RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 NUP160Q12769 1436 aa15.43■□□□□ 0.06
TRIM6-211ENST00000515022 ADAMTS12P58397 1594 aa15.43■□□□□ 0.06
TRIM6-211ENST00000515022 SHROOM2Q13796 1616 aa15.41■□□□□ 0.06
TRIM6-211ENST00000515022 FAM69CQ0P6D2 419 aa15.4■□□□□ 0.06
TRIM6-211ENST00000515022 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
TRIM6-211ENST00000515022 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
TRIM6-211ENST00000515022 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
TRIM6-211ENST00000515022 PRG4Q92954 1404 aaPredicted RBP15.37■□□□□ 0.05
TRIM6-211ENST00000515022 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
TRIM6-211ENST00000515022 WRNQ14191 1432 aaPredicted RBP eCLIP15.34■□□□□ 0.05
TRIM6-211ENST00000515022 TSPOAP1O95153 1857 aa15.33■□□□□ 0.04
TRIM6-211ENST00000515022 JPH4Q96JJ6 628 aa15.32■□□□□ 0.04
TRIM6-211ENST00000515022 ABCC10Q5T3U5 1492 aa15.32■□□□□ 0.04
TRIM6-211ENST00000515022 DIP2BQ9P265 1576 aa15.29■□□□□ 0.04
TRIM6-211ENST00000515022 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRIM6-211ENST00000515022 KDM6BO15054 1643 aa15.28■□□□□ 0.04
TRIM6-211ENST00000515022 ADCY10Q96PN6 1610 aa15.26■□□□□ 0.03
TRIM6-211ENST00000515022 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
TRIM6-211ENST00000515022 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
TRIM6-211ENST00000515022 BIVM-ERCC5R4GMW8 1640 aa15.24■□□□□ 0.03
TRIM6-211ENST00000515022 MAPKBP1O60336 1514 aa15.23■□□□□ 0.03
TRIM6-211ENST00000515022 RUSC2Q8N2Y8 1516 aa15.22■□□□□ 0.03
TRIM6-211ENST00000515022 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.03
TRIM6-211ENST00000515022 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
TRIM6-211ENST00000515022 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
TRIM6-211ENST00000515022 NCBP3Q53F19 620 aaKnown RBP15.12■□□□□ 0.01
TRIM6-211ENST00000515022 ADGRL1O94910 1474 aa15.12■□□□□ 0.01
TRIM6-211ENST00000515022 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
TRIM6-211ENST00000515022 KCNA4P22459 653 aa15.08■□□□□ 0
TRIM6-211ENST00000515022 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
TRIM6-211ENST00000515022 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
TRIM6-211ENST00000515022 PTPRGP23470 1445 aa15.06■□□□□ 0
TRIM6-211ENST00000515022 HECW2Q9P2P5 1572 aa15.06■□□□□ 0
TRIM6-211ENST00000515022 COL17A1Q9UMD9 1497 aaPredicted RBP15.04■□□□□ -0
TRIM6-211ENST00000515022 ASXL2Q76L83 1435 aa15.04■□□□□ -0
TRIM6-211ENST00000515022 IGF1RP08069 1367 aa15.02■□□□□ -0
TRIM6-211ENST00000515022 CUL7Q14999 1698 aa15.01□□□□□ -0.01
TRIM6-211ENST00000515022 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
TRIM6-211ENST00000515022 ABCC2Q92887 1545 aa15.01□□□□□ -0.01
TRIM6-211ENST00000515022 GLI2P10070 1586 aa14.98□□□□□ -0.01
TRIM6-211ENST00000515022 PLB1Q6P1J6 1458 aa14.98□□□□□ -0.01
TRIM6-211ENST00000515022 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
TRIM6-211ENST00000515022 CARMIL2Q6F5E8 1435 aa14.93□□□□□ -0.02
TRIM6-211ENST00000515022 EPRSP07814 1512 aaKnown RBP14.93□□□□□ -0.02
TRIM6-211ENST00000515022 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
TRIM6-211ENST00000515022 MAP3K4Q9Y6R4 1608 aa14.92□□□□□ -0.02
TRIM6-211ENST00000515022 UACAQ9BZF9 1416 aa14.91□□□□□ -0.02
TRIM6-211ENST00000515022 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
TRIM6-211ENST00000515022 UHRF1BP1LA0JNW5 1464 aa14.89□□□□□ -0.03
TRIM6-211ENST00000515022 IQGAP2Q13576 1575 aa14.88□□□□□ -0.03
TRIM6-211ENST00000515022 ZCCHC11Q5TAX3 1644 aaKnown RBP14.88□□□□□ -0.03
TRIM6-211ENST00000515022 TEX14Q8IWB6 1497 aa14.87□□□□□ -0.03
TRIM6-211ENST00000515022 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
TRIM6-211ENST00000515022 KDM5BQ9UGL1 1544 aa14.85□□□□□ -0.03
TRIM6-211ENST00000515022 FBXO41Q8TF61 875 aa14.84□□□□□ -0.03
TRIM6-211ENST00000515022 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
TRIM6-211ENST00000515022 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
TRIM6-211ENST00000515022 KIF21BO75037 1637 aa14.81□□□□□ -0.04
TRIM6-211ENST00000515022 WDR7Q9Y4E6 1490 aa14.79□□□□□ -0.04
TRIM6-211ENST00000515022 CD109Q6YHK3 1445 aa14.77□□□□□ -0.04
TRIM6-211ENST00000515022 RNF216Q9NWF9 866 aaPredicted RBP14.77□□□□□ -0.05
TRIM6-211ENST00000515022 KIAA0556O60303 1618 aa14.76□□□□□ -0.05
TRIM6-211ENST00000515022 UGGT2Q9NYU1 1516 aa14.76□□□□□ -0.05
TRIM6-211ENST00000515022 MAGI3Q5TCQ9 1506 aa14.72□□□□□ -0.05
TRIM6-211ENST00000515022 CFAP43Q8NDM7 1665 aa14.72□□□□□ -0.05
TRIM6-211ENST00000515022 ARID3CA6NKF2 412 aa14.72□□□□□ -0.05
TRIM6-211ENST00000515022 HOXD11P31277 338 aaPredicted RBP14.69□□□□□ -0.06
TRIM6-211ENST00000515022 PTPRMP28827 1452 aa14.69□□□□□ -0.06
TRIM6-211ENST00000515022 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
TRIM6-211ENST00000515022 ADAMTSL3P82987 1691 aa14.66□□□□□ -0.06
TRIM6-211ENST00000515022 ABCA8O94911 1581 aa14.65□□□□□ -0.06
TRIM6-211ENST00000515022 RAPGEF3O95398 923 aa14.65□□□□□ -0.06
TRIM6-211ENST00000515022 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
TRIM6-211ENST00000515022 ARAP3Q8WWN8 1544 aa14.62□□□□□ -0.07
TRIM6-211ENST00000515022 HSPA2P54652 639 aa14.61□□□□□ -0.07
TRIM6-211ENST00000515022 MADDQ8WXG6 1647 aa14.61□□□□□ -0.07
TRIM6-211ENST00000515022 LMTK3Q96Q04 1460 aa14.61□□□□□ -0.07
TRIM6-211ENST00000515022 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
TRIM6-211ENST00000515022 PCF11O94913 1555 aaKnown RBP14.6□□□□□ -0.07
TRIM6-211ENST00000515022 P3H3Q8IVL6 736 aa14.6□□□□□ -0.07
TRIM6-211ENST00000515022 BCORL1Q5H9F3 1711 aa14.59□□□□□ -0.07
TRIM6-211ENST00000515022 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
TRIM6-211ENST00000515022 RIMS1Q86UR5 1692 aaKnown RBP14.57□□□□□ -0.08
TRIM6-211ENST00000515022 ATP10BO94823 1461 aa14.55□□□□□ -0.08
TRIM6-211ENST00000515022 ILDR2Q71H61 639 aa14.54□□□□□ -0.08
TRIM6-211ENST00000515022 FRMPD1Q5SYB0 1578 aa14.54□□□□□ -0.08
TRIM6-211ENST00000515022 ABCA9Q8IUA7 1624 aa14.53□□□□□ -0.08
TRIM6-211ENST00000515022 CERKQ8TCT0 537 aa14.51□□□□□ -0.09
TRIM6-211ENST00000515022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.5□□□□□ -0.09
TRIM6-211ENST00000515022 HNRNPUL2Q1KMD3 747 aaKnown RBP14.5□□□□□ -0.09
TRIM6-211ENST00000515022 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
TRIM6-211ENST00000515022 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
TRIM6-211ENST00000515022 NEO1Q92859 1461 aa14.48□□□□□ -0.09
TRIM6-211ENST00000515022 MLECQ14165 292 aa14.47□□□□□ -0.09
TRIM6-211ENST00000515022 SIGLEC1Q9BZZ2 1709 aa14.46□□□□□ -0.1
TRIM6-211ENST00000515022 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.1
TRIM6-211ENST00000515022 RICTORQ6R327 1708 aa14.44□□□□□ -0.1
TRIM6-211ENST00000515022 SOCS7O14512 581 aa14.43□□□□□ -0.1
TRIM6-211ENST00000515022 RANGAP1P46060 587 aaPredicted RBP14.43□□□□□ -0.1
TRIM6-211ENST00000515022 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms