RNA–Protein interactions for RNA: ENST00000517957.1

PDGFRB-204, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 4

Gene PDGFRB, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-204ENST00000517957 ERCC6L2Q5T890 1561 aa21.39■■□□□ 1.01
PDGFRB-204ENST00000517957 PRG4Q92954 1404 aaPredicted RBP21.38■■□□□ 1.01
PDGFRB-204ENST00000517957 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
PDGFRB-204ENST00000517957 KIAA0586Q9BVV6 1533 aa21.33■■□□□ 1
PDGFRB-204ENST00000517957 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
PDGFRB-204ENST00000517957 NPM1P06748 294 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDGFRB-204ENST00000517957 CARMIL2Q6F5E8 1435 aa21.16■□□□□ 0.98
PDGFRB-204ENST00000517957 IQGAP2Q13576 1575 aa21.14■□□□□ 0.97
PDGFRB-204ENST00000517957 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
PDGFRB-204ENST00000517957 PTPRGP23470 1445 aa21.12■□□□□ 0.97
PDGFRB-204ENST00000517957 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
PDGFRB-204ENST00000517957 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
PDGFRB-204ENST00000517957 PRXQ9BXM0 1461 aa21.05■□□□□ 0.96
PDGFRB-204ENST00000517957 ADCY10Q96PN6 1610 aa21.02■□□□□ 0.96
PDGFRB-204ENST00000517957 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.96
PDGFRB-204ENST00000517957 DISP1Q96F81 1524 aa21■□□□□ 0.95
PDGFRB-204ENST00000517957 EEA1Q15075 1411 aa20.98■□□□□ 0.95
PDGFRB-204ENST00000517957 FAM69CQ0P6D2 419 aa20.98■□□□□ 0.95
PDGFRB-204ENST00000517957 CTTNBP2Q8WZ74 1663 aa20.98■□□□□ 0.95
PDGFRB-204ENST00000517957 FAM9AQ8IZU1 332 aaPredicted RBP20.96■□□□□ 0.95
PDGFRB-204ENST00000517957 MAPKBP1O60336 1514 aa20.95■□□□□ 0.94
PDGFRB-204ENST00000517957 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
PDGFRB-204ENST00000517957 GOLGA3Q08378 1498 aa20.94■□□□□ 0.94
PDGFRB-204ENST00000517957 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
PDGFRB-204ENST00000517957 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
PDGFRB-204ENST00000517957 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
PDGFRB-204ENST00000517957 KIF13AQ9H1H9 1805 aa20.92■□□□□ 0.94
PDGFRB-204ENST00000517957 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
PDGFRB-204ENST00000517957 UHRF1BP1LA0JNW5 1464 aa20.89■□□□□ 0.94
PDGFRB-204ENST00000517957 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
PDGFRB-204ENST00000517957 DIP2BQ9P265 1576 aa20.83■□□□□ 0.92
PDGFRB-204ENST00000517957 PLB1Q6P1J6 1458 aa20.82■□□□□ 0.92
PDGFRB-204ENST00000517957 ASXL2Q76L83 1435 aa20.81■□□□□ 0.92
PDGFRB-204ENST00000517957 KDM5BQ9UGL1 1544 aa20.79■□□□□ 0.92
PDGFRB-204ENST00000517957 RANGAP1P46060 587 aaPredicted RBP20.78■□□□□ 0.92
PDGFRB-204ENST00000517957 TSPOAP1O95153 1857 aa20.74■□□□□ 0.91
PDGFRB-204ENST00000517957 ZCCHC11Q5TAX3 1644 aaKnown RBP20.74■□□□□ 0.91
PDGFRB-204ENST00000517957 KIF21BO75037 1637 aa20.73■□□□□ 0.91
PDGFRB-204ENST00000517957 UBTFP17480 764 aaKnown RBP20.72■□□□□ 0.91
PDGFRB-204ENST00000517957 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
PDGFRB-204ENST00000517957 ABCA8O94911 1581 aa20.72■□□□□ 0.91
PDGFRB-204ENST00000517957 GLI2P10070 1586 aa20.69■□□□□ 0.9
PDGFRB-204ENST00000517957 SAMD9Q5K651 1589 aa20.68■□□□□ 0.9
PDGFRB-204ENST00000517957 EPRSP07814 1512 aaKnown RBP20.68■□□□□ 0.9
PDGFRB-204ENST00000517957 ARID3CA6NKF2 412 aa20.66■□□□□ 0.9
PDGFRB-204ENST00000517957 KCNH8Q96L42 1107 aa20.66■□□□□ 0.9
PDGFRB-204ENST00000517957 WDR7Q9Y4E6 1490 aa20.65■□□□□ 0.9
PDGFRB-204ENST00000517957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.62■□□□□ 0.89
PDGFRB-204ENST00000517957 HNRNPUL2Q1KMD3 747 aaKnown RBP20.62■□□□□ 0.89
PDGFRB-204ENST00000517957 KDM6BO15054 1643 aa20.61■□□□□ 0.89
PDGFRB-204ENST00000517957 FHOD3Q2V2M9 1422 aa20.61■□□□□ 0.89
PDGFRB-204ENST00000517957 ATP10BO94823 1461 aa20.59■□□□□ 0.89
PDGFRB-204ENST00000517957 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
PDGFRB-204ENST00000517957 EFCAB5A4FU69 1503 aa20.58■□□□□ 0.89
PDGFRB-204ENST00000517957 RAPGEF6Q8TEU7 1601 aa20.57■□□□□ 0.88
PDGFRB-204ENST00000517957 MAP3K4Q9Y6R4 1608 aa20.56■□□□□ 0.88
PDGFRB-204ENST00000517957 TEX14Q8IWB6 1497 aa20.56■□□□□ 0.88
PDGFRB-204ENST00000517957 PPRC1Q5VV67 1664 aaKnown RBP20.54■□□□□ 0.88
PDGFRB-204ENST00000517957 CD109Q6YHK3 1445 aa20.53■□□□□ 0.88
PDGFRB-204ENST00000517957 CFAP43Q8NDM7 1665 aa20.49■□□□□ 0.87
PDGFRB-204ENST00000517957 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
PDGFRB-204ENST00000517957 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
PDGFRB-204ENST00000517957 ATP1B4Q9UN42 357 aaPredicted RBP20.48■□□□□ 0.87
PDGFRB-204ENST00000517957 MAGI3Q5TCQ9 1506 aa20.46■□□□□ 0.87
PDGFRB-204ENST00000517957 FMN1Q68DA7 1419 aa20.44■□□□□ 0.86
PDGFRB-204ENST00000517957 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
PDGFRB-204ENST00000517957 COL17A1Q9UMD9 1497 aaPredicted RBP20.43■□□□□ 0.86
PDGFRB-204ENST00000517957 ABCA9Q8IUA7 1624 aa20.38■□□□□ 0.85
PDGFRB-204ENST00000517957 CDK11AQ9UQ88 783 aaPredicted RBP20.36■□□□□ 0.85
PDGFRB-204ENST00000517957 PHLDB1Q86UU1 1377 aa20.35■□□□□ 0.85
PDGFRB-204ENST00000517957 CDK13Q14004 1512 aaKnown RBP20.32■□□□□ 0.84
PDGFRB-204ENST00000517957 HECW1Q76N89 1606 aa20.32■□□□□ 0.84
PDGFRB-204ENST00000517957 KDM4FA0A1W2PPD8 638 aa20.3■□□□□ 0.84
PDGFRB-204ENST00000517957 ARAP3Q8WWN8 1544 aa20.3■□□□□ 0.84
PDGFRB-204ENST00000517957 NEO1Q92859 1461 aa20.28■□□□□ 0.84
PDGFRB-204ENST00000517957 CLIP1P30622 1438 aa20.27■□□□□ 0.83
PDGFRB-204ENST00000517957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDGFRB-204ENST00000517957 RAPGEF3O95398 923 aa20.24■□□□□ 0.83
PDGFRB-204ENST00000517957 CASKIN1Q8WXD9 1431 aa20.23■□□□□ 0.83
PDGFRB-204ENST00000517957 FANCAO15360 1455 aa20.21■□□□□ 0.83
PDGFRB-204ENST00000517957 AKNAQ7Z591 1439 aa20.2■□□□□ 0.82
PDGFRB-204ENST00000517957 TTC37Q6PGP7 1564 aa20.19■□□□□ 0.82
PDGFRB-204ENST00000517957 TROQ12816 1431 aaPredicted RBP20.19■□□□□ 0.82
PDGFRB-204ENST00000517957 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
PDGFRB-204ENST00000517957 PLCH2O75038 1416 aa20.18■□□□□ 0.82
PDGFRB-204ENST00000517957 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
PDGFRB-204ENST00000517957 CFAP74Q9C0B2 1584 aa20.17■□□□□ 0.82
PDGFRB-204ENST00000517957 EFCAB2Q5VUJ9 269 aa20.17■□□□□ 0.82
PDGFRB-204ENST00000517957 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
PDGFRB-204ENST00000517957 PCF11O94913 1555 aaKnown RBP20.17■□□□□ 0.82
PDGFRB-204ENST00000517957 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
PDGFRB-204ENST00000517957 LRRIQ1Q96JM4 1722 aa20.15■□□□□ 0.82
PDGFRB-204ENST00000517957 KIF14Q15058 1648 aa20.14■□□□□ 0.81
PDGFRB-204ENST00000517957 MYO5CQ9NQX4 1742 aa20.11■□□□□ 0.81
PDGFRB-204ENST00000517957 LOC105371045A0A1W2PR82 267 aa20.11■□□□□ 0.81
PDGFRB-204ENST00000517957 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
PDGFRB-204ENST00000517957 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
PDGFRB-204ENST00000517957 ARID4BQ4LE39 1312 aaPredicted RBP20.08■□□□□ 0.81
PDGFRB-204ENST00000517957 FRMPD1Q5SYB0 1578 aa20.08■□□□□ 0.8
PDGFRB-204ENST00000517957 ARHGAP5Q13017 1502 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms