RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
CTNNA1-203ENST00000517534 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
CTNNA1-203ENST00000517534 IGF1RP08069 1367 aa14.75□□□□□ -0.05
CTNNA1-203ENST00000517534 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
CTNNA1-203ENST00000517534 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
CTNNA1-203ENST00000517534 KIAA0586Q9BVV6 1533 aa14.67□□□□□ -0.06
CTNNA1-203ENST00000517534 NPM1P06748 294 aaKnown RBP eCLIP14.64□□□□□ -0.07
CTNNA1-203ENST00000517534 FAM69CQ0P6D2 419 aa14.64□□□□□ -0.07
CTNNA1-203ENST00000517534 ABCC10Q5T3U5 1492 aa14.63□□□□□ -0.07
CTNNA1-203ENST00000517534 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
CTNNA1-203ENST00000517534 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
CTNNA1-203ENST00000517534 MAPKBP1O60336 1514 aa14.58□□□□□ -0.08
CTNNA1-203ENST00000517534 ADCY10Q96PN6 1610 aa14.58□□□□□ -0.08
CTNNA1-203ENST00000517534 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
CTNNA1-203ENST00000517534 CUL7Q14999 1698 aa14.57□□□□□ -0.08
CTNNA1-203ENST00000517534 PTPRGP23470 1445 aa14.57□□□□□ -0.08
CTNNA1-203ENST00000517534 TNIKQ9UKE5 1360 aa14.53□□□□□ -0.08
CTNNA1-203ENST00000517534 DIP2BQ9P265 1576 aa14.52□□□□□ -0.08
CTNNA1-203ENST00000517534 TTBK1Q5TCY1 1321 aaPredicted RBP14.51□□□□□ -0.09
CTNNA1-203ENST00000517534 CARMIL2Q6F5E8 1435 aa14.5□□□□□ -0.09
CTNNA1-203ENST00000517534 ABCC2Q92887 1545 aa14.46□□□□□ -0.09
CTNNA1-203ENST00000517534 DISP1Q96F81 1524 aa14.46□□□□□ -0.09
CTNNA1-203ENST00000517534 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
CTNNA1-203ENST00000517534 UHRF1BP1LA0JNW5 1464 aa14.44□□□□□ -0.1
CTNNA1-203ENST00000517534 RAPGEF2Q9Y4G8 1499 aa14.44□□□□□ -0.1
CTNNA1-203ENST00000517534 ASXL2Q76L83 1435 aa14.44□□□□□ -0.1
CTNNA1-203ENST00000517534 UACAQ9BZF9 1416 aa14.44□□□□□ -0.1
CTNNA1-203ENST00000517534 KDM4FA0A1W2PPD8 638 aa14.43□□□□□ -0.1
CTNNA1-203ENST00000517534 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
CTNNA1-203ENST00000517534 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
CTNNA1-203ENST00000517534 UGGT2Q9NYU1 1516 aa14.41□□□□□ -0.1
CTNNA1-203ENST00000517534 KDM6BO15054 1643 aa14.38□□□□□ -0.11
CTNNA1-203ENST00000517534 KDM5BQ9UGL1 1544 aa14.38□□□□□ -0.11
CTNNA1-203ENST00000517534 GLI2P10070 1586 aa14.38□□□□□ -0.11
CTNNA1-203ENST00000517534 EPRSP07814 1512 aaKnown RBP14.35□□□□□ -0.11
CTNNA1-203ENST00000517534 TSPOAP1O95153 1857 aa14.34□□□□□ -0.11
CTNNA1-203ENST00000517534 COL17A1Q9UMD9 1497 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-203ENST00000517534 KIAA0556O60303 1618 aa14.33□□□□□ -0.12
CTNNA1-203ENST00000517534 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
CTNNA1-203ENST00000517534 PPRC1Q5VV67 1664 aaKnown RBP14.31□□□□□ -0.12
CTNNA1-203ENST00000517534 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-203ENST00000517534 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
CTNNA1-203ENST00000517534 WDR7Q9Y4E6 1490 aa14.26□□□□□ -0.13
CTNNA1-203ENST00000517534 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
CTNNA1-203ENST00000517534 ABCA8O94911 1581 aa14.24□□□□□ -0.13
CTNNA1-203ENST00000517534 TEX14Q8IWB6 1497 aa14.24□□□□□ -0.13
CTNNA1-203ENST00000517534 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
CTNNA1-203ENST00000517534 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
CTNNA1-203ENST00000517534 CD109Q6YHK3 1445 aa14.21□□□□□ -0.13
CTNNA1-203ENST00000517534 ADGRL1O94910 1474 aa14.2□□□□□ -0.14
CTNNA1-203ENST00000517534 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
CTNNA1-203ENST00000517534 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
CTNNA1-203ENST00000517534 CTTNBP2Q8WZ74 1663 aa14.18□□□□□ -0.14
CTNNA1-203ENST00000517534 ATP10BO94823 1461 aa14.17□□□□□ -0.14
CTNNA1-203ENST00000517534 ARID3CA6NKF2 412 aa14.16□□□□□ -0.14
CTNNA1-203ENST00000517534 FAM9AQ8IZU1 332 aaPredicted RBP14.13□□□□□ -0.15
CTNNA1-203ENST00000517534 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
CTNNA1-203ENST00000517534 ARAP3Q8WWN8 1544 aa14.08□□□□□ -0.16
CTNNA1-203ENST00000517534 SAMD9Q5K651 1589 aa14.08□□□□□ -0.16
CTNNA1-203ENST00000517534 PHLDB1Q86UU1 1377 aa14.07□□□□□ -0.16
CTNNA1-203ENST00000517534 EEA1Q15075 1411 aa14.07□□□□□ -0.16
CTNNA1-203ENST00000517534 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
CTNNA1-203ENST00000517534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
CTNNA1-203ENST00000517534 RAPGEF3O95398 923 aa14.04□□□□□ -0.16
CTNNA1-203ENST00000517534 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
CTNNA1-203ENST00000517534 FHOD3Q2V2M9 1422 aa14.04□□□□□ -0.16
CTNNA1-203ENST00000517534 NUP153P49790 1475 aaKnown RBP14.04□□□□□ -0.16
CTNNA1-203ENST00000517534 ILDR1Q86SU0 546 aaPredicted RBP14.03□□□□□ -0.16
CTNNA1-203ENST00000517534 ABCA9Q8IUA7 1624 aa14.02□□□□□ -0.16
CTNNA1-203ENST00000517534 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
CTNNA1-203ENST00000517534 NEO1Q92859 1461 aa14.01□□□□□ -0.17
CTNNA1-203ENST00000517534 PLEKHD1A6NEE1 506 aa14□□□□□ -0.17
CTNNA1-203ENST00000517534 HECW2Q9P2P5 1572 aa14□□□□□ -0.17
CTNNA1-203ENST00000517534 FOXD1Q16676 465 aa13.98□□□□□ -0.17
CTNNA1-203ENST00000517534 KIF21BO75037 1637 aa13.96□□□□□ -0.17
CTNNA1-203ENST00000517534 PTPRMP28827 1452 aa13.93□□□□□ -0.18
CTNNA1-203ENST00000517534 FRMPD1Q5SYB0 1578 aa13.92□□□□□ -0.18
CTNNA1-203ENST00000517534 AKNAQ7Z591 1439 aa13.92□□□□□ -0.18
CTNNA1-203ENST00000517534 EFCAB5A4FU69 1503 aa13.92□□□□□ -0.18
CTNNA1-203ENST00000517534 DENND4BO75064 1496 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-203ENST00000517534 ARID4BQ4LE39 1312 aaPredicted RBP13.9□□□□□ -0.18
CTNNA1-203ENST00000517534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.9□□□□□ -0.18
CTNNA1-203ENST00000517534 ADAMTSL3P82987 1691 aa13.9□□□□□ -0.18
CTNNA1-203ENST00000517534 FANCAO15360 1455 aa13.89□□□□□ -0.19
CTNNA1-203ENST00000517534 UBTFP17480 764 aaKnown RBP13.89□□□□□ -0.19
CTNNA1-203ENST00000517534 EHMT2Q96KQ7 1210 aa13.89□□□□□ -0.19
CTNNA1-203ENST00000517534 CDK13Q14004 1512 aaKnown RBP13.87□□□□□ -0.19
CTNNA1-203ENST00000517534 PLCH2O75038 1416 aa13.86□□□□□ -0.19
CTNNA1-203ENST00000517534 ARHGAP35Q9NRY4 1499 aa13.85□□□□□ -0.19
CTNNA1-203ENST00000517534 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
CTNNA1-203ENST00000517534 YEATS2Q9ULM3 1422 aa13.84□□□□□ -0.19
CTNNA1-203ENST00000517534 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
CTNNA1-203ENST00000517534 FMN1Q68DA7 1419 aa13.83□□□□□ -0.2
CTNNA1-203ENST00000517534 SCAPERQ9BY12 1400 aa13.83□□□□□ -0.2
CTNNA1-203ENST00000517534 BCORL1Q5H9F3 1711 aa13.83□□□□□ -0.2
CTNNA1-203ENST00000517534 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
CTNNA1-203ENST00000517534 RICTORQ6R327 1708 aa13.82□□□□□ -0.2
CTNNA1-203ENST00000517534 MADDQ8WXG6 1647 aa13.82□□□□□ -0.2
CTNNA1-203ENST00000517534 MAGI2Q86UL8 1455 aa13.81□□□□□ -0.2
CTNNA1-203ENST00000517534 ZMYM4Q5VZL5 1548 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms