RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 EMP3P54852 163 aa1.72□□□□□ -2.13
RNU6-1238P-201ENST00000517215 KRTAP17-1Q9BYP8 105 aa1.72□□□□□ -2.13
RNU6-1238P-201ENST00000517215 FARP1Q9Y4F1 1045 aaPredicted RBP1.72□□□□□ -2.13
RNU6-1238P-201ENST00000517215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP1.71□□□□□ -2.14
RNU6-1238P-201ENST00000517215 HNRNPUL2Q1KMD3 747 aaKnown RBP1.71□□□□□ -2.14
RNU6-1238P-201ENST00000517215 Q6ZNB5 142 aa1.71□□□□□ -2.14
RNU6-1238P-201ENST00000517215 KRTAP9-2Q9BYQ4 174 aa1.71□□□□□ -2.14
RNU6-1238P-201ENST00000517215 FAM205CA6NFA0 338 aa1.7□□□□□ -2.14
RNU6-1238P-201ENST00000517215 SNPHO15079 494 aa1.69□□□□□ -2.14
RNU6-1238P-201ENST00000517215 ZBTB12Q9Y330 459 aaPredicted RBP1.69□□□□□ -2.14
RNU6-1238P-201ENST00000517215 RGS20O76081 388 aa1.68□□□□□ -2.14
RNU6-1238P-201ENST00000517215 ZNF775Q96BV0 537 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1238P-201ENST00000517215 ATF5Q9Y2D1 282 aaPredicted RBP1.68□□□□□ -2.14
RNU6-1238P-201ENST00000517215 KRTAP4-8A0A0G2JLE6 195 aa1.66□□□□□ -2.14
RNU6-1238P-201ENST00000517215 PRR29P0C7W0 189 aa1.66□□□□□ -2.14
RNU6-1238P-201ENST00000517215 SAMD1Q6SPF0 538 aaPredicted RBP1.66□□□□□ -2.14
RNU6-1238P-201ENST00000517215 ATN1P54259 1190 aaPredicted RBP1.65□□□□□ -2.15
RNU6-1238P-201ENST00000517215 PHF12Q96QT6 1004 aa1.65□□□□□ -2.15
RNU6-1238P-201ENST00000517215 LCE2BO14633 110 aa1.64□□□□□ -2.15
RNU6-1238P-201ENST00000517215 PTGER2P43116 358 aa1.64□□□□□ -2.15
RNU6-1238P-201ENST00000517215 XP32Q5T750 250 aa1.64□□□□□ -2.15
RNU6-1238P-201ENST00000517215 LCE3BQ5TA77 95 aa1.63□□□□□ -2.15
RNU6-1238P-201ENST00000517215 TRAF7Q6Q0C0 670 aa1.63□□□□□ -2.15
RNU6-1238P-201ENST00000517215 PSMG3-AS1Q96PY0 264 aa1.63□□□□□ -2.15
RNU6-1238P-201ENST00000517215 KRTAP9-9Q9BYP9 154 aa1.63□□□□□ -2.15
RNU6-1238P-201ENST00000517215 KRTAP9-4Q9BYQ2 154 aa1.63□□□□□ -2.15
RNU6-1238P-201ENST00000517215 COLQQ9Y215 455 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1238P-201ENST00000517215 SEC24BO95487 1268 aa1.62□□□□□ -2.15
RNU6-1238P-201ENST00000517215 ZNF787Q6DD87 383 aa1.62□□□□□ -2.15
RNU6-1238P-201ENST00000517215 KRTAP9-8Q9BYQ0 159 aa1.62□□□□□ -2.15
RNU6-1238P-201ENST00000517215 KRTAP4-7Q9BYR0 210 aa1.62□□□□□ -2.15
RNU6-1238P-201ENST00000517215 STK17AQ9UEE5 414 aa1.62□□□□□ -2.15
RNU6-1238P-201ENST00000517215 BTBD11A6QL63 1104 aa1.61□□□□□ -2.15
RNU6-1238P-201ENST00000517215 KRTAP5-3Q6L8H2 238 aa1.61□□□□□ -2.15
RNU6-1238P-201ENST00000517215 MS4A3Q96HJ5 214 aa1.61□□□□□ -2.15
RNU6-1238P-201ENST00000517215 SPDYE2BA6NHP3 402 aa1.6□□□□□ -2.15
RNU6-1238P-201ENST00000517215 SPDYE6P0CI01 402 aa1.6□□□□□ -2.15
RNU6-1238P-201ENST00000517215 SPDYE2Q495Y8 402 aa1.6□□□□□ -2.15
RNU6-1238P-201ENST00000517215 HCSTQ9UBK5 93 aa1.6□□□□□ -2.15
RNU6-1238P-201ENST00000517215 SLC4A2P04920 1241 aa1.58□□□□□ -2.16
RNU6-1238P-201ENST00000517215 PAK3O75914 559 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1238P-201ENST00000517215 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
RNU6-1238P-201ENST00000517215 ANO8Q9HCE9 1232 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1238P-201ENST00000517215 LAPTM4AQ15012 233 aa1.55□□□□□ -2.16
RNU6-1238P-201ENST00000517215 LCE2AQ5TA79 106 aaPredicted RBP1.55□□□□□ -2.16
RNU6-1238P-201ENST00000517215 BMP2KQ9NSY1 1161 aaPredicted RBP1.55□□□□□ -2.16
RNU6-1238P-201ENST00000517215 TREML4Q6UXN2 200 aa1.54□□□□□ -2.16
RNU6-1238P-201ENST00000517215 ANKRD13DQ6ZTN6 518 aa1.54□□□□□ -2.16
RNU6-1238P-201ENST00000517215 KRTAP4-12Q9BQ66 201 aa1.54□□□□□ -2.16
RNU6-1238P-201ENST00000517215 ERBB3P21860 1342 aa1.54□□□□□ -2.16
RNU6-1238P-201ENST00000517215 A0A0G2JS52 829 aa1.53□□□□□ -2.16
RNU6-1238P-201ENST00000517215 EIF2AK3Q9NZJ5 1116 aaKnown RBP1.53□□□□□ -2.16
RNU6-1238P-201ENST00000517215 LCE1DQ5T752 114 aa1.52□□□□□ -2.17
RNU6-1238P-201ENST00000517215 IER5LQ5T953 404 aa1.52□□□□□ -2.17
RNU6-1238P-201ENST00000517215 IFFO2Q5TF58 517 aa1.52□□□□□ -2.17
RNU6-1238P-201ENST00000517215 GFRA3O60609 400 aa1.51□□□□□ -2.17
RNU6-1238P-201ENST00000517215 INSM1Q01101 510 aaPredicted RBP1.51□□□□□ -2.17
RNU6-1238P-201ENST00000517215 NCBP3Q53F19 620 aaKnown RBP1.51□□□□□ -2.17
RNU6-1238P-201ENST00000517215 ZNF687Q8N1G0 1237 aa1.51□□□□□ -2.17
RNU6-1238P-201ENST00000517215 KRTAP4-9Q9BYQ8 210 aa1.51□□□□□ -2.17
RNU6-1238P-201ENST00000517215 VARS2Q5ST30 1063 aaKnown RBP1.5□□□□□ -2.17
RNU6-1238P-201ENST00000517215 TRPC6Q9Y210 931 aa1.5□□□□□ -2.17
RNU6-1238P-201ENST00000517215 SSUH2Q9Y2M2 353 aa1.5□□□□□ -2.17
RNU6-1238P-201ENST00000517215 HOXB1P14653 301 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1238P-201ENST00000517215 TIE1P35590 1138 aa1.49□□□□□ -2.17
RNU6-1238P-201ENST00000517215 ZNF692Q9BU19 519 aaPredicted RBP1.49□□□□□ -2.17
RNU6-1238P-201ENST00000517215 TTLL13PA6NNM8 815 aa1.47□□□□□ -2.17
RNU6-1238P-201ENST00000517215 WIPF1O43516 503 aa1.47□□□□□ -2.17
RNU6-1238P-201ENST00000517215 NPM3O75607 178 aaKnown RBP1.47□□□□□ -2.17
RNU6-1238P-201ENST00000517215 PLCG2P16885 1265 aa1.47□□□□□ -2.17
RNU6-1238P-201ENST00000517215 TRIM35Q9UPQ4 493 aa1.46□□□□□ -2.18
RNU6-1238P-201ENST00000517215 FAM181BA6NEQ2 426 aa1.45□□□□□ -2.18
RNU6-1238P-201ENST00000517215 LORP23490 312 aaPredicted RBP1.45□□□□□ -2.18
RNU6-1238P-201ENST00000517215 LSM11P83369 360 aaKnown RBP eCLIP1.45□□□□□ -2.18
RNU6-1238P-201ENST00000517215 KCTD17Q8N5Z5 321 aa1.45□□□□□ -2.18
RNU6-1238P-201ENST00000517215 CREBZFQ9NS37 354 aa1.45□□□□□ -2.18
RNU6-1238P-201ENST00000517215 NRG2O14511 850 aaPredicted RBP1.44□□□□□ -2.18
RNU6-1238P-201ENST00000517215 WFS1O76024 890 aa1.44□□□□□ -2.18
RNU6-1238P-201ENST00000517215 PABPN1Q86U42 306 aaKnown RBP eCLIP1.44□□□□□ -2.18
RNU6-1238P-201ENST00000517215 ZNF710Q8N1W2 664 aa1.44□□□□□ -2.18
RNU6-1238P-201ENST00000517215 KRTAP4-5Q9BYR2 181 aa1.44□□□□□ -2.18
RNU6-1238P-201ENST00000517215 POTECB2RU33 542 aa1.43□□□□□ -2.18
RNU6-1238P-201ENST00000517215 HOXB3P14651 431 aaPredicted RBP1.43□□□□□ -2.18
RNU6-1238P-201ENST00000517215 IRX5P78411 483 aaPredicted RBP1.43□□□□□ -2.18
RNU6-1238P-201ENST00000517215 KIF12Q96FN5 646 aa1.42□□□□□ -2.18
RNU6-1238P-201ENST00000517215 KRTAP4-11Q9BYQ6 195 aa1.42□□□□□ -2.18
RNU6-1238P-201ENST00000517215 C3orf67Q6ZVT6 689 aa1.41□□□□□ -2.18
RNU6-1238P-201ENST00000517215 KRTAP19-1Q8IUB9 90 aa1.41□□□□□ -2.18
RNU6-1238P-201ENST00000517215 MYCNP04198 464 aaPredicted RBP1.4□□□□□ -2.19
RNU6-1238P-201ENST00000517215 NPM1P06748 294 aaKnown RBP eCLIP1.4□□□□□ -2.19
RNU6-1238P-201ENST00000517215 LAMC2Q13753 1193 aa1.4□□□□□ -2.19
RNU6-1238P-201ENST00000517215 OCEL1Q9H607 264 aa1.4□□□□□ -2.19
RNU6-1238P-201ENST00000517215 NFX1Q12986 1120 aaKnown RBP1.39□□□□□ -2.19
RNU6-1238P-201ENST00000517215 KCTD12Q96CX2 325 aaKnown RBP1.39□□□□□ -2.19
RNU6-1238P-201ENST00000517215 MAP3K13O43283 966 aa1.38□□□□□ -2.19
RNU6-1238P-201ENST00000517215 PTPN5P54829 565 aa1.38□□□□□ -2.19
RNU6-1238P-201ENST00000517215 FBLN2P98095 1184 aa1.38□□□□□ -2.19
RNU6-1238P-201ENST00000517215 ARID1BQ8NFD5 2236 aaPredicted RBP1.38□□□□□ -2.19
RNU6-1238P-201ENST00000517215 DOK7Q18PE1 504 aa1.37□□□□□ -2.19
RNU6-1238P-201ENST00000517215 CCDC61Q9Y6R9 512 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms