RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 CEP170Q5SW79 1584 aa19.33■□□□□ 0.69
SUB1-213ENST00000515355 FAM9AQ8IZU1 332 aaPredicted RBP19.31■□□□□ 0.68
SUB1-213ENST00000515355 CUL7Q14999 1698 aa19.29■□□□□ 0.68
SUB1-213ENST00000515355 JPH4Q96JJ6 628 aa19.28■□□□□ 0.68
SUB1-213ENST00000515355 ARAP1Q96P48 1450 aa19.26■□□□□ 0.67
SUB1-213ENST00000515355 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
SUB1-213ENST00000515355 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
SUB1-213ENST00000515355 PRG4Q92954 1404 aaPredicted RBP19.21■□□□□ 0.67
SUB1-213ENST00000515355 TTBK1Q5TCY1 1321 aaPredicted RBP19.21■□□□□ 0.67
SUB1-213ENST00000515355 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
SUB1-213ENST00000515355 PLPPR3Q6T4P5 718 aa19.18■□□□□ 0.66
SUB1-213ENST00000515355 KIAA0586Q9BVV6 1533 aa19.18■□□□□ 0.66
SUB1-213ENST00000515355 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
SUB1-213ENST00000515355 MSH5O43196 834 aa19.15■□□□□ 0.66
SUB1-213ENST00000515355 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
SUB1-213ENST00000515355 TRHP20396 242 aaPredicted RBP19.1■□□□□ 0.65
SUB1-213ENST00000515355 EEA1Q15075 1411 aa19.08■□□□□ 0.65
SUB1-213ENST00000515355 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
SUB1-213ENST00000515355 RANGAP1P46060 587 aaPredicted RBP19.06■□□□□ 0.64
SUB1-213ENST00000515355 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
SUB1-213ENST00000515355 CARMIL2Q6F5E8 1435 aa19.04■□□□□ 0.64
SUB1-213ENST00000515355 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
SUB1-213ENST00000515355 PTPRGP23470 1445 aa19■□□□□ 0.63
SUB1-213ENST00000515355 NPM1P06748 294 aaKnown RBP eCLIP18.99■□□□□ 0.63
SUB1-213ENST00000515355 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
SUB1-213ENST00000515355 P3H3Q8IVL6 736 aa18.98■□□□□ 0.63
SUB1-213ENST00000515355 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
SUB1-213ENST00000515355 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
SUB1-213ENST00000515355 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
SUB1-213ENST00000515355 DISP1Q96F81 1524 aa18.93■□□□□ 0.62
SUB1-213ENST00000515355 UGGT2Q9NYU1 1516 aa18.92■□□□□ 0.62
SUB1-213ENST00000515355 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
SUB1-213ENST00000515355 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
SUB1-213ENST00000515355 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
SUB1-213ENST00000515355 KIF21BO75037 1637 aa18.85■□□□□ 0.61
SUB1-213ENST00000515355 ADRA2BP18089 450 aa18.84■□□□□ 0.61
SUB1-213ENST00000515355 UACAQ9BZF9 1416 aa18.82■□□□□ 0.6
SUB1-213ENST00000515355 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
SUB1-213ENST00000515355 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
SUB1-213ENST00000515355 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
SUB1-213ENST00000515355 PLB1Q6P1J6 1458 aa18.76■□□□□ 0.59
SUB1-213ENST00000515355 ABCC2Q92887 1545 aa18.74■□□□□ 0.59
SUB1-213ENST00000515355 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
SUB1-213ENST00000515355 UHRF1BP1LA0JNW5 1464 aa18.72■□□□□ 0.59
SUB1-213ENST00000515355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
SUB1-213ENST00000515355 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
SUB1-213ENST00000515355 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
SUB1-213ENST00000515355 ASXL2Q76L83 1435 aa18.68■□□□□ 0.58
SUB1-213ENST00000515355 SAMD9Q5K651 1589 aa18.68■□□□□ 0.58
SUB1-213ENST00000515355 KCNH8Q96L42 1107 aa18.67■□□□□ 0.58
SUB1-213ENST00000515355 MAPKBP1O60336 1514 aa18.67■□□□□ 0.58
SUB1-213ENST00000515355 ABCC10Q5T3U5 1492 aa18.65■□□□□ 0.58
SUB1-213ENST00000515355 KDM5BQ9UGL1 1544 aa18.64■□□□□ 0.58
SUB1-213ENST00000515355 ABCA8O94911 1581 aa18.64■□□□□ 0.57
SUB1-213ENST00000515355 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
SUB1-213ENST00000515355 EFCAB5A4FU69 1503 aa18.62■□□□□ 0.57
SUB1-213ENST00000515355 ZCCHC11Q5TAX3 1644 aaKnown RBP18.61■□□□□ 0.57
SUB1-213ENST00000515355 ARHGAP35Q9NRY4 1499 aa18.59■□□□□ 0.57
SUB1-213ENST00000515355 DIP2BQ9P265 1576 aa18.58■□□□□ 0.56
SUB1-213ENST00000515355 ATP10BO94823 1461 aa18.57■□□□□ 0.56
SUB1-213ENST00000515355 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
SUB1-213ENST00000515355 KIF13AQ9H1H9 1805 aa18.56■□□□□ 0.56
SUB1-213ENST00000515355 WDR7Q9Y4E6 1490 aa18.55■□□□□ 0.56
SUB1-213ENST00000515355 CLIP1P30622 1438 aa18.54■□□□□ 0.56
SUB1-213ENST00000515355 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
SUB1-213ENST00000515355 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
SUB1-213ENST00000515355 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.56
SUB1-213ENST00000515355 PLEKHD1A6NEE1 506 aa18.51■□□□□ 0.55
SUB1-213ENST00000515355 TSPOAP1O95153 1857 aa18.51■□□□□ 0.55
SUB1-213ENST00000515355 GLI2P10070 1586 aa18.44■□□□□ 0.54
SUB1-213ENST00000515355 CD109Q6YHK3 1445 aa18.44■□□□□ 0.54
SUB1-213ENST00000515355 CDK13Q14004 1512 aaKnown RBP18.44■□□□□ 0.54
SUB1-213ENST00000515355 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
SUB1-213ENST00000515355 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
SUB1-213ENST00000515355 HECW1Q76N89 1606 aa18.39■□□□□ 0.53
SUB1-213ENST00000515355 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
SUB1-213ENST00000515355 CASKIN1Q8WXD9 1431 aa18.36■□□□□ 0.53
SUB1-213ENST00000515355 MAP3K4Q9Y6R4 1608 aa18.36■□□□□ 0.53
SUB1-213ENST00000515355 KDM6BO15054 1643 aa18.34■□□□□ 0.53
SUB1-213ENST00000515355 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
SUB1-213ENST00000515355 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
SUB1-213ENST00000515355 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
SUB1-213ENST00000515355 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
SUB1-213ENST00000515355 FYCO1Q9BQS8 1478 aa18.29■□□□□ 0.52
SUB1-213ENST00000515355 CCDC18Q5T9S5 1454 aa18.28■□□□□ 0.52
SUB1-213ENST00000515355 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.51
SUB1-213ENST00000515355 COL17A1Q9UMD9 1497 aaPredicted RBP18.26■□□□□ 0.51
SUB1-213ENST00000515355 TROQ12816 1431 aaPredicted RBP18.26■□□□□ 0.51
SUB1-213ENST00000515355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.25■□□□□ 0.512e-8■■■■□ 20.6
SUB1-213ENST00000515355 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
SUB1-213ENST00000515355 LRRIQ1Q96JM4 1722 aa18.23■□□□□ 0.51
SUB1-213ENST00000515355 TTC37Q6PGP7 1564 aa18.21■□□□□ 0.51
SUB1-213ENST00000515355 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.51
SUB1-213ENST00000515355 KIF14Q15058 1648 aa18.2■□□□□ 0.5
SUB1-213ENST00000515355 EFCAB2Q5VUJ9 269 aa18.19■□□□□ 0.5
SUB1-213ENST00000515355 FANCAO15360 1455 aa18.19■□□□□ 0.5
SUB1-213ENST00000515355 VPS8Q8N3P4 1428 aa18.18■□□□□ 0.5
SUB1-213ENST00000515355 NEO1Q92859 1461 aa18.18■□□□□ 0.5
SUB1-213ENST00000515355 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
SUB1-213ENST00000515355 PLCH2O75038 1416 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms