RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 KIAA0586Q9BVV6 1533 aa32.63■■■□□ 2.81
LMNA-225ENST00000515824 PRG4Q92954 1404 aaPredicted RBP32.6■■■□□ 2.81
LMNA-225ENST00000515824 RAPGEF2Q9Y4G8 1499 aa32.59■■■□□ 2.81
LMNA-225ENST00000515824 ERCC6L2Q5T890 1561 aa32.58■■■□□ 2.81
LMNA-225ENST00000515824 CHIC1Q5VXU3 224 aa32.51■■■□□ 2.79
LMNA-225ENST00000515824 CSRNP3Q8WYN3 585 aa32.46■■■□□ 2.79
LMNA-225ENST00000515824 PRXQ9BXM0 1461 aa32.42■■■□□ 2.78
LMNA-225ENST00000515824 EEA1Q15075 1411 aa32.41■■■□□ 2.78
LMNA-225ENST00000515824 IQGAP2Q13576 1575 aa32.36■■■□□ 2.77
LMNA-225ENST00000515824 CARMIL2Q6F5E8 1435 aa32.33■■■□□ 2.77
LMNA-225ENST00000515824 FAM9AQ8IZU1 332 aaPredicted RBP32.32■■■□□ 2.76
LMNA-225ENST00000515824 TRHP20396 242 aaPredicted RBP32.29■■■□□ 2.76
LMNA-225ENST00000515824 PTPRGP23470 1445 aa32.22■■■□□ 2.75
LMNA-225ENST00000515824 UGGT2Q9NYU1 1516 aa32.21■■■□□ 2.75
LMNA-225ENST00000515824 TNIKQ9UKE5 1360 aa32.21■■■□□ 2.75
LMNA-225ENST00000515824 TTBK1Q5TCY1 1321 aaPredicted RBP32.19■■■□□ 2.74
LMNA-225ENST00000515824 CTTNBP2Q8WZ74 1663 aa32.17■■■□□ 2.74
LMNA-225ENST00000515824 DISP1Q96F81 1524 aa32.16■■■□□ 2.74
LMNA-225ENST00000515824 NPM1P06748 294 aaKnown RBP eCLIP32.16■■■□□ 2.74
LMNA-225ENST00000515824 GOLGA3Q08378 1498 aa32.07■■■□□ 2.72
LMNA-225ENST00000515824 KIAA0556O60303 1618 aa32.05■■■□□ 2.72
LMNA-225ENST00000515824 ADCY10Q96PN6 1610 aa32.02■■■□□ 2.72
LMNA-225ENST00000515824 KIF21BO75037 1637 aa32■■■□□ 2.71
LMNA-225ENST00000515824 UACAQ9BZF9 1416 aa31.98■■■□□ 2.71
LMNA-225ENST00000515824 UHRF1BP1LA0JNW5 1464 aa31.92■■■□□ 2.7
LMNA-225ENST00000515824 UBTFP17480 764 aaKnown RBP31.91■■■□□ 2.7
LMNA-225ENST00000515824 EHMT2Q96KQ7 1210 aa31.91■■■□□ 2.7
LMNA-225ENST00000515824 P3H3Q8IVL6 736 aa31.9■■■□□ 2.7
LMNA-225ENST00000515824 ABCC2Q92887 1545 aa31.9■■■□□ 2.7
LMNA-225ENST00000515824 MAPKBP1O60336 1514 aa31.89■■■□□ 2.7
LMNA-225ENST00000515824 RANGAP1P46060 587 aaPredicted RBP31.88■■■□□ 2.69
LMNA-225ENST00000515824 FAM69CQ0P6D2 419 aa31.81■■■□□ 2.68
LMNA-225ENST00000515824 PLB1Q6P1J6 1458 aa31.8■■■□□ 2.68
LMNA-225ENST00000515824 ABCC10Q5T3U5 1492 aa31.79■■■□□ 2.68
LMNA-225ENST00000515824 SAMD9Q5K651 1589 aa31.78■■■□□ 2.68
LMNA-225ENST00000515824 KDM5BQ9UGL1 1544 aa31.76■■■□□ 2.68
LMNA-225ENST00000515824 ABCA8O94911 1581 aa31.73■■■□□ 2.67
LMNA-225ENST00000515824 ASXL2Q76L83 1435 aa31.72■■■□□ 2.67
LMNA-225ENST00000515824 KIF13AQ9H1H9 1805 aa31.69■■■□□ 2.66
LMNA-225ENST00000515824 DIP2BQ9P265 1576 aa31.67■■■□□ 2.66
LMNA-225ENST00000515824 EFCAB5A4FU69 1503 aa31.66■■■□□ 2.66
LMNA-225ENST00000515824 FHOD3Q2V2M9 1422 aa31.66■■■□□ 2.66
LMNA-225ENST00000515824 ZCCHC11Q5TAX3 1644 aaKnown RBP31.64■■■□□ 2.66
LMNA-225ENST00000515824 ARID3CA6NKF2 412 aa31.56■■■□□ 2.64
LMNA-225ENST00000515824 RAPGEF6Q8TEU7 1601 aa31.53■■■□□ 2.64
LMNA-225ENST00000515824 ATP10BO94823 1461 aa31.52■■■□□ 2.64
LMNA-225ENST00000515824 WDR7Q9Y4E6 1490 aa31.52■■■□□ 2.64
LMNA-225ENST00000515824 EPRSP07814 1512 aaKnown RBP31.51■■■□□ 2.63
LMNA-225ENST00000515824 GLI2P10070 1586 aa31.51■■■□□ 2.63
LMNA-225ENST00000515824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.5■■■□□ 2.63
LMNA-225ENST00000515824 HNRNPUL2Q1KMD3 747 aaKnown RBP31.5■■■□□ 2.63
LMNA-225ENST00000515824 ARHGAP35Q9NRY4 1499 aa31.5■■■□□ 2.63
LMNA-225ENST00000515824 KCNH8Q96L42 1107 aa31.48■■■□□ 2.63
LMNA-225ENST00000515824 NUP153P49790 1475 aaKnown RBP31.44■■■□□ 2.62
LMNA-225ENST00000515824 FMN1Q68DA7 1419 aa31.43■■■□□ 2.62
LMNA-225ENST00000515824 TSPOAP1O95153 1857 aa31.4■■■□□ 2.62
LMNA-225ENST00000515824 ATP1B4Q9UN42 357 aaPredicted RBP31.37■■■□□ 2.61
LMNA-225ENST00000515824 PLEKHD1A6NEE1 506 aa31.33■■■□□ 2.61
LMNA-225ENST00000515824 MAP3K4Q9Y6R4 1608 aa31.32■■■□□ 2.6
LMNA-225ENST00000515824 CLIP1P30622 1438 aa31.31■■■□□ 2.6
LMNA-225ENST00000515824 CD109Q6YHK3 1445 aa31.3■■■□□ 2.6
LMNA-225ENST00000515824 TEX14Q8IWB6 1497 aa31.27■■■□□ 2.6
LMNA-225ENST00000515824 PPRC1Q5VV67 1664 aaKnown RBP31.24■■■□□ 2.59
LMNA-225ENST00000515824 KDM6BO15054 1643 aa31.23■■■□□ 2.59
LMNA-225ENST00000515824 HECW1Q76N89 1606 aa31.22■■■□□ 2.59
LMNA-225ENST00000515824 CFAP43Q8NDM7 1665 aa31.22■■■□□ 2.59
LMNA-225ENST00000515824 LOC105371045A0A1W2PR82 267 aa31.21■■■□□ 2.59
LMNA-225ENST00000515824 MAGI3Q5TCQ9 1506 aa31.2■■■□□ 2.59
LMNA-225ENST00000515824 CDK11AQ9UQ88 783 aaPredicted RBP31.2■■■□□ 2.59
LMNA-225ENST00000515824 CDK13Q14004 1512 aaKnown RBP31.19■■■□□ 2.58
LMNA-225ENST00000515824 CASKIN1Q8WXD9 1431 aa31.15■■■□□ 2.58
LMNA-225ENST00000515824 ABCA9Q8IUA7 1624 aa31.13■■■□□ 2.57
LMNA-225ENST00000515824 CEP162Q5TB80 1403 aa31.11■■■□□ 2.57
LMNA-225ENST00000515824 COL17A1Q9UMD9 1497 aaPredicted RBP31.07■■■□□ 2.56
LMNA-225ENST00000515824 PCF11O94913 1555 aaKnown RBP31.05■■■□□ 2.56
LMNA-225ENST00000515824 CCDC18Q5T9S5 1454 aa31.04■■■□□ 2.56
LMNA-225ENST00000515824 FYCO1Q9BQS8 1478 aa31.04■■■□□ 2.56
LMNA-225ENST00000515824 PHLDB1Q86UU1 1377 aa31.03■■■□□ 2.56
LMNA-225ENST00000515824 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31■■■□□ 2.55
LMNA-225ENST00000515824 TROQ12816 1431 aaPredicted RBP30.98■■■□□ 2.55
LMNA-225ENST00000515824 LRRIQ1Q96JM4 1722 aa30.95■■■□□ 2.55
LMNA-225ENST00000515824 NEO1Q92859 1461 aa30.95■■■□□ 2.55
LMNA-225ENST00000515824 ARAP3Q8WWN8 1544 aa30.93■■■□□ 2.54
LMNA-225ENST00000515824 TTC37Q6PGP7 1564 aa30.91■■■□□ 2.54
LMNA-225ENST00000515824 PLCH2O75038 1416 aa30.89■■■□□ 2.53
LMNA-225ENST00000515824 KIF14Q15058 1648 aa30.88■■■□□ 2.53
LMNA-225ENST00000515824 FANCAO15360 1455 aa30.87■■■□□ 2.53
LMNA-225ENST00000515824 AKNAQ7Z591 1439 aa30.85■■■□□ 2.53
LMNA-225ENST00000515824 RAPGEF3O95398 923 aa30.83■■■□□ 2.53
LMNA-225ENST00000515824 EFCAB2Q5VUJ9 269 aa30.83■■■□□ 2.53
LMNA-225ENST00000515824 CFAP74Q9C0B2 1584 aa30.8■■■□□ 2.52
LMNA-225ENST00000515824 AEBP2Q6ZN18 517 aaPredicted RBP30.77■■■□□ 2.52
LMNA-225ENST00000515824 DENND4BO75064 1496 aaPredicted RBP30.76■■■□□ 2.52
LMNA-225ENST00000515824 MTUS2Q5JR59 1369 aa30.76■■■□□ 2.51
LMNA-225ENST00000515824 VPS8Q8N3P4 1428 aa30.75■■■□□ 2.51
LMNA-225ENST00000515824 MYO5CQ9NQX4 1742 aa30.75■■■□□ 2.51
LMNA-225ENST00000515824 ARHGAP5Q13017 1502 aa30.7■■■□□ 2.51
LMNA-225ENST00000515824 ADGRL1O94910 1474 aa30.7■■■□□ 2.5
LMNA-225ENST00000515824 SCAPERQ9BY12 1400 aa30.69■■■□□ 2.5
LMNA-225ENST00000515824 KDM4FA0A1W2PPD8 638 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 269.2 ms