RNA–Protein interactions for RNA: ENST00000518343.5

MSR1-208, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 4

Gene MSR1, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-208ENST00000518343 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
MSR1-208ENST00000518343 NUP160Q12769 1436 aa10.28□□□□□ -0.76
MSR1-208ENST00000518343 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
MSR1-208ENST00000518343 SHROOM2Q13796 1616 aa10.26□□□□□ -0.77
MSR1-208ENST00000518343 FHAD1B1AJZ9 1412 aa10.26□□□□□ -0.77
MSR1-208ENST00000518343 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
MSR1-208ENST00000518343 CEP170Q5SW79 1584 aa10.26□□□□□ -0.77
MSR1-208ENST00000518343 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
MSR1-208ENST00000518343 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
MSR1-208ENST00000518343 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
MSR1-208ENST00000518343 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
MSR1-208ENST00000518343 RNF39Q9H2S5 420 aa10.22□□□□□ -0.77
MSR1-208ENST00000518343 KIF13AQ9H1H9 1805 aa10.19□□□□□ -0.78
MSR1-208ENST00000518343 MAPKBP1O60336 1514 aa10.19□□□□□ -0.78
MSR1-208ENST00000518343 TOP2BQ02880 1626 aa10.18□□□□□ -0.78
MSR1-208ENST00000518343 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
MSR1-208ENST00000518343 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
MSR1-208ENST00000518343 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
MSR1-208ENST00000518343 JPH4Q96JJ6 628 aa10.17□□□□□ -0.78
MSR1-208ENST00000518343 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
MSR1-208ENST00000518343 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.78
MSR1-208ENST00000518343 DIP2BQ9P265 1576 aa10.11□□□□□ -0.79
MSR1-208ENST00000518343 KDM6BO15054 1643 aa10.11□□□□□ -0.79
MSR1-208ENST00000518343 RUSC2Q8N2Y8 1516 aa10.1□□□□□ -0.79
MSR1-208ENST00000518343 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
MSR1-208ENST00000518343 CNKSR2Q8WXI2 1034 aa10.08□□□□□ -0.8
MSR1-208ENST00000518343 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
MSR1-208ENST00000518343 ADCY10Q96PN6 1610 aa10.06□□□□□ -0.8
MSR1-208ENST00000518343 CUL7Q14999 1698 aa10.06□□□□□ -0.8
MSR1-208ENST00000518343 CARMIL2Q6F5E8 1435 aa10.05□□□□□ -0.8
MSR1-208ENST00000518343 PLB1Q6P1J6 1458 aa10.04□□□□□ -0.8
MSR1-208ENST00000518343 KDM4FA0A1W2PPD8 638 aa10.03□□□□□ -0.8
MSR1-208ENST00000518343 GLI2P10070 1586 aa10.02□□□□□ -0.81
MSR1-208ENST00000518343 PTPRGP23470 1445 aa10.02□□□□□ -0.81
MSR1-208ENST00000518343 KIF27Q86VH2 1401 aa10.02□□□□□ -0.81
MSR1-208ENST00000518343 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
MSR1-208ENST00000518343 ABCC2Q92887 1545 aa10.01□□□□□ -0.81
MSR1-208ENST00000518343 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
MSR1-208ENST00000518343 TSPOAP1O95153 1857 aa10□□□□□ -0.81
MSR1-208ENST00000518343 UHRF1BP1LA0JNW5 1464 aa9.99□□□□□ -0.81
MSR1-208ENST00000518343 SUPT5HO00267 1087 aaKnown RBP9.99□□□□□ -0.81
MSR1-208ENST00000518343 C1QBPQ07021 282 aaKnown RBP9.98□□□□□ -0.81
MSR1-208ENST00000518343 IGF1RP08069 1367 aa9.98□□□□□ -0.81
MSR1-208ENST00000518343 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
MSR1-208ENST00000518343 ASXL2Q76L83 1435 aa9.96□□□□□ -0.82
MSR1-208ENST00000518343 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
MSR1-208ENST00000518343 UACAQ9BZF9 1416 aa9.94□□□□□ -0.82
MSR1-208ENST00000518343 IQGAP2Q13576 1575 aa9.93□□□□□ -0.82
MSR1-208ENST00000518343 CARMIL1Q5VZK9 1371 aa9.93□□□□□ -0.82
MSR1-208ENST00000518343 KDM5BQ9UGL1 1544 aa9.92□□□□□ -0.82
MSR1-208ENST00000518343 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
MSR1-208ENST00000518343 MAP3K4Q9Y6R4 1608 aa9.91□□□□□ -0.82
MSR1-208ENST00000518343 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.82
MSR1-208ENST00000518343 EPRSP07814 1512 aaKnown RBP9.9□□□□□ -0.82
MSR1-208ENST00000518343 HECW2Q9P2P5 1572 aa9.87□□□□□ -0.83
MSR1-208ENST00000518343 UGGT2Q9NYU1 1516 aa9.87□□□□□ -0.83
MSR1-208ENST00000518343 WDR7Q9Y4E6 1490 aa9.86□□□□□ -0.83
MSR1-208ENST00000518343 MAGI3Q5TCQ9 1506 aa9.86□□□□□ -0.83
MSR1-208ENST00000518343 PHLDB1Q86UU1 1377 aa9.86□□□□□ -0.83
MSR1-208ENST00000518343 DISP1Q96F81 1524 aa9.85□□□□□ -0.83
MSR1-208ENST00000518343 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
MSR1-208ENST00000518343 CFAP43Q8NDM7 1665 aa9.84□□□□□ -0.83
MSR1-208ENST00000518343 ZCCHC11Q5TAX3 1644 aaKnown RBP9.84□□□□□ -0.83
MSR1-208ENST00000518343 RAPGEF2Q9Y4G8 1499 aa9.84□□□□□ -0.83
MSR1-208ENST00000518343 FBXO41Q8TF61 875 aa9.83□□□□□ -0.84
MSR1-208ENST00000518343 TTBK1Q5TCY1 1321 aaPredicted RBP9.82□□□□□ -0.84
MSR1-208ENST00000518343 KIAA0556O60303 1618 aa9.82□□□□□ -0.84
MSR1-208ENST00000518343 CD109Q6YHK3 1445 aa9.82□□□□□ -0.84
MSR1-208ENST00000518343 COL17A1Q9UMD9 1497 aaPredicted RBP9.81□□□□□ -0.84
MSR1-208ENST00000518343 ARAP3Q8WWN8 1544 aa9.79□□□□□ -0.84
MSR1-208ENST00000518343 CTTNBP2Q8WZ74 1663 aa9.75□□□□□ -0.85
MSR1-208ENST00000518343 ABCA8O94911 1581 aa9.74□□□□□ -0.85
MSR1-208ENST00000518343 NEO1Q92859 1461 aa9.72□□□□□ -0.85
MSR1-208ENST00000518343 NPM3O75607 178 aaKnown RBP9.72□□□□□ -0.85
MSR1-208ENST00000518343 NCBP3Q53F19 620 aaKnown RBP9.71□□□□□ -0.86
MSR1-208ENST00000518343 KCNH8Q96L42 1107 aa9.71□□□□□ -0.86
MSR1-208ENST00000518343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.71□□□□□ -0.86
MSR1-208ENST00000518343 PTPRMP28827 1452 aa9.71□□□□□ -0.86
MSR1-208ENST00000518343 KIF21BO75037 1637 aa9.7□□□□□ -0.86
MSR1-208ENST00000518343 ABCA9Q8IUA7 1624 aa9.7□□□□□ -0.86
MSR1-208ENST00000518343 ADAMTSL3P82987 1691 aa9.7□□□□□ -0.86
MSR1-208ENST00000518343 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
MSR1-208ENST00000518343 POGZQ7Z3K3 1410 aa9.68□□□□□ -0.86
MSR1-208ENST00000518343 CFAP74Q9C0B2 1584 aa9.66□□□□□ -0.86
MSR1-208ENST00000518343 BCORL1Q5H9F3 1711 aa9.65□□□□□ -0.86
MSR1-208ENST00000518343 ARID4BQ4LE39 1312 aaPredicted RBP9.65□□□□□ -0.86
MSR1-208ENST00000518343 FANCAO15360 1455 aa9.64□□□□□ -0.87
MSR1-208ENST00000518343 ATP10BO94823 1461 aa9.64□□□□□ -0.87
MSR1-208ENST00000518343 MAGI2Q86UL8 1455 aa9.64□□□□□ -0.87
MSR1-208ENST00000518343 PRXQ9BXM0 1461 aa9.64□□□□□ -0.87
MSR1-208ENST00000518343 LMTK3Q96Q04 1460 aa9.62□□□□□ -0.87
MSR1-208ENST00000518343 AKNAQ7Z591 1439 aa9.62□□□□□ -0.87
MSR1-208ENST00000518343 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
MSR1-208ENST00000518343 DENND4BO75064 1496 aaPredicted RBP9.61□□□□□ -0.87
MSR1-208ENST00000518343 FHOD3Q2V2M9 1422 aa9.61□□□□□ -0.87
MSR1-208ENST00000518343 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
MSR1-208ENST00000518343 RAPGEF6Q8TEU7 1601 aa9.6□□□□□ -0.87
MSR1-208ENST00000518343 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
MSR1-208ENST00000518343 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
MSR1-208ENST00000518343 RAPGEF3O95398 923 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms