RNA–Protein interactions for RNA: ENST00000518387.1

CTD-2270F17.1-201, humanhuman

TSL 1 (best) BASIC

Gene CTD-2270F17.1, Length 1,215 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-2270F17.1-201ENST00000518387 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
CTD-2270F17.1-201ENST00000518387 FHAD1B1AJZ9 1412 aa18.51■□□□□ 0.55
CTD-2270F17.1-201ENST00000518387 ARHGEF11O15085 1522 aa18.51■□□□□ 0.55
CTD-2270F17.1-201ENST00000518387 CEP170Q5SW79 1584 aa18.48■□□□□ 0.55
CTD-2270F17.1-201ENST00000518387 CUL7Q14999 1698 aa18.47■□□□□ 0.55
CTD-2270F17.1-201ENST00000518387 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
CTD-2270F17.1-201ENST00000518387 IGF1RP08069 1367 aa18.41■□□□□ 0.54
CTD-2270F17.1-201ENST00000518387 NUP160Q12769 1436 aa18.4■□□□□ 0.54
CTD-2270F17.1-201ENST00000518387 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
CTD-2270F17.1-201ENST00000518387 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
CTD-2270F17.1-201ENST00000518387 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.53
CTD-2270F17.1-201ENST00000518387 SHROOM2Q13796 1616 aa18.33■□□□□ 0.52
CTD-2270F17.1-201ENST00000518387 ERCC6L2Q5T890 1561 aa18.32■□□□□ 0.52
CTD-2270F17.1-201ENST00000518387 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
CTD-2270F17.1-201ENST00000518387 PPP4R3CPQ6ZMV5 832 aa18.27■□□□□ 0.52
CTD-2270F17.1-201ENST00000518387 RAPGEF2Q9Y4G8 1499 aa18.24■□□□□ 0.51
CTD-2270F17.1-201ENST00000518387 KIAA0586Q9BVV6 1533 aa18.22■□□□□ 0.51
CTD-2270F17.1-201ENST00000518387 PRG4Q92954 1404 aaPredicted RBP18.22■□□□□ 0.51
CTD-2270F17.1-201ENST00000518387 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
CTD-2270F17.1-201ENST00000518387 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
CTD-2270F17.1-201ENST00000518387 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
CTD-2270F17.1-201ENST00000518387 FAM9AQ8IZU1 332 aaPredicted RBP18.16■□□□□ 0.5
CTD-2270F17.1-201ENST00000518387 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
CTD-2270F17.1-201ENST00000518387 PRXQ9BXM0 1461 aa18.14■□□□□ 0.5
CTD-2270F17.1-201ENST00000518387 EEA1Q15075 1411 aa18.12■□□□□ 0.49
CTD-2270F17.1-201ENST00000518387 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
CTD-2270F17.1-201ENST00000518387 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
CTD-2270F17.1-201ENST00000518387 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
CTD-2270F17.1-201ENST00000518387 UGGT2Q9NYU1 1516 aa18.04■□□□□ 0.48
CTD-2270F17.1-201ENST00000518387 KIAA0556O60303 1618 aa18.04■□□□□ 0.48
CTD-2270F17.1-201ENST00000518387 DISP1Q96F81 1524 aa18.03■□□□□ 0.48
CTD-2270F17.1-201ENST00000518387 KIF21BO75037 1637 aa18.02■□□□□ 0.48
CTD-2270F17.1-201ENST00000518387 ADCY10Q96PN6 1610 aa18.01■□□□□ 0.47
CTD-2270F17.1-201ENST00000518387 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
CTD-2270F17.1-201ENST00000518387 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
CTD-2270F17.1-201ENST00000518387 TNIKQ9UKE5 1360 aa17.97■□□□□ 0.47
CTD-2270F17.1-201ENST00000518387 PTPRGP23470 1445 aa17.97■□□□□ 0.47
CTD-2270F17.1-201ENST00000518387 GOLGA3Q08378 1498 aa17.94■□□□□ 0.46
CTD-2270F17.1-201ENST00000518387 CNKSR2Q8WXI2 1034 aa17.92■□□□□ 0.46
CTD-2270F17.1-201ENST00000518387 RANGAP1P46060 587 aaPredicted RBP17.91■□□□□ 0.46
CTD-2270F17.1-201ENST00000518387 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 KIF13AQ9H1H9 1805 aa17.88■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 ABCC2Q92887 1545 aa17.86■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 CACNB1Q02641 598 aaPredicted RBP17.85■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 UACAQ9BZF9 1416 aa17.85■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 MAPKBP1O60336 1514 aa17.83■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 PLB1Q6P1J6 1458 aa17.83■□□□□ 0.45
CTD-2270F17.1-201ENST00000518387 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
CTD-2270F17.1-201ENST00000518387 UHRF1BP1LA0JNW5 1464 aa17.82■□□□□ 0.44
CTD-2270F17.1-201ENST00000518387 ABCA8O94911 1581 aa17.79■□□□□ 0.44
CTD-2270F17.1-201ENST00000518387 DIP2BQ9P265 1576 aa17.79■□□□□ 0.44
CTD-2270F17.1-201ENST00000518387 EFCAB5A4FU69 1503 aa17.78■□□□□ 0.44
CTD-2270F17.1-201ENST00000518387 FHOD3Q2V2M9 1422 aa17.78■□□□□ 0.44
CTD-2270F17.1-201ENST00000518387 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 KDM5BQ9UGL1 1544 aa17.75■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 RAPGEF6Q8TEU7 1601 aa17.75■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 ABCC10Q5T3U5 1492 aa17.75■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 RNF216Q9NWF9 866 aaPredicted RBP17.74■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 ASXL2Q76L83 1435 aa17.73■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 ARID3CA6NKF2 412 aa17.72■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 FAM69CQ0P6D2 419 aa17.71■□□□□ 0.43
CTD-2270F17.1-201ENST00000518387 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
CTD-2270F17.1-201ENST00000518387 WDR7Q9Y4E6 1490 aa17.64■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 EPRSP07814 1512 aaKnown RBP17.62■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 ATP10BO94823 1461 aa17.62■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 GLI2P10070 1586 aa17.62■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.6■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 HNRNPUL2Q1KMD3 747 aaKnown RBP17.6■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 HECW1Q76N89 1606 aa17.59■□□□□ 0.41
CTD-2270F17.1-201ENST00000518387 FMN1Q68DA7 1419 aa17.57■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 KCNH8Q96L42 1107 aa17.57■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 CLIP1P30622 1438 aa17.56■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 CFAP43Q8NDM7 1665 aa17.56■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 CDK13Q14004 1512 aaKnown RBP17.56■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 LRRIQ1Q96JM4 1722 aa17.55■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 KDM6BO15054 1643 aa17.54■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 RNF39Q9H2S5 420 aa17.52■□□□□ 0.4
CTD-2270F17.1-201ENST00000518387 CEP162Q5TB80 1403 aa17.49■□□□□ 0.39
CTD-2270F17.1-201ENST00000518387 LOC105371045A0A1W2PR82 267 aa17.49■□□□□ 0.39
CTD-2270F17.1-201ENST00000518387 ABCA9Q8IUA7 1624 aa17.48■□□□□ 0.39
CTD-2270F17.1-201ENST00000518387 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
CTD-2270F17.1-201ENST00000518387 CD109Q6YHK3 1445 aa17.47■□□□□ 0.39
CTD-2270F17.1-201ENST00000518387 PLEKHD1A6NEE1 506 aa17.44■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 CASKIN1Q8WXD9 1431 aa17.44■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 TTC37Q6PGP7 1564 aa17.43■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 FYCO1Q9BQS8 1478 aa17.43■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 MAGI3Q5TCQ9 1506 aa17.42■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTD-2270F17.1-201ENST00000518387 KIF14Q15058 1648 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms