RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 SPRYD3Q8NCJ5 442 aa14.58□□□□□ -0.08
SFXN1-211ENST00000515736 DSG3P32926 999 aa14.57□□□□□ -0.08
SFXN1-211ENST00000515736 TPRNQ4KMQ1 711 aa14.53□□□□□ -0.08
SFXN1-211ENST00000515736 TSHZ2Q9NRE2 1034 aa14.51□□□□□ -0.09
SFXN1-211ENST00000515736 CIZ1Q9ULV3 898 aaPredicted RBP14.48□□□□□ -0.09
SFXN1-211ENST00000515736 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
SFXN1-211ENST00000515736 ZBTB47Q9UFB7 747 aaPredicted RBP14.45□□□□□ -0.1
SFXN1-211ENST00000515736 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
SFXN1-211ENST00000515736 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
SFXN1-211ENST00000515736 DNAJC5Q9H3Z4 198 aa14.35□□□□□ -0.11
SFXN1-211ENST00000515736 HS6ST3Q8IZP7 471 aa14.34□□□□□ -0.11
SFXN1-211ENST00000515736 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
SFXN1-211ENST00000515736 GSE1Q14687 1217 aa14.23□□□□□ -0.13
SFXN1-211ENST00000515736 NBR1Q14596 966 aa14.22□□□□□ -0.13
SFXN1-211ENST00000515736 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
SFXN1-211ENST00000515736 ERCC6Q03468 1493 aa14.21□□□□□ -0.13
SFXN1-211ENST00000515736 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
SFXN1-211ENST00000515736 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
SFXN1-211ENST00000515736 NUBP1P53384 320 aa14.17□□□□□ -0.14
SFXN1-211ENST00000515736 CUX2O14529 1486 aa14.17□□□□□ -0.14
SFXN1-211ENST00000515736 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
SFXN1-211ENST00000515736 NKX1-1Q15270 411 aaPredicted RBP14.15□□□□□ -0.14
SFXN1-211ENST00000515736 HMGXB3Q12766 1538 aa14.14□□□□□ -0.15
SFXN1-211ENST00000515736 RIOK3O14730 519 aaKnown RBP14.12□□□□□ -0.15
SFXN1-211ENST00000515736 GTPBP6O43824 516 aaPredicted RBP14.1□□□□□ -0.15
SFXN1-211ENST00000515736 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
SFXN1-211ENST00000515736 BAZ1AQ9NRL2 1556 aaPredicted RBP14.09□□□□□ -0.15
SFXN1-211ENST00000515736 BAZ1BQ9UIG0 1483 aaKnown RBP14.08□□□□□ -0.16
SFXN1-211ENST00000515736 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
SFXN1-211ENST00000515736 NESP48681 1621 aa14.07□□□□□ -0.16
SFXN1-211ENST00000515736 STK25O00506 426 aa14.01□□□□□ -0.17
SFXN1-211ENST00000515736 VGFO15240 615 aaPredicted RBP14.01□□□□□ -0.17
SFXN1-211ENST00000515736 PEG3Q9GZU2 1588 aa14□□□□□ -0.17
SFXN1-211ENST00000515736 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
SFXN1-211ENST00000515736 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
SFXN1-211ENST00000515736 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
SFXN1-211ENST00000515736 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
SFXN1-211ENST00000515736 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.17
SFXN1-211ENST00000515736 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
SFXN1-211ENST00000515736 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
SFXN1-211ENST00000515736 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.18
SFXN1-211ENST00000515736 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
SFXN1-211ENST00000515736 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
SFXN1-211ENST00000515736 SUPT5HO00267 1087 aaKnown RBP13.94□□□□□ -0.18
SFXN1-211ENST00000515736 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.88□□□□□ -0.19
SFXN1-211ENST00000515736 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
SFXN1-211ENST00000515736 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
SFXN1-211ENST00000515736 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
SFXN1-211ENST00000515736 RYDENQ9NUL5 291 aaKnown RBP13.88□□□□□ -0.19
SFXN1-211ENST00000515736 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
SFXN1-211ENST00000515736 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
SFXN1-211ENST00000515736 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
SFXN1-211ENST00000515736 PDS5BQ9NTI5 1447 aa13.87□□□□□ -0.19
SFXN1-211ENST00000515736 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
SFXN1-211ENST00000515736 WIZO95785 1651 aa13.84□□□□□ -0.19
SFXN1-211ENST00000515736 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
SFXN1-211ENST00000515736 RBM42Q9BTD8 480 aaKnown RBP13.8□□□□□ -0.2
SFXN1-211ENST00000515736 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
SFXN1-211ENST00000515736 PYGBP11216 843 aa13.78□□□□□ -0.2
SFXN1-211ENST00000515736 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.21
SFXN1-211ENST00000515736 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
SFXN1-211ENST00000515736 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
SFXN1-211ENST00000515736 P3H3Q8IVL6 736 aa13.75□□□□□ -0.21
SFXN1-211ENST00000515736 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
SFXN1-211ENST00000515736 REM2Q8IYK8 340 aaPredicted RBP13.74□□□□□ -0.21
SFXN1-211ENST00000515736 TULP1O00294 542 aaPredicted RBP13.73□□□□□ -0.21
SFXN1-211ENST00000515736 WDR62O43379 1518 aa13.73□□□□□ -0.21
SFXN1-211ENST00000515736 CEP164Q9UPV0 1460 aa13.71□□□□□ -0.21
SFXN1-211ENST00000515736 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
SFXN1-211ENST00000515736 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
SFXN1-211ENST00000515736 CADPS2Q86UW7 1296 aa13.65□□□□□ -0.22
SFXN1-211ENST00000515736 KCNV2Q8TDN2 545 aa13.63□□□□□ -0.23
SFXN1-211ENST00000515736 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
SFXN1-211ENST00000515736 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
SFXN1-211ENST00000515736 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
SFXN1-211ENST00000515736 CFTRP13569 1480 aa13.61□□□□□ -0.23
SFXN1-211ENST00000515736 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
SFXN1-211ENST00000515736 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
SFXN1-211ENST00000515736 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
SFXN1-211ENST00000515736 LMOD2Q6P5Q4 547 aa13.58□□□□□ -0.24
SFXN1-211ENST00000515736 PITPNM1O00562 1244 aa13.57□□□□□ -0.24
SFXN1-211ENST00000515736 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
SFXN1-211ENST00000515736 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
SFXN1-211ENST00000515736 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
SFXN1-211ENST00000515736 MFRPQ9BY79 579 aa13.51□□□□□ -0.25
SFXN1-211ENST00000515736 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
SFXN1-211ENST00000515736 PCDHB13Q9Y5F0 798 aa13.49□□□□□ -0.25
SFXN1-211ENST00000515736 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
SFXN1-211ENST00000515736 PSEN1P49768 467 aa13.45□□□□□ -0.26
SFXN1-211ENST00000515736 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
SFXN1-211ENST00000515736 ARHGEF1Q92888 912 aaKnown RBP13.44□□□□□ -0.26
SFXN1-211ENST00000515736 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
SFXN1-211ENST00000515736 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
SFXN1-211ENST00000515736 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
SFXN1-211ENST00000515736 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
SFXN1-211ENST00000515736 ZNF608Q9ULD9 1512 aaPredicted RBP13.4□□□□□ -0.26
SFXN1-211ENST00000515736 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
SFXN1-211ENST00000515736 PPP1R37O75864 691 aa13.39□□□□□ -0.27
SFXN1-211ENST00000515736 RIMBP3CA6NJZ7 1639 aa13.39□□□□□ -0.27
SFXN1-211ENST00000515736 RIMBP3BA6NNM3 1639 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms