RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 IGF1RP08069 1367 aa31.54■■■□□ 2.64
TFF3-204ENST00000518498 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
TFF3-204ENST00000518498 KIF27Q86VH2 1401 aa31.49■■■□□ 2.63
TFF3-204ENST00000518498 KIAA0586Q9BVV6 1533 aa31.45■■■□□ 2.63
TFF3-204ENST00000518498 KIF13AQ9H1H9 1805 aa31.45■■■□□ 2.63
TFF3-204ENST00000518498 FAM69CQ0P6D2 419 aa31.43■■■□□ 2.62
TFF3-204ENST00000518498 CUL7Q14999 1698 aa31.38■■■□□ 2.61
TFF3-204ENST00000518498 ABCC10Q5T3U5 1492 aa31.37■■■□□ 2.61
TFF3-204ENST00000518498 MAPKBP1O60336 1514 aa31.33■■■□□ 2.61
TFF3-204ENST00000518498 CARMIL1Q5VZK9 1371 aa31.32■■■□□ 2.6
TFF3-204ENST00000518498 ADCY10Q96PN6 1610 aa31.32■■■□□ 2.6
TFF3-204ENST00000518498 PTPRGP23470 1445 aa31.24■■■□□ 2.59
TFF3-204ENST00000518498 TTBK1Q5TCY1 1321 aaPredicted RBP31.22■■■□□ 2.59
TFF3-204ENST00000518498 DIP2BQ9P265 1576 aa31.22■■■□□ 2.59
TFF3-204ENST00000518498 CARMIL2Q6F5E8 1435 aa31.18■■■□□ 2.58
TFF3-204ENST00000518498 TNIKQ9UKE5 1360 aa31.16■■■□□ 2.58
TFF3-204ENST00000518498 IQGAP2Q13576 1575 aa31.08■■■□□ 2.57
TFF3-204ENST00000518498 ABCC2Q92887 1545 aa31.03■■■□□ 2.56
TFF3-204ENST00000518498 KDM6BO15054 1643 aa31.03■■■□□ 2.56
TFF3-204ENST00000518498 TSPOAP1O95153 1857 aa31.03■■■□□ 2.56
TFF3-204ENST00000518498 RAPGEF2Q9Y4G8 1499 aa30.98■■■□□ 2.55
TFF3-204ENST00000518498 UACAQ9BZF9 1416 aa30.98■■■□□ 2.55
TFF3-204ENST00000518498 UHRF1BP1LA0JNW5 1464 aa30.97■■■□□ 2.55
TFF3-204ENST00000518498 PLB1Q6P1J6 1458 aa30.97■■■□□ 2.55
TFF3-204ENST00000518498 ASXL2Q76L83 1435 aa30.97■■■□□ 2.55
TFF3-204ENST00000518498 DISP1Q96F81 1524 aa30.96■■■□□ 2.55
TFF3-204ENST00000518498 UGGT2Q9NYU1 1516 aa30.89■■■□□ 2.54
TFF3-204ENST00000518498 KDM4FA0A1W2PPD8 638 aa30.89■■■□□ 2.54
TFF3-204ENST00000518498 GLI2P10070 1586 aa30.88■■■□□ 2.53
TFF3-204ENST00000518498 KDM5BQ9UGL1 1544 aa30.83■■■□□ 2.53
TFF3-204ENST00000518498 KIAA0556O60303 1618 aa30.78■■■□□ 2.52
TFF3-204ENST00000518498 PPRC1Q5VV67 1664 aaKnown RBP30.77■■■□□ 2.52
TFF3-204ENST00000518498 EPRSP07814 1512 aaKnown RBP30.77■■■□□ 2.52
TFF3-204ENST00000518498 ZCCHC11Q5TAX3 1644 aaKnown RBP30.73■■■□□ 2.51
TFF3-204ENST00000518498 MAP3K4Q9Y6R4 1608 aa30.68■■■□□ 2.5
TFF3-204ENST00000518498 GOLGA3Q08378 1498 aa30.67■■■□□ 2.5
TFF3-204ENST00000518498 TEX14Q8IWB6 1497 aa30.66■■■□□ 2.5
TFF3-204ENST00000518498 CTTNBP2Q8WZ74 1663 aa30.65■■■□□ 2.5
TFF3-204ENST00000518498 COL17A1Q9UMD9 1497 aaPredicted RBP30.65■■■□□ 2.5
TFF3-204ENST00000518498 WDR7Q9Y4E6 1490 aa30.62■■■□□ 2.49
TFF3-204ENST00000518498 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
TFF3-204ENST00000518498 KCNH8Q96L42 1107 aa30.58■■■□□ 2.49
TFF3-204ENST00000518498 FAM9AQ8IZU1 332 aaPredicted RBP30.56■■■□□ 2.48
TFF3-204ENST00000518498 ABCA8O94911 1581 aa30.54■■■□□ 2.48
TFF3-204ENST00000518498 ADGRL1O94910 1474 aa30.53■■■□□ 2.48
TFF3-204ENST00000518498 CD109Q6YHK3 1445 aa30.5■■■□□ 2.47
TFF3-204ENST00000518498 P3H3Q8IVL6 736 aa30.46■■■□□ 2.47
TFF3-204ENST00000518498 MAGI3Q5TCQ9 1506 aa30.45■■■□□ 2.47
TFF3-204ENST00000518498 CFAP43Q8NDM7 1665 aa30.42■■■□□ 2.46
TFF3-204ENST00000518498 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
TFF3-204ENST00000518498 ARID3CA6NKF2 412 aa30.39■■■□□ 2.46
TFF3-204ENST00000518498 ATP10BO94823 1461 aa30.34■■■□□ 2.45
TFF3-204ENST00000518498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.24■■■□□ 2.43
TFF3-204ENST00000518498 HNRNPUL2Q1KMD3 747 aaKnown RBP30.24■■■□□ 2.43
TFF3-204ENST00000518498 ARAP3Q8WWN8 1544 aa30.22■■■□□ 2.43
TFF3-204ENST00000518498 SAMD9Q5K651 1589 aa30.22■■■□□ 2.43
TFF3-204ENST00000518498 PHLDB1Q86UU1 1377 aa30.2■■■□□ 2.43
TFF3-204ENST00000518498 RANGAP1P46060 587 aaPredicted RBP30.2■■■□□ 2.43
TFF3-204ENST00000518498 EEA1Q15075 1411 aa30.17■■■□□ 2.42
TFF3-204ENST00000518498 RAPGEF6Q8TEU7 1601 aa30.17■■■□□ 2.42
TFF3-204ENST00000518498 ABCA9Q8IUA7 1624 aa30.16■■■□□ 2.42
TFF3-204ENST00000518498 ILDR1Q86SU0 546 aaPredicted RBP30.15■■■□□ 2.42
TFF3-204ENST00000518498 HECW2Q9P2P5 1572 aa30.14■■■□□ 2.42
TFF3-204ENST00000518498 KIF21BO75037 1637 aa30.11■■■□□ 2.41
TFF3-204ENST00000518498 RAPGEF3O95398 923 aa30.1■■■□□ 2.41
TFF3-204ENST00000518498 CHIC1Q5VXU3 224 aa30.09■■■□□ 2.41
TFF3-204ENST00000518498 PLEKHD1A6NEE1 506 aa30.07■■■□□ 2.4
TFF3-204ENST00000518498 NUP153P49790 1475 aaKnown RBP30.06■■■□□ 2.4
TFF3-204ENST00000518498 NEO1Q92859 1461 aa30.06■■■□□ 2.4
TFF3-204ENST00000518498 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
TFF3-204ENST00000518498 ARID4BQ4LE39 1312 aaPredicted RBP29.94■■■□□ 2.38
TFF3-204ENST00000518498 EFCAB5A4FU69 1503 aa29.91■■■□□ 2.38
TFF3-204ENST00000518498 ADAMTSL3P82987 1691 aa29.89■■■□□ 2.38
TFF3-204ENST00000518498 PTPRMP28827 1452 aa29.89■■■□□ 2.38
TFF3-204ENST00000518498 FRMPD1Q5SYB0 1578 aa29.88■■■□□ 2.37
TFF3-204ENST00000518498 AKNAQ7Z591 1439 aa29.88■■■□□ 2.37
TFF3-204ENST00000518498 DENND4BO75064 1496 aaPredicted RBP29.87■■■□□ 2.37
TFF3-204ENST00000518498 UBTFP17480 764 aaKnown RBP29.84■■■□□ 2.37
TFF3-204ENST00000518498 FANCAO15360 1455 aa29.84■■■□□ 2.37
TFF3-204ENST00000518498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.84■■■□□ 2.37
TFF3-204ENST00000518498 EHMT2Q96KQ7 1210 aa29.82■■■□□ 2.36
TFF3-204ENST00000518498 BCORL1Q5H9F3 1711 aa29.81■■■□□ 2.36
TFF3-204ENST00000518498 CFAP74Q9C0B2 1584 aa29.79■■■□□ 2.36
TFF3-204ENST00000518498 ATP1B4Q9UN42 357 aaPredicted RBP29.79■■■□□ 2.36
TFF3-204ENST00000518498 RICTORQ6R327 1708 aa29.76■■■□□ 2.36
TFF3-204ENST00000518498 CDK13Q14004 1512 aaKnown RBP29.75■■■□□ 2.35
TFF3-204ENST00000518498 TTC37Q6PGP7 1564 aa29.74■■■□□ 2.35
TFF3-204ENST00000518498 MADDQ8WXG6 1647 aa29.74■■■□□ 2.35
TFF3-204ENST00000518498 ARHGEF40Q8TER5 1519 aa29.73■■■□□ 2.35
TFF3-204ENST00000518498 PLCH2O75038 1416 aa29.71■■■□□ 2.35
TFF3-204ENST00000518498 FMN1Q68DA7 1419 aa29.71■■■□□ 2.35
TFF3-204ENST00000518498 CDK11AQ9UQ88 783 aaPredicted RBP29.7■■■□□ 2.35
TFF3-204ENST00000518498 POGZQ7Z3K3 1410 aa29.69■■■□□ 2.34
TFF3-204ENST00000518498 SCAPERQ9BY12 1400 aa29.67■■■□□ 2.34
TFF3-204ENST00000518498 MAGI2Q86UL8 1455 aa29.67■■■□□ 2.34
TFF3-204ENST00000518498 ZMYM4Q5VZL5 1548 aa29.66■■■□□ 2.34
TFF3-204ENST00000518498 YEATS2Q9ULM3 1422 aa29.65■■■□□ 2.34
TFF3-204ENST00000518498 EFCAB2Q5VUJ9 269 aa29.65■■■□□ 2.34
TFF3-204ENST00000518498 ZFYVE16Q7Z3T8 1539 aa29.65■■■□□ 2.34
TFF3-204ENST00000518498 ARHGAP35Q9NRY4 1499 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 527.2 ms