212ENST00000519686 PHLDB1Q86UU1 1377 aa14.94□□□□□ -0.02
VNN3-212ENST00000519686 NEO1Q92859 1461 aa14.9□□□□□ -0.02
VNN3-212ENST00000519686 ATP1B4Q9UN42 357 aaPredicted RBP14.89□□□□□ -0.03
VNN3-212ENST00000519686 FMN1Q68DA7 1419 aa14.88□□□□□ -0.03
VNN3-212ENST00000519686 RAPGEF3O95398 923 aa14.87□□□□□ -0.03
VNN3-212ENST00000519686 ZBTB22O15209 634 aa14.86□□□□□ -0.03
VNN3-212ENST00000519686 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
VNN3-212ENST00000519686 CFAP74Q9C0B2 1584 aa14.86□□□□□ -0.03
VNN3-212ENST00000519686 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms