RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
SCARNA21-201ENST00000517026 CSRNP3Q8WYN3 585 aa24.37■■□□□ 1.49
SCARNA21-201ENST00000517026 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.49
SCARNA21-201ENST00000517026 EEA1Q15075 1411 aa24.3■■□□□ 1.48
SCARNA21-201ENST00000517026 PRXQ9BXM0 1461 aa24.29■■□□□ 1.48
SCARNA21-201ENST00000517026 JPH4Q96JJ6 628 aa24.28■■□□□ 1.48
SCARNA21-201ENST00000517026 KIAA0586Q9BVV6 1533 aa24.25■■□□□ 1.47
SCARNA21-201ENST00000517026 ERCC6L2Q5T890 1561 aa24.19■■□□□ 1.46
SCARNA21-201ENST00000517026 PRG4Q92954 1404 aaPredicted RBP24.18■■□□□ 1.46
SCARNA21-201ENST00000517026 SHROOM2Q13796 1616 aa24.17■■□□□ 1.46
SCARNA21-201ENST00000517026 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
SCARNA21-201ENST00000517026 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
SCARNA21-201ENST00000517026 IQGAP2Q13576 1575 aa24.08■■□□□ 1.45
SCARNA21-201ENST00000517026 KIF21BO75037 1637 aa24■■□□□ 1.43
SCARNA21-201ENST00000517026 TTBK1Q5TCY1 1321 aaPredicted RBP23.99■■□□□ 1.43
SCARNA21-201ENST00000517026 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
SCARNA21-201ENST00000517026 UGGT2Q9NYU1 1516 aa23.98■■□□□ 1.43
SCARNA21-201ENST00000517026 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
SCARNA21-201ENST00000517026 DISP1Q96F81 1524 aa23.97■■□□□ 1.43
SCARNA21-201ENST00000517026 RANGAP1P46060 587 aaPredicted RBP23.95■■□□□ 1.42
SCARNA21-201ENST00000517026 CTTNBP2Q8WZ74 1663 aa23.94■■□□□ 1.42
SCARNA21-201ENST00000517026 GOLGA3Q08378 1498 aa23.94■■□□□ 1.42
SCARNA21-201ENST00000517026 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
SCARNA21-201ENST00000517026 PTPRGP23470 1445 aa23.93■■□□□ 1.42
SCARNA21-201ENST00000517026 KIF13AQ9H1H9 1805 aa23.91■■□□□ 1.42
SCARNA21-201ENST00000517026 P3H3Q8IVL6 736 aa23.89■■□□□ 1.41
SCARNA21-201ENST00000517026 KIAA0556O60303 1618 aa23.85■■□□□ 1.41
SCARNA21-201ENST00000517026 UACAQ9BZF9 1416 aa23.75■■□□□ 1.39
SCARNA21-201ENST00000517026 LOC105371045A0A1W2PR82 267 aa23.73■■□□□ 1.39
SCARNA21-201ENST00000517026 ABCC10Q5T3U5 1492 aa23.73■■□□□ 1.39
SCARNA21-201ENST00000517026 SAMD9Q5K651 1589 aa23.73■■□□□ 1.39
SCARNA21-201ENST00000517026 ADCY10Q96PN6 1610 aa23.73■■□□□ 1.39
SCARNA21-201ENST00000517026 NPM1P06748 294 aaKnown RBP eCLIP23.72■■□□□ 1.39
SCARNA21-201ENST00000517026 FHOD3Q2V2M9 1422 aa23.72■■□□□ 1.39
SCARNA21-201ENST00000517026 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
SCARNA21-201ENST00000517026 PLB1Q6P1J6 1458 aa23.69■■□□□ 1.38
SCARNA21-201ENST00000517026 UHRF1BP1LA0JNW5 1464 aa23.67■■□□□ 1.38
SCARNA21-201ENST00000517026 FAM69CQ0P6D2 419 aa23.65■■□□□ 1.38
SCARNA21-201ENST00000517026 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
SCARNA21-201ENST00000517026 EFCAB5A4FU69 1503 aa23.64■■□□□ 1.38
SCARNA21-201ENST00000517026 ABCC2Q92887 1545 aa23.64■■□□□ 1.38
SCARNA21-201ENST00000517026 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.38
SCARNA21-201ENST00000517026 ABCA8O94911 1581 aa23.61■■□□□ 1.37
SCARNA21-201ENST00000517026 ARID3CA6NKF2 412 aa23.6■■□□□ 1.37
SCARNA21-201ENST00000517026 KDM5BQ9UGL1 1544 aa23.56■■□□□ 1.36
SCARNA21-201ENST00000517026 CLIP1P30622 1438 aa23.56■■□□□ 1.36
SCARNA21-201ENST00000517026 KDM4FA0A1W2PPD8 638 aa23.54■■□□□ 1.36
SCARNA21-201ENST00000517026 ASXL2Q76L83 1435 aa23.51■■□□□ 1.35
SCARNA21-201ENST00000517026 KDM6BO15054 1643 aa23.48■■□□□ 1.35
SCARNA21-201ENST00000517026 CEP162Q5TB80 1403 aa23.48■■□□□ 1.35
SCARNA21-201ENST00000517026 ATP10BO94823 1461 aa23.48■■□□□ 1.35
SCARNA21-201ENST00000517026 RAPGEF6Q8TEU7 1601 aa23.48■■□□□ 1.35
SCARNA21-201ENST00000517026 ATP1B4Q9UN42 357 aaPredicted RBP23.47■■□□□ 1.35
SCARNA21-201ENST00000517026 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
SCARNA21-201ENST00000517026 NUP153P49790 1475 aaKnown RBP23.47■■□□□ 1.35
SCARNA21-201ENST00000517026 ZCCHC11Q5TAX3 1644 aaKnown RBP23.47■■□□□ 1.35
SCARNA21-201ENST00000517026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
SCARNA21-201ENST00000517026 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
SCARNA21-201ENST00000517026 TSPOAP1O95153 1857 aa23.43■■□□□ 1.34
SCARNA21-201ENST00000517026 KCNH8Q96L42 1107 aa23.4■■□□□ 1.34
SCARNA21-201ENST00000517026 WDR7Q9Y4E6 1490 aa23.38■■□□□ 1.33
SCARNA21-201ENST00000517026 PPRC1Q5VV67 1664 aaKnown RBP23.35■■□□□ 1.33
SCARNA21-201ENST00000517026 EPRSP07814 1512 aaKnown RBP23.35■■□□□ 1.33
SCARNA21-201ENST00000517026 GLI2P10070 1586 aa23.33■■□□□ 1.33
SCARNA21-201ENST00000517026 CDK13Q14004 1512 aaKnown RBP23.33■■□□□ 1.32
SCARNA21-201ENST00000517026 CASKIN1Q8WXD9 1431 aa23.33■■□□□ 1.32
SCARNA21-201ENST00000517026 PLEKHD1A6NEE1 506 aa23.32■■□□□ 1.32
SCARNA21-201ENST00000517026 HECW1Q76N89 1606 aa23.29■■□□□ 1.32
SCARNA21-201ENST00000517026 PCF11O94913 1555 aaKnown RBP23.28■■□□□ 1.32
SCARNA21-201ENST00000517026 FYCO1Q9BQS8 1478 aa23.24■■□□□ 1.31
SCARNA21-201ENST00000517026 COL17A1Q9UMD9 1497 aaPredicted RBP23.24■■□□□ 1.31
SCARNA21-201ENST00000517026 CDK11AQ9UQ88 783 aaPredicted RBP23.21■■□□□ 1.31
SCARNA21-201ENST00000517026 CD109Q6YHK3 1445 aa23.19■■□□□ 1.3
SCARNA21-201ENST00000517026 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
SCARNA21-201ENST00000517026 MAP3K4Q9Y6R4 1608 aa23.18■■□□□ 1.3
SCARNA21-201ENST00000517026 ADGRL1O94910 1474 aa23.17■■□□□ 1.3
SCARNA21-201ENST00000517026 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
SCARNA21-201ENST00000517026 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
SCARNA21-201ENST00000517026 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
SCARNA21-201ENST00000517026 TROQ12816 1431 aaPredicted RBP23.14■■□□□ 1.29
SCARNA21-201ENST00000517026 MAGI3Q5TCQ9 1506 aa23.09■■□□□ 1.29
SCARNA21-201ENST00000517026 ABCA9Q8IUA7 1624 aa23.08■■□□□ 1.29
SCARNA21-201ENST00000517026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.28
SCARNA21-201ENST00000517026 CFAP43Q8NDM7 1665 aa23.06■■□□□ 1.28
SCARNA21-201ENST00000517026 TEX14Q8IWB6 1497 aa23.06■■□□□ 1.28
SCARNA21-201ENST00000517026 TTC37Q6PGP7 1564 aa23.03■■□□□ 1.28
SCARNA21-201ENST00000517026 KIF14Q15058 1648 aa23.03■■□□□ 1.28
SCARNA21-201ENST00000517026 MTUS2Q5JR59 1369 aa23.02■■□□□ 1.28
SCARNA21-201ENST00000517026 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
SCARNA21-201ENST00000517026 PLCH2O75038 1416 aa22.98■■□□□ 1.27
SCARNA21-201ENST00000517026 KANK4Q5T7N3 995 aaPredicted RBP22.96■■□□□ 1.27
SCARNA21-201ENST00000517026 TIAM1Q13009 1591 aa22.94■■□□□ 1.26
SCARNA21-201ENST00000517026 APLP2Q06481 763 aa22.93■■□□□ 1.26
SCARNA21-201ENST00000517026 EFCAB2Q5VUJ9 269 aa22.93■■□□□ 1.26
SCARNA21-201ENST00000517026 FANCAO15360 1455 aa22.92■■□□□ 1.26
SCARNA21-201ENST00000517026 NEO1Q92859 1461 aa22.92■■□□□ 1.26
SCARNA21-201ENST00000517026 PHLDB1Q86UU1 1377 aa22.91■■□□□ 1.26
SCARNA21-201ENST00000517026 AKNAQ7Z591 1439 aa22.91■■□□□ 1.26
SCARNA21-201ENST00000517026 EHBP1L1Q8N3D4 1523 aa22.9■■□□□ 1.26
SCARNA21-201ENST00000517026 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms