RNA–Protein interactions for RNA: ENST00000518321.5

TVP23C-205, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23C, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-205ENST00000518321 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.51
TVP23C-205ENST00000518321 KIF27Q86VH2 1401 aa24.45■■□□□ 1.51
TVP23C-205ENST00000518321 IGF1RP08069 1367 aa24.42■■□□□ 1.5
TVP23C-205ENST00000518321 CUL7Q14999 1698 aa24.4■■□□□ 1.5
TVP23C-205ENST00000518321 KIAA0586Q9BVV6 1533 aa24.35■■□□□ 1.49
TVP23C-205ENST00000518321 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
TVP23C-205ENST00000518321 CARMIL1Q5VZK9 1371 aa24.28■■□□□ 1.48
TVP23C-205ENST00000518321 KIF13AQ9H1H9 1805 aa24.25■■□□□ 1.47
TVP23C-205ENST00000518321 ADCY10Q96PN6 1610 aa24.21■■□□□ 1.47
TVP23C-205ENST00000518321 MAPKBP1O60336 1514 aa24.19■■□□□ 1.46
TVP23C-205ENST00000518321 ABCC10Q5T3U5 1492 aa24.18■■□□□ 1.46
TVP23C-205ENST00000518321 FAM69CQ0P6D2 419 aa24.17■■□□□ 1.46
TVP23C-205ENST00000518321 CARMIL2Q6F5E8 1435 aa24.14■■□□□ 1.45
TVP23C-205ENST00000518321 PTPRGP23470 1445 aa24.13■■□□□ 1.45
TVP23C-205ENST00000518321 IQGAP2Q13576 1575 aa24.12■■□□□ 1.45
TVP23C-205ENST00000518321 DIP2BQ9P265 1576 aa24.11■■□□□ 1.45
TVP23C-205ENST00000518321 TNIKQ9UKE5 1360 aa24.09■■□□□ 1.45
TVP23C-205ENST00000518321 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
TVP23C-205ENST00000518321 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
TVP23C-205ENST00000518321 PHF23Q9BUL5 403 aaPredicted RBP24.03■■□□□ 1.44
TVP23C-205ENST00000518321 ABCC2Q92887 1545 aa24■■□□□ 1.43
TVP23C-205ENST00000518321 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
TVP23C-205ENST00000518321 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
TVP23C-205ENST00000518321 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
TVP23C-205ENST00000518321 UHRF1BP1LA0JNW5 1464 aa23.95■■□□□ 1.42
TVP23C-205ENST00000518321 UACAQ9BZF9 1416 aa23.94■■□□□ 1.42
TVP23C-205ENST00000518321 TSPOAP1O95153 1857 aa23.93■■□□□ 1.42
TVP23C-205ENST00000518321 PLB1Q6P1J6 1458 aa23.92■■□□□ 1.42
TVP23C-205ENST00000518321 ASXL2Q76L83 1435 aa23.91■■□□□ 1.42
TVP23C-205ENST00000518321 KDM6BO15054 1643 aa23.91■■□□□ 1.42
TVP23C-205ENST00000518321 KIAA0556O60303 1618 aa23.89■■□□□ 1.42
TVP23C-205ENST00000518321 GLI2P10070 1586 aa23.85■■□□□ 1.41
TVP23C-205ENST00000518321 CTTNBP2Q8WZ74 1663 aa23.85■■□□□ 1.41
TVP23C-205ENST00000518321 KDM5BQ9UGL1 1544 aa23.84■■□□□ 1.41
TVP23C-205ENST00000518321 GOLGA3Q08378 1498 aa23.8■■□□□ 1.4
TVP23C-205ENST00000518321 PRXQ9BXM0 1461 aa23.8■■□□□ 1.4
TVP23C-205ENST00000518321 ZCCHC11Q5TAX3 1644 aaKnown RBP23.78■■□□□ 1.4
TVP23C-205ENST00000518321 EPRSP07814 1512 aaKnown RBP23.76■■□□□ 1.39
TVP23C-205ENST00000518321 PPRC1Q5VV67 1664 aaKnown RBP23.75■■□□□ 1.39
TVP23C-205ENST00000518321 MAP3K4Q9Y6R4 1608 aa23.7■■□□□ 1.39
TVP23C-205ENST00000518321 WDR7Q9Y4E6 1490 aa23.68■■□□□ 1.38
TVP23C-205ENST00000518321 TEX14Q8IWB6 1497 aa23.68■■□□□ 1.38
TVP23C-205ENST00000518321 ABCA8O94911 1581 aa23.67■■□□□ 1.38
TVP23C-205ENST00000518321 KDM4FA0A1W2PPD8 638 aa23.65■■□□□ 1.38
TVP23C-205ENST00000518321 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
TVP23C-205ENST00000518321 CSRNP3Q8WYN3 585 aa23.63■■□□□ 1.37
TVP23C-205ENST00000518321 COL17A1Q9UMD9 1497 aaPredicted RBP23.6■■□□□ 1.37
TVP23C-205ENST00000518321 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
TVP23C-205ENST00000518321 P3H3Q8IVL6 736 aa23.55■■□□□ 1.36
TVP23C-205ENST00000518321 CD109Q6YHK3 1445 aa23.55■■□□□ 1.36
TVP23C-205ENST00000518321 CFAP43Q8NDM7 1665 aa23.54■■□□□ 1.36
TVP23C-205ENST00000518321 EEA1Q15075 1411 aa23.54■■□□□ 1.36
TVP23C-205ENST00000518321 MAGI3Q5TCQ9 1506 aa23.52■■□□□ 1.36
TVP23C-205ENST00000518321 SAMD9Q5K651 1589 aa23.5■■□□□ 1.35
TVP23C-205ENST00000518321 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
TVP23C-205ENST00000518321 ATP10BO94823 1461 aa23.47■■□□□ 1.35
TVP23C-205ENST00000518321 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
TVP23C-205ENST00000518321 RAPGEF6Q8TEU7 1601 aa23.42■■□□□ 1.34
TVP23C-205ENST00000518321 RANGAP1P46060 587 aaPredicted RBP23.39■■□□□ 1.33
TVP23C-205ENST00000518321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.37■■□□□ 1.33
TVP23C-205ENST00000518321 HNRNPUL2Q1KMD3 747 aaKnown RBP23.37■■□□□ 1.33
TVP23C-205ENST00000518321 ABCA9Q8IUA7 1624 aa23.36■■□□□ 1.33
TVP23C-205ENST00000518321 FHOD3Q2V2M9 1422 aa23.34■■□□□ 1.33
TVP23C-205ENST00000518321 ARAP3Q8WWN8 1544 aa23.33■■□□□ 1.33
TVP23C-205ENST00000518321 KIF21BO75037 1637 aa23.33■■□□□ 1.33
TVP23C-205ENST00000518321 NUP153P49790 1475 aaKnown RBP23.32■■□□□ 1.32
TVP23C-205ENST00000518321 PHLDB1Q86UU1 1377 aa23.32■■□□□ 1.32
TVP23C-205ENST00000518321 EFCAB5A4FU69 1503 aa23.29■■□□□ 1.32
TVP23C-205ENST00000518321 NEO1Q92859 1461 aa23.25■■□□□ 1.31
TVP23C-205ENST00000518321 PLEKHD1A6NEE1 506 aa23.24■■□□□ 1.31
TVP23C-205ENST00000518321 RAPGEF3O95398 923 aa23.19■■□□□ 1.3
TVP23C-205ENST00000518321 UBTFP17480 764 aaKnown RBP23.18■■□□□ 1.3
TVP23C-205ENST00000518321 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
TVP23C-205ENST00000518321 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.3
TVP23C-205ENST00000518321 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.29
TVP23C-205ENST00000518321 FRMPD1Q5SYB0 1578 aa23.11■■□□□ 1.29
TVP23C-205ENST00000518321 CFAP74Q9C0B2 1584 aa23.1■■□□□ 1.29
TVP23C-205ENST00000518321 FANCAO15360 1455 aa23.1■■□□□ 1.29
TVP23C-205ENST00000518321 FMN1Q68DA7 1419 aa23.09■■□□□ 1.29
TVP23C-205ENST00000518321 AKNAQ7Z591 1439 aa23.09■■□□□ 1.29
TVP23C-205ENST00000518321 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
TVP23C-205ENST00000518321 DENND4BO75064 1496 aaPredicted RBP23.09■■□□□ 1.29
TVP23C-205ENST00000518321 TTC37Q6PGP7 1564 aa23.07■■□□□ 1.28
TVP23C-205ENST00000518321 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
TVP23C-205ENST00000518321 ATP1B4Q9UN42 357 aaPredicted RBP23.06■■□□□ 1.28
TVP23C-205ENST00000518321 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
TVP23C-205ENST00000518321 ADAMTSL3P82987 1691 aa23.05■■□□□ 1.28
TVP23C-205ENST00000518321 ARID4BQ4LE39 1312 aaPredicted RBP23.05■■□□□ 1.28
TVP23C-205ENST00000518321 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
TVP23C-205ENST00000518321 ARHGEF40Q8TER5 1519 aa23.02■■□□□ 1.28
TVP23C-205ENST00000518321 PTPRMP28827 1452 aa23.01■■□□□ 1.27
TVP23C-205ENST00000518321 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
TVP23C-205ENST00000518321 BCORL1Q5H9F3 1711 aa23■■□□□ 1.27
TVP23C-205ENST00000518321 PLCH2O75038 1416 aa22.99■■□□□ 1.27
TVP23C-205ENST00000518321 ZMYM4Q5VZL5 1548 aa22.98■■□□□ 1.27
TVP23C-205ENST00000518321 MADDQ8WXG6 1647 aa22.94■■□□□ 1.26
TVP23C-205ENST00000518321 MAGI2Q86UL8 1455 aa22.94■■□□□ 1.26
TVP23C-205ENST00000518321 SCAPERQ9BY12 1400 aa22.94■■□□□ 1.26
TVP23C-205ENST00000518321 ZFYVE16Q7Z3T8 1539 aa22.93■■□□□ 1.26
TVP23C-205ENST00000518321 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms