RNA–Protein interactions for RNA: ENST00000515031.5

LINC00504-204, long intergenic non-protein coding RNA 504, humanhuman

TSL 3

Gene LINC00504, Length 987 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-204ENST00000515031 TRIM41Q8WV44 630 aa13.06□□□□□ -0.32
LINC00504-204ENST00000515031 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
LINC00504-204ENST00000515031 HAX1O00165 279 aa13.04□□□□□ -0.32
LINC00504-204ENST00000515031 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
LINC00504-204ENST00000515031 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
LINC00504-204ENST00000515031 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
LINC00504-204ENST00000515031 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
LINC00504-204ENST00000515031 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
LINC00504-204ENST00000515031 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
LINC00504-204ENST00000515031 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
LINC00504-204ENST00000515031 EVX2Q03828 476 aa13.01□□□□□ -0.33
LINC00504-204ENST00000515031 WIZO95785 1651 aa12.99□□□□□ -0.33
LINC00504-204ENST00000515031 IFNLR1Q8IU57 520 aaPredicted RBP12.97□□□□□ -0.33
LINC00504-204ENST00000515031 SMARCA4P51532 1647 aa12.96□□□□□ -0.33
LINC00504-204ENST00000515031 EEA1Q15075 1411 aa12.94□□□□□ -0.34
LINC00504-204ENST00000515031 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.34
LINC00504-204ENST00000515031 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
LINC00504-204ENST00000515031 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
LINC00504-204ENST00000515031 WRNQ14191 1432 aaPredicted RBP eCLIP12.88□□□□□ -0.35
LINC00504-204ENST00000515031 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
LINC00504-204ENST00000515031 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
LINC00504-204ENST00000515031 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
LINC00504-204ENST00000515031 NPM1P06748 294 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC00504-204ENST00000515031 KLHL34Q8N239 644 aa12.84□□□□□ -0.35
LINC00504-204ENST00000515031 TSPYL2Q9H2G4 693 aaPredicted RBP12.79□□□□□ -0.36
LINC00504-204ENST00000515031 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
LINC00504-204ENST00000515031 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
LINC00504-204ENST00000515031 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
LINC00504-204ENST00000515031 NUBP1P53384 320 aa12.75□□□□□ -0.37
LINC00504-204ENST00000515031 PPARGC1BQ86YN6 1023 aaKnown RBP12.75□□□□□ -0.37
LINC00504-204ENST00000515031 TNIKQ9UKE5 1360 aa12.74□□□□□ -0.37
LINC00504-204ENST00000515031 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
LINC00504-204ENST00000515031 BICRAQ9NZM4 1560 aa12.69□□□□□ -0.38
LINC00504-204ENST00000515031 SPOCK2Q92563 424 aa12.69□□□□□ -0.38
LINC00504-204ENST00000515031 PHF12Q96QT6 1004 aa12.69□□□□□ -0.38
LINC00504-204ENST00000515031 KIF21BO75037 1637 aa12.68□□□□□ -0.38
LINC00504-204ENST00000515031 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
LINC00504-204ENST00000515031 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
LINC00504-204ENST00000515031 CEP162Q5TB80 1403 aa12.66□□□□□ -0.38
LINC00504-204ENST00000515031 ABCC8Q09428 1581 aa12.64□□□□□ -0.39
LINC00504-204ENST00000515031 GABBR2O75899 941 aa12.64□□□□□ -0.39
LINC00504-204ENST00000515031 PKD2Q13563 968 aa12.64□□□□□ -0.39
LINC00504-204ENST00000515031 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
LINC00504-204ENST00000515031 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
LINC00504-204ENST00000515031 BAZ1BQ9UIG0 1483 aaKnown RBP12.64□□□□□ -0.39
LINC00504-204ENST00000515031 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
LINC00504-204ENST00000515031 ZNF579Q8NAF0 562 aaKnown RBP12.62□□□□□ -0.39
LINC00504-204ENST00000515031 CCDC61Q9Y6R9 512 aa12.61□□□□□ -0.39
LINC00504-204ENST00000515031 PELP1Q8IZL8 1130 aaKnown RBP12.6□□□□□ -0.39
LINC00504-204ENST00000515031 FAM212AQ96EL1 285 aa12.58□□□□□ -0.4
LINC00504-204ENST00000515031 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
LINC00504-204ENST00000515031 ATAD2BQ9ULI0 1458 aa12.55□□□□□ -0.4
LINC00504-204ENST00000515031 GALR2O43603 387 aaPredicted RBP12.55□□□□□ -0.4
LINC00504-204ENST00000515031 SOGA1O94964 1423 aa12.54□□□□□ -0.4
LINC00504-204ENST00000515031 PYGBP11216 843 aa12.53□□□□□ -0.4
LINC00504-204ENST00000515031 MAP3K13O43283 966 aa12.52□□□□□ -0.41
LINC00504-204ENST00000515031 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
LINC00504-204ENST00000515031 HMGXB3Q12766 1538 aa12.52□□□□□ -0.41
LINC00504-204ENST00000515031 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
LINC00504-204ENST00000515031 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
LINC00504-204ENST00000515031 SYNJ1O43426 1573 aa12.5□□□□□ -0.41
LINC00504-204ENST00000515031 BIVM-ERCC5R4GMW8 1640 aa12.5□□□□□ -0.41
LINC00504-204ENST00000515031 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
LINC00504-204ENST00000515031 MS4A3Q96HJ5 214 aa12.49□□□□□ -0.41
LINC00504-204ENST00000515031 GSE1Q14687 1217 aa12.47□□□□□ -0.41
LINC00504-204ENST00000515031 VPS8Q8N3P4 1428 aa12.46□□□□□ -0.41
LINC00504-204ENST00000515031 CCER1Q8TC90 406 aaPredicted RBP12.45□□□□□ -0.42
LINC00504-204ENST00000515031 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
LINC00504-204ENST00000515031 CLIP1P30622 1438 aa12.43□□□□□ -0.42
LINC00504-204ENST00000515031 POTEIP0CG38 1075 aa12.42□□□□□ -0.42
LINC00504-204ENST00000515031 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
LINC00504-204ENST00000515031 RGL2O15211 777 aa12.41□□□□□ -0.42
LINC00504-204ENST00000515031 NCAPD3P42695 1498 aa12.4□□□□□ -0.42
LINC00504-204ENST00000515031 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
LINC00504-204ENST00000515031 RUSC2Q8N2Y8 1516 aa12.4□□□□□ -0.42
LINC00504-204ENST00000515031 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
LINC00504-204ENST00000515031 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
LINC00504-204ENST00000515031 CLCN6P51797 869 aa12.38□□□□□ -0.43
LINC00504-204ENST00000515031 UBTFP17480 764 aaKnown RBP12.37□□□□□ -0.43
LINC00504-204ENST00000515031 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
LINC00504-204ENST00000515031 PRXQ9BXM0 1461 aa12.37□□□□□ -0.43
LINC00504-204ENST00000515031 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
LINC00504-204ENST00000515031 CENPBP07199 599 aaPredicted RBP12.33□□□□□ -0.44
LINC00504-204ENST00000515031 CHRM1P11229 460 aaPredicted RBP12.31□□□□□ -0.44
LINC00504-204ENST00000515031 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
LINC00504-204ENST00000515031 CFTRP13569 1480 aa12.29□□□□□ -0.44
LINC00504-204ENST00000515031 SGIP1Q9BQI5 828 aa12.29□□□□□ -0.44
LINC00504-204ENST00000515031 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
LINC00504-204ENST00000515031 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
LINC00504-204ENST00000515031 DIEXFQ68CQ4 756 aaKnown RBP12.28□□□□□ -0.44
LINC00504-204ENST00000515031 ACIN1Q9UKV3 1341 aaKnown RBP12.28□□□□□ -0.44
LINC00504-204ENST00000515031 MAP3K1Q13233 1512 aa12.27□□□□□ -0.44
LINC00504-204ENST00000515031 RNF25Q96BH1 459 aaPredicted RBP12.27□□□□□ -0.45
LINC00504-204ENST00000515031 KIF27Q86VH2 1401 aa12.27□□□□□ -0.45
LINC00504-204ENST00000515031 CUX2O14529 1486 aa12.27□□□□□ -0.45
LINC00504-204ENST00000515031 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
LINC00504-204ENST00000515031 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
LINC00504-204ENST00000515031 ATN1P54259 1190 aaPredicted RBP12.25□□□□□ -0.45
LINC00504-204ENST00000515031 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
LINC00504-204ENST00000515031 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms