RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 ERCC6L2Q5T890 1561 aa35.67■■■■□ 3.3
MTCL1-204ENST00000517554 RAPGEF2Q9Y4G8 1499 aa35.61■■■■□ 3.29
MTCL1-204ENST00000517554 KIAA0586Q9BVV6 1533 aa35.61■■■■□ 3.29
MTCL1-204ENST00000517554 JPH4Q96JJ6 628 aa35.6■■■■□ 3.29
MTCL1-204ENST00000517554 PRG4Q92954 1404 aaPredicted RBP35.53■■■■□ 3.28
MTCL1-204ENST00000517554 PRXQ9BXM0 1461 aa35.53■■■■□ 3.28
MTCL1-204ENST00000517554 CSRNP3Q8WYN3 585 aa35.47■■■■□ 3.27
MTCL1-204ENST00000517554 EEA1Q15075 1411 aa35.43■■■■□ 3.26
MTCL1-204ENST00000517554 FAM9AQ8IZU1 332 aaPredicted RBP35.39■■■■□ 3.26
MTCL1-204ENST00000517554 IQGAP2Q13576 1575 aa35.38■■■■□ 3.25
MTCL1-204ENST00000517554 CTTNBP2Q8WZ74 1663 aa35.22■■■■□ 3.23
MTCL1-204ENST00000517554 DISP1Q96F81 1524 aa35.21■■■■□ 3.23
MTCL1-204ENST00000517554 UGGT2Q9NYU1 1516 aa35.21■■■■□ 3.23
MTCL1-204ENST00000517554 CARMIL2Q6F5E8 1435 aa35.16■■■■□ 3.22
MTCL1-204ENST00000517554 KIF21BO75037 1637 aa35.11■■■■□ 3.21
MTCL1-204ENST00000517554 TNIKQ9UKE5 1360 aa35.1■■■■□ 3.21
MTCL1-204ENST00000517554 PTPRGP23470 1445 aa35.09■■■■□ 3.21
MTCL1-204ENST00000517554 KIAA0556O60303 1618 aa35.07■■■■□ 3.2
MTCL1-204ENST00000517554 TTBK1Q5TCY1 1321 aaPredicted RBP35.04■■■■□ 3.2
MTCL1-204ENST00000517554 ADCY10Q96PN6 1610 aa35■■■■□ 3.19
MTCL1-204ENST00000517554 EHMT2Q96KQ7 1210 aa34.96■■■■□ 3.19
MTCL1-204ENST00000517554 GOLGA3Q08378 1498 aa34.95■■■■□ 3.18
MTCL1-204ENST00000517554 TRHP20396 242 aaPredicted RBP34.91■■■■□ 3.18
MTCL1-204ENST00000517554 UACAQ9BZF9 1416 aa34.85■■■■□ 3.17
MTCL1-204ENST00000517554 SAMD9Q5K651 1589 aa34.84■■■■□ 3.17
MTCL1-204ENST00000517554 P3H3Q8IVL6 736 aa34.83■■■■□ 3.17
MTCL1-204ENST00000517554 UHRF1BP1LA0JNW5 1464 aa34.82■■■■□ 3.16
MTCL1-204ENST00000517554 UBTFP17480 764 aaKnown RBP34.81■■■■□ 3.16
MTCL1-204ENST00000517554 RANGAP1P46060 587 aaPredicted RBP34.81■■■■□ 3.16
MTCL1-204ENST00000517554 NPM1P06748 294 aaKnown RBP eCLIP34.79■■■■□ 3.16
MTCL1-204ENST00000517554 ABCC2Q92887 1545 aa34.79■■■■□ 3.16
MTCL1-204ENST00000517554 PLB1Q6P1J6 1458 aa34.77■■■■□ 3.16
MTCL1-204ENST00000517554 MAPKBP1O60336 1514 aa34.75■■■■□ 3.15
MTCL1-204ENST00000517554 ABCA8O94911 1581 aa34.71■■■■□ 3.15
MTCL1-204ENST00000517554 KDM5BQ9UGL1 1544 aa34.68■■■■□ 3.14
MTCL1-204ENST00000517554 FHOD3Q2V2M9 1422 aa34.66■■■■□ 3.14
MTCL1-204ENST00000517554 EFCAB5A4FU69 1503 aa34.63■■■■□ 3.13
MTCL1-204ENST00000517554 ABCC10Q5T3U5 1492 aa34.61■■■■□ 3.13
MTCL1-204ENST00000517554 KIF13AQ9H1H9 1805 aa34.6■■■■□ 3.13
MTCL1-204ENST00000517554 ZCCHC11Q5TAX3 1644 aaKnown RBP34.58■■■■□ 3.13
MTCL1-204ENST00000517554 ASXL2Q76L83 1435 aa34.57■■■■□ 3.12
MTCL1-204ENST00000517554 DIP2BQ9P265 1576 aa34.56■■■■□ 3.12
MTCL1-204ENST00000517554 ARHGAP35Q9NRY4 1499 aa34.55■■■■□ 3.12
MTCL1-204ENST00000517554 FAM69CQ0P6D2 419 aa34.53■■■■□ 3.12
MTCL1-204ENST00000517554 RAPGEF6Q8TEU7 1601 aa34.48■■■■□ 3.11
MTCL1-204ENST00000517554 ARID3CA6NKF2 412 aa34.45■■■■□ 3.1
MTCL1-204ENST00000517554 ATP10BO94823 1461 aa34.44■■■■□ 3.1
MTCL1-204ENST00000517554 NUP153P49790 1475 aaKnown RBP34.41■■■■□ 3.1
MTCL1-204ENST00000517554 EPRSP07814 1512 aaKnown RBP34.38■■■■□ 3.09
MTCL1-204ENST00000517554 WDR7Q9Y4E6 1490 aa34.37■■■■□ 3.09
MTCL1-204ENST00000517554 GLI2P10070 1586 aa34.35■■■■□ 3.09
MTCL1-204ENST00000517554 LOC105371045A0A1W2PR82 267 aa34.31■■■■□ 3.08
MTCL1-204ENST00000517554 FMN1Q68DA7 1419 aa34.3■■■■□ 3.08
MTCL1-204ENST00000517554 CLIP1P30622 1438 aa34.29■■■■□ 3.08
MTCL1-204ENST00000517554 KCNH8Q96L42 1107 aa34.23■■■■□ 3.07
MTCL1-204ENST00000517554 TSPOAP1O95153 1857 aa34.21■■■■□ 3.07
MTCL1-204ENST00000517554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.2■■■■□ 3.07
MTCL1-204ENST00000517554 HNRNPUL2Q1KMD3 747 aaKnown RBP34.2■■■■□ 3.07
MTCL1-204ENST00000517554 MAP3K4Q9Y6R4 1608 aa34.19■■■■□ 3.06
MTCL1-204ENST00000517554 PPRC1Q5VV67 1664 aaKnown RBP34.18■■■■□ 3.06
MTCL1-204ENST00000517554 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
MTCL1-204ENST00000517554 CEP162Q5TB80 1403 aa34.15■■■■□ 3.06
MTCL1-204ENST00000517554 HECW1Q76N89 1606 aa34.14■■■■□ 3.06
MTCL1-204ENST00000517554 ATP1B4Q9UN42 357 aaPredicted RBP34.14■■■■□ 3.06
MTCL1-204ENST00000517554 PCF11O94913 1555 aaKnown RBP34.09■■■■□ 3.05
MTCL1-204ENST00000517554 CASKIN1Q8WXD9 1431 aa34.09■■■■□ 3.05
MTCL1-204ENST00000517554 PLEKHD1A6NEE1 506 aa34.06■■■■□ 3.04
MTCL1-204ENST00000517554 CD109Q6YHK3 1445 aa34.06■■■■□ 3.04
MTCL1-204ENST00000517554 LRRIQ1Q96JM4 1722 aa34.06■■■■□ 3.04
MTCL1-204ENST00000517554 CFAP43Q8NDM7 1665 aa34.05■■■■□ 3.04
MTCL1-204ENST00000517554 ABCA9Q8IUA7 1624 aa34.01■■■■□ 3.04
MTCL1-204ENST00000517554 MAGI3Q5TCQ9 1506 aa34■■■■□ 3.03
MTCL1-204ENST00000517554 FYCO1Q9BQS8 1478 aa33.97■■■■□ 3.03
MTCL1-204ENST00000517554 TEX14Q8IWB6 1497 aa33.96■■■■□ 3.03
MTCL1-204ENST00000517554 KDM6BO15054 1643 aa33.96■■■■□ 3.03
MTCL1-204ENST00000517554 COL17A1Q9UMD9 1497 aaPredicted RBP33.95■■■■□ 3.02
MTCL1-204ENST00000517554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.91■■■■□ 3.02
MTCL1-204ENST00000517554 CCDC18Q5T9S5 1454 aa33.89■■■■□ 3.02
MTCL1-204ENST00000517554 CDK11AQ9UQ88 783 aaPredicted RBP33.88■■■■□ 3.01
MTCL1-204ENST00000517554 TTC37Q6PGP7 1564 aa33.86■■■■□ 3.01
MTCL1-204ENST00000517554 TROQ12816 1431 aaPredicted RBP33.85■■■■□ 3.01
MTCL1-204ENST00000517554 KIF14Q15058 1648 aa33.81■■■■□ 3
MTCL1-204ENST00000517554 VPS8Q8N3P4 1428 aa33.73■■■□□ 2.99
MTCL1-204ENST00000517554 NEO1Q92859 1461 aa33.72■■■□□ 2.99
MTCL1-204ENST00000517554 ARAP3Q8WWN8 1544 aa33.71■■■□□ 2.99
MTCL1-204ENST00000517554 PLCH2O75038 1416 aa33.69■■■□□ 2.98
MTCL1-204ENST00000517554 PHLDB1Q86UU1 1377 aa33.67■■■□□ 2.98
MTCL1-204ENST00000517554 FANCAO15360 1455 aa33.67■■■□□ 2.98
MTCL1-204ENST00000517554 AKNAQ7Z591 1439 aa33.62■■■□□ 2.97
MTCL1-204ENST00000517554 MYO5CQ9NQX4 1742 aa33.6■■■□□ 2.97
MTCL1-204ENST00000517554 RAPGEF3O95398 923 aa33.59■■■□□ 2.97
MTCL1-204ENST00000517554 MTUS2Q5JR59 1369 aa33.56■■■□□ 2.96
MTCL1-204ENST00000517554 CFAP74Q9C0B2 1584 aa33.55■■■□□ 2.96
MTCL1-204ENST00000517554 FRMPD1Q5SYB0 1578 aa33.54■■■□□ 2.96
MTCL1-204ENST00000517554 TIAM1Q13009 1591 aa33.53■■■□□ 2.96
MTCL1-204ENST00000517554 EFCAB2Q5VUJ9 269 aa33.52■■■□□ 2.96
MTCL1-204ENST00000517554 CDC42BPBQ9Y5S2 1711 aa33.51■■■□□ 2.96
MTCL1-204ENST00000517554 ARHGAP5Q13017 1502 aa33.5■■■□□ 2.95
MTCL1-204ENST00000517554 EHBP1L1Q8N3D4 1523 aa33.5■■■□□ 2.95
MTCL1-204ENST00000517554 DENND4BO75064 1496 aaPredicted RBP33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms