RNA–Protein interactions for RNA: ENST00000518954.5

RUNX1T1-216, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-216ENST00000518954 NUP160Q12769 1436 aa13.66□□□□□ -0.22
RUNX1T1-216ENST00000518954 CUL7Q14999 1698 aa13.65□□□□□ -0.22
RUNX1T1-216ENST00000518954 CYB5RLQ6IPT4 315 aa13.64□□□□□ -0.23
RUNX1T1-216ENST00000518954 KCNA4P22459 653 aa13.61□□□□□ -0.23
RUNX1T1-216ENST00000518954 IGF1RP08069 1367 aa13.6□□□□□ -0.23
RUNX1T1-216ENST00000518954 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
RUNX1T1-216ENST00000518954 RUSC2Q8N2Y8 1516 aa13.59□□□□□ -0.23
RUNX1T1-216ENST00000518954 ERCC6L2Q5T890 1561 aa13.57□□□□□ -0.24
RUNX1T1-216ENST00000518954 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
RUNX1T1-216ENST00000518954 PRG4Q92954 1404 aaPredicted RBP13.52□□□□□ -0.25
RUNX1T1-216ENST00000518954 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
RUNX1T1-216ENST00000518954 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
RUNX1T1-216ENST00000518954 JPH4Q96JJ6 628 aa13.49□□□□□ -0.25
RUNX1T1-216ENST00000518954 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
RUNX1T1-216ENST00000518954 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
RUNX1T1-216ENST00000518954 TRHP20396 242 aaPredicted RBP13.42□□□□□ -0.26
RUNX1T1-216ENST00000518954 CTTNBP2Q8WZ74 1663 aa13.41□□□□□ -0.26
RUNX1T1-216ENST00000518954 PRXQ9BXM0 1461 aa13.38□□□□□ -0.27
RUNX1T1-216ENST00000518954 CARMIL2Q6F5E8 1435 aa13.38□□□□□ -0.27
RUNX1T1-216ENST00000518954 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
RUNX1T1-216ENST00000518954 EEA1Q15075 1411 aa13.35□□□□□ -0.27
RUNX1T1-216ENST00000518954 ADCY10Q96PN6 1610 aa13.35□□□□□ -0.27
RUNX1T1-216ENST00000518954 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
RUNX1T1-216ENST00000518954 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
RUNX1T1-216ENST00000518954 PTPRGP23470 1445 aa13.33□□□□□ -0.28
RUNX1T1-216ENST00000518954 KIAA0556O60303 1618 aa13.33□□□□□ -0.28
RUNX1T1-216ENST00000518954 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
RUNX1T1-216ENST00000518954 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
RUNX1T1-216ENST00000518954 TTBK1Q5TCY1 1321 aaPredicted RBP13.33□□□□□ -0.28
RUNX1T1-216ENST00000518954 NPM1P06748 294 aaKnown RBP eCLIP13.3□□□□□ -0.28
RUNX1T1-216ENST00000518954 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
RUNX1T1-216ENST00000518954 GOLGA3Q08378 1498 aa13.28□□□□□ -0.28
RUNX1T1-216ENST00000518954 MAPKBP1O60336 1514 aa13.28□□□□□ -0.28
RUNX1T1-216ENST00000518954 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.29
RUNX1T1-216ENST00000518954 KIF21BO75037 1637 aa13.25□□□□□ -0.29
RUNX1T1-216ENST00000518954 ABCC2Q92887 1545 aa13.24□□□□□ -0.29
RUNX1T1-216ENST00000518954 UACAQ9BZF9 1416 aa13.24□□□□□ -0.29
RUNX1T1-216ENST00000518954 UHRF1BP1LA0JNW5 1464 aa13.23□□□□□ -0.29
RUNX1T1-216ENST00000518954 PPP4R3CPQ6ZMV5 832 aa13.23□□□□□ -0.29
RUNX1T1-216ENST00000518954 DIP2BQ9P265 1576 aa13.22□□□□□ -0.29
RUNX1T1-216ENST00000518954 ABCC10Q5T3U5 1492 aa13.22□□□□□ -0.29
RUNX1T1-216ENST00000518954 SAMD9Q5K651 1589 aa13.2□□□□□ -0.3
RUNX1T1-216ENST00000518954 PLB1Q6P1J6 1458 aa13.18□□□□□ -0.3
RUNX1T1-216ENST00000518954 ZCCHC11Q5TAX3 1644 aaKnown RBP13.18□□□□□ -0.3
RUNX1T1-216ENST00000518954 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
RUNX1T1-216ENST00000518954 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
RUNX1T1-216ENST00000518954 ABCA8O94911 1581 aa13.17□□□□□ -0.3
RUNX1T1-216ENST00000518954 ASXL2Q76L83 1435 aa13.16□□□□□ -0.3
RUNX1T1-216ENST00000518954 RANGAP1P46060 587 aaPredicted RBP13.15□□□□□ -0.3
RUNX1T1-216ENST00000518954 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
RUNX1T1-216ENST00000518954 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
RUNX1T1-216ENST00000518954 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
RUNX1T1-216ENST00000518954 UBTFP17480 764 aaKnown RBP13.11□□□□□ -0.31
RUNX1T1-216ENST00000518954 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
RUNX1T1-216ENST00000518954 GLI2P10070 1586 aa13.11□□□□□ -0.31
RUNX1T1-216ENST00000518954 RAPGEF6Q8TEU7 1601 aa13.1□□□□□ -0.31
RUNX1T1-216ENST00000518954 NCBP3Q53F19 620 aaKnown RBP13.1□□□□□ -0.31
RUNX1T1-216ENST00000518954 FHOD3Q2V2M9 1422 aa13.1□□□□□ -0.31
RUNX1T1-216ENST00000518954 WDR7Q9Y4E6 1490 aa13.1□□□□□ -0.31
RUNX1T1-216ENST00000518954 EPRSP07814 1512 aaKnown RBP13.08□□□□□ -0.31
RUNX1T1-216ENST00000518954 MAP3K4Q9Y6R4 1608 aa13.06□□□□□ -0.32
RUNX1T1-216ENST00000518954 ARID3CA6NKF2 412 aa13.06□□□□□ -0.32
RUNX1T1-216ENST00000518954 PPRC1Q5VV67 1664 aaKnown RBP13.05□□□□□ -0.32
RUNX1T1-216ENST00000518954 KDM6BO15054 1643 aa13.05□□□□□ -0.32
RUNX1T1-216ENST00000518954 ATP10BO94823 1461 aa13.04□□□□□ -0.32
RUNX1T1-216ENST00000518954 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
RUNX1T1-216ENST00000518954 CFAP43Q8NDM7 1665 aa13.02□□□□□ -0.32
RUNX1T1-216ENST00000518954 ARHGAP35Q9NRY4 1499 aa13.01□□□□□ -0.33
RUNX1T1-216ENST00000518954 TEX14Q8IWB6 1497 aa13□□□□□ -0.33
RUNX1T1-216ENST00000518954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
RUNX1T1-216ENST00000518954 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
RUNX1T1-216ENST00000518954 KCNH8Q96L42 1107 aa13□□□□□ -0.33
RUNX1T1-216ENST00000518954 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
RUNX1T1-216ENST00000518954 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
RUNX1T1-216ENST00000518954 CD109Q6YHK3 1445 aa12.96□□□□□ -0.33
RUNX1T1-216ENST00000518954 ABCA9Q8IUA7 1624 aa12.95□□□□□ -0.34
RUNX1T1-216ENST00000518954 MAGI3Q5TCQ9 1506 aa12.95□□□□□ -0.34
RUNX1T1-216ENST00000518954 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
RUNX1T1-216ENST00000518954 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
RUNX1T1-216ENST00000518954 CLIP1P30622 1438 aa12.91□□□□□ -0.34
RUNX1T1-216ENST00000518954 PLEKHD1A6NEE1 506 aa12.91□□□□□ -0.34
RUNX1T1-216ENST00000518954 COL17A1Q9UMD9 1497 aaPredicted RBP12.9□□□□□ -0.34
RUNX1T1-216ENST00000518954 PCF11O94913 1555 aaKnown RBP12.9□□□□□ -0.35
RUNX1T1-216ENST00000518954 LRRIQ1Q96JM4 1722 aa12.89□□□□□ -0.35
RUNX1T1-216ENST00000518954 TTC37Q6PGP7 1564 aa12.87□□□□□ -0.35
RUNX1T1-216ENST00000518954 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
RUNX1T1-216ENST00000518954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.86□□□□□ -0.35
RUNX1T1-216ENST00000518954 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
RUNX1T1-216ENST00000518954 CCDC18Q5T9S5 1454 aa12.85□□□□□ -0.35
RUNX1T1-216ENST00000518954 NEO1Q92859 1461 aa12.85□□□□□ -0.35
RUNX1T1-216ENST00000518954 CDK11AQ9UQ88 783 aaPredicted RBP12.84□□□□□ -0.35
RUNX1T1-216ENST00000518954 FYCO1Q9BQS8 1478 aa12.84□□□□□ -0.35
RUNX1T1-216ENST00000518954 KIF14Q15058 1648 aa12.84□□□□□ -0.35
RUNX1T1-216ENST00000518954 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.35
RUNX1T1-216ENST00000518954 CFAP74Q9C0B2 1584 aa12.83□□□□□ -0.36
RUNX1T1-216ENST00000518954 PHLDB1Q86UU1 1377 aa12.82□□□□□ -0.36
RUNX1T1-216ENST00000518954 CEP162Q5TB80 1403 aa12.82□□□□□ -0.36
RUNX1T1-216ENST00000518954 MYO5CQ9NQX4 1742 aa12.82□□□□□ -0.36
RUNX1T1-216ENST00000518954 TROQ12816 1431 aaPredicted RBP12.81□□□□□ -0.36
RUNX1T1-216ENST00000518954 FANCAO15360 1455 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms